RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 SLIT2O94813 1529 aa17.99■□□□□ 0.47
TMEM254-213ENST00000613758 MEX3CQ5U5Q3 659 aaKnown RBP17.99■□□□□ 0.47
TMEM254-213ENST00000613758 USP35Q9P2H5 1018 aa17.99■□□□□ 0.47
TMEM254-213ENST00000613758 E9PSI1 815 aa17.98■□□□□ 0.47
TMEM254-213ENST00000613758 GNAT3A8MTJ3 354 aa17.98■□□□□ 0.47
TMEM254-213ENST00000613758 DCTN1Q14203 1278 aa17.98■□□□□ 0.47
TMEM254-213ENST00000613758 THUMPD2Q9BTF0 503 aaKnown RBP17.98■□□□□ 0.47
TMEM254-213ENST00000613758 SUPT16HQ9Y5B9 1047 aaKnown RBP17.98■□□□□ 0.47
TMEM254-213ENST00000613758 MEGF6O75095 1541 aa17.98■□□□□ 0.47
TMEM254-213ENST00000613758 HTATSF1O43719 755 aaKnown RBP17.97■□□□□ 0.47
TMEM254-213ENST00000613758 ZNF530Q6P9A1 599 aaPredicted RBP17.97■□□□□ 0.47
TMEM254-213ENST00000613758 RTF1Q92541 710 aaKnown RBP17.97■□□□□ 0.47
TMEM254-213ENST00000613758 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.97■□□□□ 0.47
TMEM254-213ENST00000613758 DLG5Q8TDM6 1919 aa17.97■□□□□ 0.47
TMEM254-213ENST00000613758 IL2RBP14784 551 aa17.97■□□□□ 0.47
TMEM254-213ENST00000613758 UNC5CLQ8IV45 518 aa17.97■□□□□ 0.47
TMEM254-213ENST00000613758 TRMT2AQ8IZ69 625 aaKnown RBP17.97■□□□□ 0.47
TMEM254-213ENST00000613758 FNBP4Q8N3X1 1017 aaPredicted RBP17.97■□□□□ 0.47
TMEM254-213ENST00000613758 FBXO41Q8TF61 875 aa17.97■□□□□ 0.47
TMEM254-213ENST00000613758 SPG7Q9UQ90 795 aa17.97■□□□□ 0.47
TMEM254-213ENST00000613758 CALD1Q05682 793 aaKnown RBP17.96■□□□□ 0.47
TMEM254-213ENST00000613758 MCM10Q7L590 875 aa17.96■□□□□ 0.47
TMEM254-213ENST00000613758 IL16Q14005 1332 aa17.96■□□□□ 0.47
TMEM254-213ENST00000613758 NWD2Q9ULI1 1742 aa17.96■□□□□ 0.47
TMEM254-213ENST00000613758 DUSP27Q5VZP5 1158 aa17.96■□□□□ 0.46
TMEM254-213ENST00000613758 MAP3K5Q99683 1374 aa17.95■□□□□ 0.46
TMEM254-213ENST00000613758 PLEKHG2Q9H7P9 1386 aa17.95■□□□□ 0.46
TMEM254-213ENST00000613758 AKAP4Q5JQC9 854 aa17.95■□□□□ 0.46
TMEM254-213ENST00000613758 C1orf141Q5JVX7 400 aa17.95■□□□□ 0.46
TMEM254-213ENST00000613758 NRAPQ86VF7 1730 aa17.95■□□□□ 0.46
TMEM254-213ENST00000613758 OVOS2A0A0G2JMS6 1433 aa17.94■□□□□ 0.46
TMEM254-213ENST00000613758 MYH16Q9H6N6 1097 aa17.94■□□□□ 0.46
TMEM254-213ENST00000613758 BCL9LQ86UU0 1499 aa17.93■□□□□ 0.46
TMEM254-213ENST00000613758 SPATA31A1Q5TZJ5 1347 aa17.93■□□□□ 0.46
TMEM254-213ENST00000613758 USP21Q9UK80 565 aa17.93■□□□□ 0.46
TMEM254-213ENST00000613758 CCDC9Q9Y3X0 531 aaKnown RBP17.93■□□□□ 0.46
TMEM254-213ENST00000613758 SPATA31A5Q5VU36 1347 aa17.93■□□□□ 0.46
TMEM254-213ENST00000613758 SPATA31A7Q8IWB4 1347 aa17.93■□□□□ 0.46
TMEM254-213ENST00000613758 IL17REQ8NFR9 667 aa17.93■□□□□ 0.46
TMEM254-213ENST00000613758 ZCRB1Q8TBF4 217 aaKnown RBP17.93■□□□□ 0.46
TMEM254-213ENST00000613758 FKBP8Q14318 412 aa17.92■□□□□ 0.46
TMEM254-213ENST00000613758 THRAP3Q9Y2W1 955 aaKnown RBP17.92■□□□□ 0.46
TMEM254-213ENST00000613758 LAS1LQ9Y4W2 734 aaKnown RBP17.92■□□□□ 0.46
TMEM254-213ENST00000613758 VPS72Q15906 364 aa17.91■□□□□ 0.46
TMEM254-213ENST00000613758 IFNL2Q8IZJ0 200 aa17.91■□□□□ 0.46
TMEM254-213ENST00000613758 IFT57Q9NWB7 429 aa17.91■□□□□ 0.46
TMEM254-213ENST00000613758 PHKG2P15735 406 aa17.9■□□□□ 0.46
TMEM254-213ENST00000613758 GNAI1P63096 354 aa17.9■□□□□ 0.46
TMEM254-213ENST00000613758 MPRIPQ6WCQ1 1025 aa17.9■□□□□ 0.46
TMEM254-213ENST00000613758 PARP4Q9UKK3 1724 aaKnown RBP17.9■□□□□ 0.46
TMEM254-213ENST00000613758 AFF2P51816 1311 aa17.9■□□□□ 0.46
TMEM254-213ENST00000613758 CYP27B1O15528 508 aa17.9■□□□□ 0.46
TMEM254-213ENST00000613758 ZNF853P0CG23 659 aa17.9■□□□□ 0.46
TMEM254-213ENST00000613758 TSR2Q969E8 191 aaKnown RBP17.9■□□□□ 0.46
TMEM254-213ENST00000613758 CFAP44Q96MT7 982 aa17.9■□□□□ 0.46
TMEM254-213ENST00000613758 LGR6Q9HBX8 967 aa17.9■□□□□ 0.46
TMEM254-213ENST00000613758 DISP2A7MBM2 1401 aa17.89■□□□□ 0.45
TMEM254-213ENST00000613758 RNMTO43148 476 aaKnown RBP17.89■□□□□ 0.45
TMEM254-213ENST00000613758 CDCA7Q9BWT1 371 aaPredicted RBP17.89■□□□□ 0.45
TMEM254-213ENST00000613758 PKD1L3Q7Z443 1732 aa17.88■□□□□ 0.45
TMEM254-213ENST00000613758 FANCIQ9NVI1 1328 aa17.88■□□□□ 0.45
TMEM254-213ENST00000613758 NEFLP07196 543 aa17.88■□□□□ 0.45
TMEM254-213ENST00000613758 PCDH11XQ9BZA7 1347 aa17.88■□□□□ 0.45
TMEM254-213ENST00000613758 PCDH11YQ9BZA8 1340 aa17.88■□□□□ 0.45
TMEM254-213ENST00000613758 BARGINQ6ZT62 677 aa17.87■□□□□ 0.45
TMEM254-213ENST00000613758 DDX54Q8TDD1 881 aaKnown RBP17.87■□□□□ 0.45
TMEM254-213ENST00000613758 CEMIPQ8WUJ3 1361 aa17.87■□□□□ 0.45
TMEM254-213ENST00000613758 CHL1O00533 1208 aa17.86■□□□□ 0.45
TMEM254-213ENST00000613758 HSP90AB1P08238 724 aaKnown RBP17.86■□□□□ 0.45
TMEM254-213ENST00000613758 MBIPQ9NS73 344 aa17.86■□□□□ 0.45
TMEM254-213ENST00000613758 RNF123Q5XPI4 1314 aa17.86■□□□□ 0.45
TMEM254-213ENST00000613758 EXOC5O00471 708 aa17.86■□□□□ 0.45
TMEM254-213ENST00000613758 TAF7Q15545 349 aaPredicted RBP17.86■□□□□ 0.45
TMEM254-213ENST00000613758 DCAF5Q96JK2 942 aa17.85■□□□□ 0.45
TMEM254-213ENST00000613758 TEFQ10587 303 aa17.84■□□□□ 0.45
TMEM254-213ENST00000613758 MIS18AQ9NYP9 233 aa17.84■□□□□ 0.45
TMEM254-213ENST00000613758 RCAN3Q9UKA8 241 aa17.84■□□□□ 0.45
TMEM254-213ENST00000613758 EXOSC9Q06265 439 aaKnown RBP17.84■□□□□ 0.45
TMEM254-213ENST00000613758 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.84■□□□□ 0.45
TMEM254-213ENST00000613758 FAM98CQ17RN3 349 aaKnown RBP17.83■□□□□ 0.45
TMEM254-213ENST00000613758 TRPC5Q9UL62 973 aaPredicted RBP17.83■□□□□ 0.45
TMEM254-213ENST00000613758 NKX1-1Q15270 411 aaPredicted RBP17.83■□□□□ 0.44
TMEM254-213ENST00000613758 TSPYL4Q9UJ04 414 aa17.83■□□□□ 0.44
TMEM254-213ENST00000613758 LRRC37A3O60309 1634 aa17.82■□□□□ 0.44
TMEM254-213ENST00000613758 KDM6AO15550 1401 aaPredicted RBP17.82■□□□□ 0.44
TMEM254-213ENST00000613758 GJD4Q96KN9 370 aaPredicted RBP17.82■□□□□ 0.44
TMEM254-213ENST00000613758 BABAM1Q9NWV8 329 aa17.82■□□□□ 0.44
TMEM254-213ENST00000613758 IRX6P78412 446 aaPredicted RBP17.81■□□□□ 0.44
TMEM254-213ENST00000613758 DDB1Q16531 1140 aa17.81■□□□□ 0.44
TMEM254-213ENST00000613758 WNK3Q9BYP7 1800 aa17.81■□□□□ 0.44
TMEM254-213ENST00000613758 QTRT2Q9H974 415 aaKnown RBP17.81■□□□□ 0.44
TMEM254-213ENST00000613758 ATRNO75882 1429 aa17.81■□□□□ 0.44
TMEM254-213ENST00000613758 ADAMTS7Q9UKP4 1686 aa17.8■□□□□ 0.44
TMEM254-213ENST00000613758 SHANK3Q9BYB0 1731 aa17.8■□□□□ 0.44
TMEM254-213ENST00000613758 SLC52A2Q9HAB3 445 aa17.8■□□□□ 0.44
TMEM254-213ENST00000613758 TNS2Q63HR2 1409 aa17.79■□□□□ 0.44
TMEM254-213ENST00000613758 BTBD11A6QL63 1104 aa17.79■□□□□ 0.44
TMEM254-213ENST00000613758 CT47B1P0C2W7 299 aaPredicted RBP17.79■□□□□ 0.44
TMEM254-213ENST00000613758 NFATC2IPQ8NCF5 419 aa17.79■□□□□ 0.44
TMEM254-213ENST00000613758 CABP4P57796 275 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms