RNA–Protein interactions for RNA: ENST00000613988.4

CBWD1-223, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-223ENST00000613988 INSRP06213 1382 aa30.06■■■□□ 2.4
CBWD1-223ENST00000613988 SYTL4Q96C24 671 aaPredicted RBP30.05■■■□□ 2.4
CBWD1-223ENST00000613988 FLT4P35916 1363 aa30.05■■■□□ 2.4
CBWD1-223ENST00000613988 MEGF6O75095 1541 aa30.05■■■□□ 2.4
CBWD1-223ENST00000613988 RAPGEF4Q8WZA2 1011 aa30.04■■■□□ 2.4
CBWD1-223ENST00000613988 KIF24Q5T7B8 1368 aa30.04■■■□□ 2.4
CBWD1-223ENST00000613988 PRIM1P49642 420 aaKnown RBP30.03■■■□□ 2.4
CBWD1-223ENST00000613988 CGNL1Q0VF96 1302 aa30.03■■■□□ 2.4
CBWD1-223ENST00000613988 EIF4G2P78344 907 aaKnown RBP eCLIP30.02■■■□□ 2.4
CBWD1-223ENST00000613988 TATP17735 454 aaPredicted RBP30.01■■■□□ 2.39
CBWD1-223ENST00000613988 LRRC4BQ9NT99 713 aa30.01■■■□□ 2.39
CBWD1-223ENST00000613988 ATF5Q9Y2D1 282 aaPredicted RBP30.01■■■□□ 2.39
CBWD1-223ENST00000613988 EMILIN1Q9Y6C2 1016 aa30.01■■■□□ 2.39
CBWD1-223ENST00000613988 SHANK3Q9BYB0 1731 aa29.99■■■□□ 2.39
CBWD1-223ENST00000613988 PPM1GO15355 546 aaPredicted RBP29.99■■■□□ 2.39
CBWD1-223ENST00000613988 SLC27A3Q5K4L6 730 aa29.98■■■□□ 2.39
CBWD1-223ENST00000613988 DOT1LQ8TEK3 1739 aa29.97■■■□□ 2.39
CBWD1-223ENST00000613988 HSPA5P11021 654 aaKnown RBP29.97■■■□□ 2.39
CBWD1-223ENST00000613988 PAPPAQ13219 1627 aa29.96■■■□□ 2.39
CBWD1-223ENST00000613988 PTGER2P43116 358 aa29.96■■■□□ 2.39
CBWD1-223ENST00000613988 MTFR1LQ9H019 292 aa29.96■■■□□ 2.39
CBWD1-223ENST00000613988 ZNF827Q17R98 1081 aa29.94■■■□□ 2.38
CBWD1-223ENST00000613988 DCAF8L1A6NGE4 600 aa29.92■■■□□ 2.38
CBWD1-223ENST00000613988 NSD2O96028 1365 aa29.92■■■□□ 2.38
CBWD1-223ENST00000613988 WASHC2AQ641Q2 1341 aa29.91■■■□□ 2.38
CBWD1-223ENST00000613988 PCDH11XQ9BZA7 1347 aa29.91■■■□□ 2.38
CBWD1-223ENST00000613988 PCDH11YQ9BZA8 1340 aa29.91■■■□□ 2.38
CBWD1-223ENST00000613988 AKT1S1Q96B36 256 aa29.9■■■□□ 2.38
CBWD1-223ENST00000613988 MAP2P11137 1827 aaKnown RBP29.9■■■□□ 2.38
CBWD1-223ENST00000613988 KCNQ4P56696 695 aa29.9■■■□□ 2.38
CBWD1-223ENST00000613988 POLKQ9UBT6 870 aa29.89■■■□□ 2.37
CBWD1-223ENST00000613988 PANK3Q9H999 370 aa29.88■■■□□ 2.37
CBWD1-223ENST00000613988 TNNT2P45379 298 aaPredicted RBP29.87■■■□□ 2.37
CBWD1-223ENST00000613988 ANKRD26Q9UPS8 1709 aa29.86■■■□□ 2.37
CBWD1-223ENST00000613988 CCNL1Q9UK58 526 aaPredicted RBP29.86■■■□□ 2.37
CBWD1-223ENST00000613988 LY75O60449 1722 aa29.86■■■□□ 2.37
CBWD1-223ENST00000613988 SGIP1Q9BQI5 828 aa29.85■■■□□ 2.37
CBWD1-223ENST00000613988 TFCP2L1Q9NZI6 479 aa29.85■■■□□ 2.37
CBWD1-223ENST00000613988 CYP27B1O15528 508 aa29.84■■■□□ 2.37
CBWD1-223ENST00000613988 EYA1Q99502 592 aa29.83■■■□□ 2.37
CBWD1-223ENST00000613988 FHDC1Q9C0D6 1143 aaPredicted RBP29.82■■■□□ 2.36
CBWD1-223ENST00000613988 MPRIPQ6WCQ1 1025 aa29.81■■■□□ 2.36
CBWD1-223ENST00000613988 SLC16A10Q8TF71 515 aa29.81■■■□□ 2.36
CBWD1-223ENST00000613988 ARXQ96QS3 562 aa29.81■■■□□ 2.36
CBWD1-223ENST00000613988 SPG7Q9UQ90 795 aa29.81■■■□□ 2.36
CBWD1-223ENST00000613988 NCAPD2Q15021 1401 aa29.81■■■□□ 2.36
CBWD1-223ENST00000613988 SYT17Q9BSW7 474 aa29.8■■■□□ 2.36
CBWD1-223ENST00000613988 PNPLA7Q6ZV29 1317 aa29.8■■■□□ 2.36
CBWD1-223ENST00000613988 QSER1Q2KHR3 1735 aa29.79■■■□□ 2.36
CBWD1-223ENST00000613988 PKD1L3Q7Z443 1732 aa29.78■■■□□ 2.36
CBWD1-223ENST00000613988 YY1P25490 414 aa29.77■■■□□ 2.36
CBWD1-223ENST00000613988 EIF4A2Q14240 407 aaKnown RBP29.77■■■□□ 2.36
CBWD1-223ENST00000613988 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.76■■■□□ 2.351e-6■■■■□ 25.6
CBWD1-223ENST00000613988 NKX1-1Q15270 411 aaPredicted RBP29.75■■■□□ 2.35
CBWD1-223ENST00000613988 TUBGCP6Q96RT7 1819 aa29.74■■■□□ 2.35
CBWD1-223ENST00000613988 POLD1P28340 1107 aa29.74■■■□□ 2.35
CBWD1-223ENST00000613988 PALLDQ8WX93 1383 aa29.73■■■□□ 2.35
CBWD1-223ENST00000613988 ZNF316A6NFI3 1004 aaPredicted RBP29.73■■■□□ 2.35
CBWD1-223ENST00000613988 HMGB2P26583 209 aaKnown RBP29.73■■■□□ 2.35
CBWD1-223ENST00000613988 ITGB4P16144 1822 aa29.72■■■□□ 2.35
CBWD1-223ENST00000613988 MSH5O43196 834 aa29.72■■■□□ 2.35
CBWD1-223ENST00000613988 MORC1Q86VD1 984 aa29.72■■■□□ 2.35
CBWD1-223ENST00000613988 SMARCC1Q92922 1105 aaPredicted RBP29.72■■■□□ 2.35
CBWD1-223ENST00000613988 TOGARAM1Q9Y4F4 1720 aa29.72■■■□□ 2.35
CBWD1-223ENST00000613988 PIGBQ92521 554 aa29.71■■■□□ 2.35
CBWD1-223ENST00000613988 KNSTRNQ9Y448 316 aa29.71■■■□□ 2.35
CBWD1-223ENST00000613988 IFNL2Q8IZJ0 200 aa29.7■■■□□ 2.35
CBWD1-223ENST00000613988 COL23A1Q86Y22 540 aaPredicted RBP29.68■■■□□ 2.34
CBWD1-223ENST00000613988 UTRNP46939 3433 aa29.68■■■□□ 2.34
CBWD1-223ENST00000613988 C5P01031 1676 aa29.67■■■□□ 2.34
CBWD1-223ENST00000613988 PHKG2P15735 406 aa29.67■■■□□ 2.34
CBWD1-223ENST00000613988 MAP3K5Q99683 1374 aa29.66■■■□□ 2.34
CBWD1-223ENST00000613988 KLHL34Q8N239 644 aa29.66■■■□□ 2.34
CBWD1-223ENST00000613988 TMOD3Q9NYL9 352 aa29.66■■■□□ 2.34
CBWD1-223ENST00000613988 IGSF1Q8N6C5 1336 aa29.66■■■□□ 2.34
CBWD1-223ENST00000613988 COL24A1Q17RW2 1714 aa29.64■■■□□ 2.34
CBWD1-223ENST00000613988 TAF1LQ8IZX4 1826 aa29.63■■■□□ 2.33
CBWD1-223ENST00000613988 FLAD1Q8NFF5 587 aa29.63■■■□□ 2.33
CBWD1-223ENST00000613988 KIF7Q2M1P5 1343 aa29.62■■■□□ 2.33
CBWD1-223ENST00000613988 PLEKHG2Q9H7P9 1386 aa29.61■■■□□ 2.33
CBWD1-223ENST00000613988 PLEKHO1Q53GL0 409 aaPredicted RBP29.6■■■□□ 2.33
CBWD1-223ENST00000613988 AK7Q96M32 723 aa29.6■■■□□ 2.33
CBWD1-223ENST00000613988 LOC102724428A0A0B4J2F2 783 aa29.59■■■□□ 2.33
CBWD1-223ENST00000613988 SIK1P57059 783 aa29.59■■■□□ 2.33
CBWD1-223ENST00000613988 ASAP1Q9ULH1 1129 aa29.59■■■□□ 2.33
CBWD1-223ENST00000613988 MSL1Q68DK7 614 aa29.58■■■□□ 2.33
CBWD1-223ENST00000613988 C4BP0C0L5 1744 aa29.57■■■□□ 2.32
CBWD1-223ENST00000613988 AMER1Q5JTC6 1135 aaPredicted RBP29.57■■■□□ 2.32
CBWD1-223ENST00000613988 HSP90AB1P08238 724 aaKnown RBP29.56■■■□□ 2.32
CBWD1-223ENST00000613988 GPR162Q16538 588 aa29.56■■■□□ 2.32
CBWD1-223ENST00000613988 AMOTQ4VCS5 1084 aa29.55■■■□□ 2.32
CBWD1-223ENST00000613988 ERVV-2B6SEH9 535 aa29.54■■■□□ 2.32
CBWD1-223ENST00000613988 AEBP1Q8IUX7 1158 aa29.54■■■□□ 2.32
CBWD1-223ENST00000613988 DCAF5Q96JK2 942 aa29.54■■■□□ 2.32
CBWD1-223ENST00000613988 ATG3Q9NT62 314 aa29.54■■■□□ 2.32
CBWD1-223ENST00000613988 ATP6V1AP38606 617 aa29.53■■■□□ 2.32
CBWD1-223ENST00000613988 ZNF530Q6P9A1 599 aaPredicted RBP29.53■■■□□ 2.32
CBWD1-223ENST00000613988 PHF14O94880 888 aa29.52■■■□□ 2.32
CBWD1-223ENST00000613988 SULT6B1Q6IMI4 303 aa29.52■■■□□ 2.32
CBWD1-223ENST00000613988 LINC00116Q8NCU8 138 aa29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms