RNA–Protein interactions for RNA: ENST00000613548.1

PCDH8-203, Transcript of protocadherin 8, humanhuman

TSL 2

Gene PCDH8, Length 744 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-203ENST00000613548 SOCS7O14512 581 aa20.76■□□□□ 0.91
PCDH8-203ENST00000613548 SCN11AQ9UI33 1791 aa20.76■□□□□ 0.91
PCDH8-203ENST00000613548 EYA1Q99502 592 aa20.75■□□□□ 0.91
PCDH8-203ENST00000613548 DDB1Q16531 1140 aa20.74■□□□□ 0.91
PCDH8-203ENST00000613548 DLG5Q8TDM6 1919 aa20.73■□□□□ 0.91
PCDH8-203ENST00000613548 IL13P35225 146 aa20.73■□□□□ 0.91
PCDH8-203ENST00000613548 ADAMTS7Q9UKP4 1686 aa20.73■□□□□ 0.91
PCDH8-203ENST00000613548 NUP188Q5SRE5 1749 aa20.71■□□□□ 0.91
PCDH8-203ENST00000613548 RALBP1Q15311 655 aa20.71■□□□□ 0.91
PCDH8-203ENST00000613548 RAPGEF4Q8WZA2 1011 aa20.7■□□□□ 0.9
PCDH8-203ENST00000613548 PDE3BQ13370 1112 aa20.69■□□□□ 0.9
PCDH8-203ENST00000613548 FAM182BQ5T319 152 aa20.69■□□□□ 0.9
PCDH8-203ENST00000613548 MYBBP1AQ9BQG0 1328 aaKnown RBP20.69■□□□□ 0.9
PCDH8-203ENST00000613548 LY75O60449 1722 aa20.69■□□□□ 0.9
PCDH8-203ENST00000613548 DIAPH1O60610 1272 aaKnown RBP20.68■□□□□ 0.9
PCDH8-203ENST00000613548 MARCH10Q8NA82 808 aaPredicted RBP20.68■□□□□ 0.9
PCDH8-203ENST00000613548 UPF1Q92900 1129 aaKnown RBP eCLIP20.68■□□□□ 0.9
PCDH8-203ENST00000613548 TATP17735 454 aaPredicted RBP20.67■□□□□ 0.9
PCDH8-203ENST00000613548 AEBP1Q8IUX7 1158 aa20.67■□□□□ 0.9
PCDH8-203ENST00000613548 PRKRIP1Q9H875 184 aaPredicted RBP20.67■□□□□ 0.9
PCDH8-203ENST00000613548 SIPA1L3O60292 1781 aaPredicted RBP20.67■□□□□ 0.9
PCDH8-203ENST00000613548 EXOC5O00471 708 aa20.66■□□□□ 0.9
PCDH8-203ENST00000613548 CFAP53Q96M91 514 aa20.66■□□□□ 0.9
PCDH8-203ENST00000613548 PCDH11XQ9BZA7 1347 aa20.66■□□□□ 0.9
PCDH8-203ENST00000613548 PCDH11YQ9BZA8 1340 aa20.66■□□□□ 0.9
PCDH8-203ENST00000613548 FAM196AQ6ZSG2 479 aa20.64■□□□□ 0.89
PCDH8-203ENST00000613548 PAPPAQ13219 1627 aa20.64■□□□□ 0.89
PCDH8-203ENST00000613548 ZCRB1Q8TBF4 217 aaKnown RBP20.63■□□□□ 0.89
PCDH8-203ENST00000613548 SULT6B1Q6IMI4 303 aa20.62■□□□□ 0.89
PCDH8-203ENST00000613548 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.62■□□□□ 0.89
PCDH8-203ENST00000613548 TAF1LQ8IZX4 1826 aa20.61■□□□□ 0.89
PCDH8-203ENST00000613548 MRC1P22897 1456 aa20.61■□□□□ 0.89
PCDH8-203ENST00000613548 CYP27B1O15528 508 aa20.59■□□□□ 0.89
PCDH8-203ENST00000613548 KDM6AO15550 1401 aaPredicted RBP20.59■□□□□ 0.89
PCDH8-203ENST00000613548 HMOX1P09601 288 aa20.58■□□□□ 0.89
PCDH8-203ENST00000613548 CCDC125Q86Z20 511 aa20.58■□□□□ 0.89
PCDH8-203ENST00000613548 CICQ96RK0 1608 aaPredicted RBP20.57■□□□□ 0.88
PCDH8-203ENST00000613548 UBR2Q8IWV8 1755 aa20.57■□□□□ 0.88
PCDH8-203ENST00000613548 U2SURPO15042 1029 aaKnown RBP20.57■□□□□ 0.88
PCDH8-203ENST00000613548 SPG7Q9UQ90 795 aa20.57■□□□□ 0.88
PCDH8-203ENST00000613548 TUBGCP6Q96RT7 1819 aa20.57■□□□□ 0.88
PCDH8-203ENST00000613548 TRIM37O94972 964 aa20.56■□□□□ 0.88
PCDH8-203ENST00000613548 DDX54Q8TDD1 881 aaKnown RBP20.56■□□□□ 0.88
PCDH8-203ENST00000613548 RSPH6AQ9H0K4 717 aa20.56■□□□□ 0.88
PCDH8-203ENST00000613548 C5P01031 1676 aa20.56■□□□□ 0.88
PCDH8-203ENST00000613548 ZNF831Q5JPB2 1677 aa20.55■□□□□ 0.88
PCDH8-203ENST00000613548 NUDCQ9Y266 331 aa20.55■□□□□ 0.88
PCDH8-203ENST00000613548 QSER1Q2KHR3 1735 aa20.53■□□□□ 0.88
PCDH8-203ENST00000613548 PHKG2P15735 406 aa20.53■□□□□ 0.88
PCDH8-203ENST00000613548 AMOTQ4VCS5 1084 aa20.53■□□□□ 0.88
PCDH8-203ENST00000613548 COL5A3P25940 1745 aaPredicted RBP20.53■□□□□ 0.88
PCDH8-203ENST00000613548 NKX1-1Q15270 411 aaPredicted RBP20.52■□□□□ 0.88
PCDH8-203ENST00000613548 PLEKHO1Q53GL0 409 aaPredicted RBP20.52■□□□□ 0.88
PCDH8-203ENST00000613548 ZNF530Q6P9A1 599 aaPredicted RBP20.52■□□□□ 0.88
PCDH8-203ENST00000613548 PTF1AQ7RTS3 328 aa20.52■□□□□ 0.88
PCDH8-203ENST00000613548 U2AF1L5P0DN76 240 aaPredicted RBP20.51■□□□□ 0.87
PCDH8-203ENST00000613548 U2AF1Q01081 240 aaKnown RBP eCLIP20.51■□□□□ 0.87
PCDH8-203ENST00000613548 IFNL2Q8IZJ0 200 aa20.51■□□□□ 0.87
PCDH8-203ENST00000613548 BCL11BQ9C0K0 894 aaPredicted RBP20.51■□□□□ 0.87
PCDH8-203ENST00000613548 PRKAR2BP31323 418 aa20.5■□□□□ 0.87
PCDH8-203ENST00000613548 SF3B2Q13435 895 aaKnown RBP20.5■□□□□ 0.87
PCDH8-203ENST00000613548 ACSBG1Q96GR2 724 aa20.5■□□□□ 0.87
PCDH8-203ENST00000613548 ANP32CO43423 234 aa20.49■□□□□ 0.87
PCDH8-203ENST00000613548 KCNQ2O43526 872 aa20.49■□□□□ 0.87
PCDH8-203ENST00000613548 BAG6P46379 1132 aa20.49■□□□□ 0.87
PCDH8-203ENST00000613548 TJP1Q07157 1748 aa20.49■□□□□ 0.87
PCDH8-203ENST00000613548 KDM3BQ7LBC6 1761 aa20.49■□□□□ 0.87
PCDH8-203ENST00000613548 MAP3K5Q99683 1374 aa20.48■□□□□ 0.87
PCDH8-203ENST00000613548 DEFB132Q7Z7B7 95 aa20.48■□□□□ 0.87
PCDH8-203ENST00000613548 FCHSD2O94868 740 aa20.47■□□□□ 0.87
PCDH8-203ENST00000613548 MTHFSDQ2M296 383 aaKnown RBP20.46■□□□□ 0.87
PCDH8-203ENST00000613548 APBA3O96018 575 aa20.45■□□□□ 0.86
PCDH8-203ENST00000613548 HSP90AB1P08238 724 aaKnown RBP20.45■□□□□ 0.86
PCDH8-203ENST00000613548 C1orf141Q5JVX7 400 aa20.45■□□□□ 0.86
PCDH8-203ENST00000613548 CASZ1Q86V15 1759 aa20.44■□□□□ 0.86
PCDH8-203ENST00000613548 UBR3Q6ZT12 1888 aa20.44■□□□□ 0.86
PCDH8-203ENST00000613548 AKAP4Q5JQC9 854 aa20.44■□□□□ 0.86
PCDH8-203ENST00000613548 GAS2L2Q8NHY3 880 aa20.44■□□□□ 0.86
PCDH8-203ENST00000613548 DCAF5Q96JK2 942 aa20.44■□□□□ 0.86
PCDH8-203ENST00000613548 PRIM1P49642 420 aaKnown RBP20.43■□□□□ 0.86
PCDH8-203ENST00000613548 EN1Q05925 392 aaPredicted RBP20.43■□□□□ 0.86
PCDH8-203ENST00000613548 CCDC184Q52MB2 194 aa20.43■□□□□ 0.86
PCDH8-203ENST00000613548 PHACTR3Q96KR7 559 aa20.43■□□□□ 0.86
PCDH8-203ENST00000613548 CAMKK2Q96RR4 588 aa20.43■□□□□ 0.86
PCDH8-203ENST00000613548 PLEKHF1Q96S99 279 aa20.43■□□□□ 0.86
PCDH8-203ENST00000613548 LAMB4A4D0S4 1761 aa20.43■□□□□ 0.86
PCDH8-203ENST00000613548 C4BP0C0L5 1744 aa20.42■□□□□ 0.86
PCDH8-203ENST00000613548 PLSCR1O15162 318 aa20.42■□□□□ 0.86
PCDH8-203ENST00000613548 SYTL4Q96C24 671 aaPredicted RBP20.42■□□□□ 0.86
PCDH8-203ENST00000613548 CEMIPQ8WUJ3 1361 aa20.41■□□□□ 0.86
PCDH8-203ENST00000613548 KCPQ6ZWJ8 1503 aa20.41■□□□□ 0.86
PCDH8-203ENST00000613548 WDR43Q15061 677 aaKnown RBP eCLIP20.4■□□□□ 0.86
PCDH8-203ENST00000613548 EZH2Q15910 746 aaKnown RBP20.4■□□□□ 0.86
PCDH8-203ENST00000613548 PALLDQ8WX93 1383 aa20.39■□□□□ 0.85
PCDH8-203ENST00000613548 MPRIPQ6WCQ1 1025 aa20.39■□□□□ 0.85
PCDH8-203ENST00000613548 MYH14Q7Z406 1995 aaKnown RBP20.38■□□□□ 0.85
PCDH8-203ENST00000613548 ERVV-2B6SEH9 535 aa20.38■□□□□ 0.85
PCDH8-203ENST00000613548 TMOD3Q9NYL9 352 aa20.38■□□□□ 0.85
PCDH8-203ENST00000613548 MAPK8IP3Q9UPT6 1336 aa20.37■□□□□ 0.85
PCDH8-203ENST00000613548 PIGBQ92521 554 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms