RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 NHSQ6T4R5 1651 aa17.34■□□□□ 0.37
CSTF1-208ENST00000613138 DOT1LQ8TEK3 1739 aa17.34■□□□□ 0.37
CSTF1-208ENST00000613138 EYA1Q99502 592 aa17.34■□□□□ 0.37
CSTF1-208ENST00000613138 BTAF1O14981 1849 aa17.33■□□□□ 0.37
CSTF1-208ENST00000613138 PSDA5PKW4 1024 aaPredicted RBP17.32■□□□□ 0.36
CSTF1-208ENST00000613138 NCAPD2Q15021 1401 aa17.3■□□□□ 0.36
CSTF1-208ENST00000613138 PKD1L3Q7Z443 1732 aa17.3■□□□□ 0.36
CSTF1-208ENST00000613138 ZCRB1Q8TBF4 217 aaKnown RBP17.3■□□□□ 0.36
CSTF1-208ENST00000613138 BCL9O00512 1426 aa17.3■□□□□ 0.36
CSTF1-208ENST00000613138 BCL11BQ9C0K0 894 aaPredicted RBP17.29■□□□□ 0.36
CSTF1-208ENST00000613138 TOGARAM1Q9Y4F4 1720 aa17.29■□□□□ 0.36
CSTF1-208ENST00000613138 TATP17735 454 aaPredicted RBP17.28■□□□□ 0.36
CSTF1-208ENST00000613138 RAPGEF4Q8WZA2 1011 aa17.28■□□□□ 0.36
CSTF1-208ENST00000613138 SRCAPQ6ZRS2 3230 aa17.28■□□□□ 0.36
CSTF1-208ENST00000613138 AEBP1Q8IUX7 1158 aa17.27■□□□□ 0.36
CSTF1-208ENST00000613138 PROM2Q8N271 834 aa17.27■□□□□ 0.36
CSTF1-208ENST00000613138 RGPD3A6NKT7 1758 aaPredicted RBP17.27■□□□□ 0.35
CSTF1-208ENST00000613138 RGPD4Q7Z3J3 1758 aa17.27■□□□□ 0.35
CSTF1-208ENST00000613138 CYP27B1O15528 508 aa17.26■□□□□ 0.35
CSTF1-208ENST00000613138 MTHFSP49914 203 aa17.26■□□□□ 0.35
CSTF1-208ENST00000613138 ITGB4P16144 1822 aa17.26■□□□□ 0.35
CSTF1-208ENST00000613138 R3HDM1Q15032 1099 aaKnown RBP17.25■□□□□ 0.35
CSTF1-208ENST00000613138 IGSF1Q8N6C5 1336 aa17.24■□□□□ 0.35
CSTF1-208ENST00000613138 PRIM1P49642 420 aaKnown RBP17.24■□□□□ 0.35
CSTF1-208ENST00000613138 SYTL4Q96C24 671 aaPredicted RBP17.24■□□□□ 0.35
CSTF1-208ENST00000613138 IL13P35225 146 aa17.23■□□□□ 0.35
CSTF1-208ENST00000613138 ANO8Q9HCE9 1232 aaPredicted RBP17.23■□□□□ 0.35
CSTF1-208ENST00000613138 KCNQ4P56696 695 aa17.22■□□□□ 0.35
CSTF1-208ENST00000613138 NPC1L1Q9UHC9 1359 aa17.22■□□□□ 0.35
CSTF1-208ENST00000613138 COL3A1P02461 1466 aaPredicted RBP17.21■□□□□ 0.35
CSTF1-208ENST00000613138 PLSCR1O15162 318 aa17.21■□□□□ 0.35
CSTF1-208ENST00000613138 PCDH11XQ9BZA7 1347 aa17.21■□□□□ 0.34
CSTF1-208ENST00000613138 PCDH11YQ9BZA8 1340 aa17.21■□□□□ 0.34
CSTF1-208ENST00000613138 PARD3Q8TEW0 1356 aa17.2■□□□□ 0.34
CSTF1-208ENST00000613138 TXNRD1Q16881 649 aa17.2■□□□□ 0.34
CSTF1-208ENST00000613138 SULT6B1Q6IMI4 303 aa17.19■□□□□ 0.34
CSTF1-208ENST00000613138 LY75O60449 1722 aa17.18■□□□□ 0.34
CSTF1-208ENST00000613138 HMOX1P09601 288 aa17.18■□□□□ 0.34
CSTF1-208ENST00000613138 PDGFDQ9GZP0 370 aaPredicted RBP17.18■□□□□ 0.34
CSTF1-208ENST00000613138 LRRC4BQ9NT99 713 aa17.18■□□□□ 0.34
CSTF1-208ENST00000613138 VIRMAQ69YN4 1812 aaKnown RBP17.18■□□□□ 0.34
CSTF1-208ENST00000613138 DDX10Q13206 875 aaKnown RBP17.17■□□□□ 0.34
CSTF1-208ENST00000613138 TUBGCP6Q96RT7 1819 aa17.17■□□□□ 0.34
CSTF1-208ENST00000613138 PAPPAQ13219 1627 aa17.16■□□□□ 0.34
CSTF1-208ENST00000613138 PHKG2P15735 406 aa17.15■□□□□ 0.34
CSTF1-208ENST00000613138 PPP2R1AP30153 589 aa17.15■□□□□ 0.34
CSTF1-208ENST00000613138 SPG7Q9UQ90 795 aa17.15■□□□□ 0.34
CSTF1-208ENST00000613138 DIAPH1O60610 1272 aaKnown RBP17.14■□□□□ 0.33
CSTF1-208ENST00000613138 MPRIPQ6WCQ1 1025 aa17.14■□□□□ 0.33
CSTF1-208ENST00000613138 KDRP35968 1356 aa17.14■□□□□ 0.33
CSTF1-208ENST00000613138 CASZ1Q86V15 1759 aa17.13■□□□□ 0.33
CSTF1-208ENST00000613138 ZNF827Q17R98 1081 aa17.13■□□□□ 0.33
CSTF1-208ENST00000613138 ZNF530Q6P9A1 599 aaPredicted RBP17.13■□□□□ 0.33
CSTF1-208ENST00000613138 NKX1-1Q15270 411 aaPredicted RBP17.12■□□□□ 0.33
CSTF1-208ENST00000613138 NBPF14Q5TI25 921 aa17.12■□□□□ 0.33
CSTF1-208ENST00000613138 PIGBQ92521 554 aa17.12■□□□□ 0.33
CSTF1-208ENST00000613138 TAF1LQ8IZX4 1826 aa17.12■□□□□ 0.33
CSTF1-208ENST00000613138 KDM6AO15550 1401 aaPredicted RBP17.12■□□□□ 0.33
CSTF1-208ENST00000613138 U2SURPO15042 1029 aaKnown RBP17.11■□□□□ 0.33
CSTF1-208ENST00000613138 IFNL2Q8IZJ0 200 aa17.11■□□□□ 0.33
CSTF1-208ENST00000613138 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.11■□□□□ 0.33
CSTF1-208ENST00000613138 SCN11AQ9UI33 1791 aa17.1■□□□□ 0.33
CSTF1-208ENST00000613138 PLEKHO1Q53GL0 409 aaPredicted RBP17.1■□□□□ 0.33
CSTF1-208ENST00000613138 LRP5O75197 1615 aa17.1■□□□□ 0.33
CSTF1-208ENST00000613138 C5P01031 1676 aa17.08■□□□□ 0.32
CSTF1-208ENST00000613138 PALLDQ8WX93 1383 aa17.08■□□□□ 0.32
CSTF1-208ENST00000613138 ASAP1Q9ULH1 1129 aa17.08■□□□□ 0.32
CSTF1-208ENST00000613138 SLC15A2Q16348 729 aa17.07■□□□□ 0.32
CSTF1-208ENST00000613138 STK32BQ9NY57 414 aa17.07■□□□□ 0.32
CSTF1-208ENST00000613138 CCNL1Q9UK58 526 aaPredicted RBP17.07■□□□□ 0.32
CSTF1-208ENST00000613138 MTHFSDQ2M296 383 aaKnown RBP17.06■□□□□ 0.32
CSTF1-208ENST00000613138 SMIM5Q71RC9 77 aa17.06■□□□□ 0.32
CSTF1-208ENST00000613138 ZBTB7AO95365 584 aa17.05■□□□□ 0.32
CSTF1-208ENST00000613138 ZEB1P37275 1124 aaPredicted RBP17.05■□□□□ 0.32
CSTF1-208ENST00000613138 AMOTQ4VCS5 1084 aa17.05■□□□□ 0.32
CSTF1-208ENST00000613138 AKT1S1Q96B36 256 aa17.05■□□□□ 0.32
CSTF1-208ENST00000613138 LGR6Q9HBX8 967 aa17.05■□□□□ 0.32
CSTF1-208ENST00000613138 TMOD3Q9NYL9 352 aa17.05■□□□□ 0.32
CSTF1-208ENST00000613138 PHACTR3Q96KR7 559 aa17.04■□□□□ 0.32
CSTF1-208ENST00000613138 ATG3Q9NT62 314 aa17.04■□□□□ 0.32
CSTF1-208ENST00000613138 C1orf141Q5JVX7 400 aa17.03■□□□□ 0.32
CSTF1-208ENST00000613138 SLC27A3Q5K4L6 730 aa17.03■□□□□ 0.32
CSTF1-208ENST00000613138 DCAF5Q96JK2 942 aa17.03■□□□□ 0.32
CSTF1-208ENST00000613138 CFAP53Q96M91 514 aa17.03■□□□□ 0.32
CSTF1-208ENST00000613138 QSER1Q2KHR3 1735 aa17.03■□□□□ 0.32
CSTF1-208ENST00000613138 PLEKHG2Q9H7P9 1386 aa17.02■□□□□ 0.32
CSTF1-208ENST00000613138 PRKAR2BP31323 418 aa17.02■□□□□ 0.32
CSTF1-208ENST00000613138 AMIGO3Q86WK7 504 aa17.02■□□□□ 0.32
CSTF1-208ENST00000613138 RSPH6AQ9H0K4 717 aa17.02■□□□□ 0.32
CSTF1-208ENST00000613138 ATF5Q9Y2D1 282 aaPredicted RBP17.02■□□□□ 0.32
CSTF1-208ENST00000613138 C4BP0C0L5 1744 aa17.01■□□□□ 0.31
CSTF1-208ENST00000613138 U2AF1L5P0DN76 240 aaPredicted RBP17.01■□□□□ 0.31
CSTF1-208ENST00000613138 U2AF1Q01081 240 aaKnown RBP eCLIP17.01■□□□□ 0.31
CSTF1-208ENST00000613138 ITPK1Q13572 414 aa17.01■□□□□ 0.31
CSTF1-208ENST00000613138 SLC4A9Q96Q91 983 aa17.01■□□□□ 0.31
CSTF1-208ENST00000613138 ADAMTS7Q9UKP4 1686 aa17.01■□□□□ 0.31
CSTF1-208ENST00000613138 PNPLA7Q6ZV29 1317 aa17■□□□□ 0.31
CSTF1-208ENST00000613138 CABP4P57796 275 aa17■□□□□ 0.31
CSTF1-208ENST00000613138 AKAP4Q5JQC9 854 aa17■□□□□ 0.31
CSTF1-208ENST00000613138 UBR3Q6ZT12 1888 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms