RNA–Protein interactions for RNA: ENST00000612438.1

LINC00547-201, long intergenic non-protein coding RNA 547, humanhuman

TSL 2 BASIC

Gene LINC00547, Length 3,314 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00547-201ENST00000612438 K7ELQ4 463 aaPredicted RBP10.7□□□□□ -0.7
LINC00547-201ENST00000612438 SAFB2Q14151 953 aaKnown RBP eCLIP10.7□□□□□ -0.7
LINC00547-201ENST00000612438 PPIP5K1Q6PFW1 1433 aa10.7□□□□□ -0.7
LINC00547-201ENST00000612438 CFAP65Q6ZU64 1925 aaKnown RBP10.7□□□□□ -0.7
LINC00547-201ENST00000612438 MED14O60244 1454 aa10.7□□□□□ -0.7
LINC00547-201ENST00000612438 TULP2O00295 520 aa10.69□□□□□ -0.7
LINC00547-201ENST00000612438 SRPK2P78362 688 aaKnown RBP10.69□□□□□ -0.7
LINC00547-201ENST00000612438 TBC1D9Q6ZT07 1266 aa10.69□□□□□ -0.7
LINC00547-201ENST00000612438 CALCOCO1Q9P1Z2 691 aa10.69□□□□□ -0.7
LINC00547-201ENST00000612438 FCHSD2O94868 740 aa10.69□□□□□ -0.7
LINC00547-201ENST00000612438 CLEC17AQ6ZS10 378 aa10.69□□□□□ -0.7
LINC00547-201ENST00000612438 PDCL2Q8N4E4 241 aa10.69□□□□□ -0.7
LINC00547-201ENST00000612438 TERF2IPQ9NYB0 399 aa10.69□□□□□ -0.7
LINC00547-201ENST00000612438 ARHGAP45Q92619 1136 aa10.69□□□□□ -0.7
LINC00547-201ENST00000612438 FEZ1Q99689 392 aa10.69□□□□□ -0.7
LINC00547-201ENST00000612438 FBXO3Q9UK99 471 aa10.69□□□□□ -0.7
LINC00547-201ENST00000612438 CFAP74Q9C0B2 1584 aa10.68□□□□□ -0.7
LINC00547-201ENST00000612438 ZBTB9Q96C00 473 aa10.68□□□□□ -0.7
LINC00547-201ENST00000612438 TNNT3P45378 269 aaPredicted RBP10.68□□□□□ -0.7
LINC00547-201ENST00000612438 MRPL50Q8N5N7 158 aaKnown RBP10.68□□□□□ -0.7
LINC00547-201ENST00000612438 RBM42Q9BTD8 480 aaKnown RBP10.68□□□□□ -0.7
LINC00547-201ENST00000612438 FOXD4L1Q9NU39 408 aa10.68□□□□□ -0.7
LINC00547-201ENST00000612438 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.68□□□□□ -0.7
LINC00547-201ENST00000612438 PIK3R4Q99570 1358 aa10.68□□□□□ -0.7
LINC00547-201ENST00000612438 VAMP4O75379 141 aa10.68□□□□□ -0.7
LINC00547-201ENST00000612438 PHF14O94880 888 aa10.68□□□□□ -0.7
LINC00547-201ENST00000612438 GTF2F1P35269 517 aaKnown RBP eCLIP10.68□□□□□ -0.7
LINC00547-201ENST00000612438 ATAD2Q6PL18 1390 aa10.67□□□□□ -0.7
LINC00547-201ENST00000612438 SIRT2Q8IXJ6 389 aa10.67□□□□□ -0.7
LINC00547-201ENST00000612438 GAS2L2Q8NHY3 880 aa10.67□□□□□ -0.7
LINC00547-201ENST00000612438 NEXMIFQ5QGS0 1516 aa10.67□□□□□ -0.7
LINC00547-201ENST00000612438 CAMSAP1Q5T5Y3 1602 aa10.67□□□□□ -0.7
LINC00547-201ENST00000612438 SSFA2P28290 1259 aa10.67□□□□□ -0.7
LINC00547-201ENST00000612438 STK26Q9P289 416 aa10.67□□□□□ -0.7
LINC00547-201ENST00000612438 FRMPD1Q5SYB0 1578 aa10.67□□□□□ -0.7
LINC00547-201ENST00000612438 CAPN2P17655 700 aa10.66□□□□□ -0.7
LINC00547-201ENST00000612438 C1orf115Q9H7X2 142 aa10.66□□□□□ -0.7
LINC00547-201ENST00000612438 CD163L1Q9NR16 1453 aa10.66□□□□□ -0.7
LINC00547-201ENST00000612438 ABCC3O15438 1527 aa10.66□□□□□ -0.7
LINC00547-201ENST00000612438 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.66□□□□□ -0.7
LINC00547-201ENST00000612438 LOC102724159A0A0B4J2E5 919 aa10.66□□□□□ -0.7
LINC00547-201ENST00000612438 GOLGA6L22H0YM25 854 aa10.66□□□□□ -0.7
LINC00547-201ENST00000612438 LMOD3Q0VAK6 560 aa10.66□□□□□ -0.7
LINC00547-201ENST00000612438 PWP2Q15269 919 aaKnown RBP10.66□□□□□ -0.7
LINC00547-201ENST00000612438 OGFRQ9NZT2 677 aa10.66□□□□□ -0.7
LINC00547-201ENST00000612438 HECW2Q9P2P5 1572 aa10.66□□□□□ -0.7
LINC00547-201ENST00000612438 PTCH1Q13635 1447 aa10.66□□□□□ -0.7
LINC00547-201ENST00000612438 TMED8Q6PL24 325 aaPredicted RBP10.66□□□□□ -0.7
LINC00547-201ENST00000612438 CARD10Q9BWT7 1032 aa10.66□□□□□ -0.7
LINC00547-201ENST00000612438 CDC45O75419 566 aa10.65□□□□□ -0.7
LINC00547-201ENST00000612438 PRKAR2BP31323 418 aa10.65□□□□□ -0.7
LINC00547-201ENST00000612438 KLHL40Q2TBA0 621 aa10.65□□□□□ -0.7
LINC00547-201ENST00000612438 PIK3C2BO00750 1634 aa10.65□□□□□ -0.7
LINC00547-201ENST00000612438 MLH3Q9UHC1 1453 aa10.65□□□□□ -0.7
LINC00547-201ENST00000612438 IBTKQ9P2D0 1353 aaPredicted RBP10.65□□□□□ -0.7
LINC00547-201ENST00000612438 BAG4O95429 457 aaKnown RBP10.65□□□□□ -0.7
LINC00547-201ENST00000612438 MCCP23508 829 aa10.65□□□□□ -0.7
LINC00547-201ENST00000612438 CCDC39Q9UFE4 941 aa10.65□□□□□ -0.7
LINC00547-201ENST00000612438 ZFYVE9O95405 1425 aa10.65□□□□□ -0.71
LINC00547-201ENST00000612438 ANKRD26Q9UPS8 1709 aa10.65□□□□□ -0.71
LINC00547-201ENST00000612438 ABCC4O15439 1325 aa10.65□□□□□ -0.71
LINC00547-201ENST00000612438 TSPYL6Q8N831 410 aa10.64□□□□□ -0.71
LINC00547-201ENST00000612438 FAM135BQ49AJ0 1406 aa10.64□□□□□ -0.71
LINC00547-201ENST00000612438 NFE2L2Q16236 605 aa10.64□□□□□ -0.71
LINC00547-201ENST00000612438 HDGFL2Q7Z4V5 671 aaPredicted RBP10.64□□□□□ -0.71
LINC00547-201ENST00000612438 BANK1Q8NDB2 785 aa10.64□□□□□ -0.71
LINC00547-201ENST00000612438 ARHGAP31Q2M1Z3 1444 aa10.64□□□□□ -0.71
LINC00547-201ENST00000612438 CDC42BPGQ6DT37 1551 aa10.64□□□□□ -0.71
LINC00547-201ENST00000612438 MINK1Q8N4C8 1332 aaPredicted RBP10.64□□□□□ -0.71
LINC00547-201ENST00000612438 TICAM2Q86XR7 235 aa10.64□□□□□ -0.71
LINC00547-201ENST00000612438 DDX49Q9Y6V7 483 aaKnown RBP10.64□□□□□ -0.71
LINC00547-201ENST00000612438 IDI1Q13907 227 aa10.63□□□□□ -0.71
LINC00547-201ENST00000612438 PDLIM2Q96JY6 352 aa10.63□□□□□ -0.71
LINC00547-201ENST00000612438 PHACTR3Q96KR7 559 aa10.63□□□□□ -0.71
LINC00547-201ENST00000612438 POGZQ7Z3K3 1410 aa10.63□□□□□ -0.71
LINC00547-201ENST00000612438 REREQ9P2R6 1566 aa10.63□□□□□ -0.71
LINC00547-201ENST00000612438 LRRC7Q96NW7 1537 aa10.63□□□□□ -0.71
LINC00547-201ENST00000612438 ZNF853P0CG23 659 aa10.63□□□□□ -0.71
LINC00547-201ENST00000612438 GSPT1P15170 499 aaKnown RBP10.63□□□□□ -0.71
LINC00547-201ENST00000612438 GNAI1P63096 354 aa10.63□□□□□ -0.71
LINC00547-201ENST00000612438 RABEP1Q15276 862 aa10.63□□□□□ -0.71
LINC00547-201ENST00000612438 PRAM1Q96QH2 718 aa10.63□□□□□ -0.71
LINC00547-201ENST00000612438 IFT57Q9NWB7 429 aa10.63□□□□□ -0.71
LINC00547-201ENST00000612438 CCDC9Q9Y3X0 531 aaKnown RBP10.63□□□□□ -0.71
LINC00547-201ENST00000612438 PTPRMP28827 1452 aa10.63□□□□□ -0.71
LINC00547-201ENST00000612438 U2AF2P26368 475 aaKnown RBP eCLIP10.63□□□□□ -0.71
LINC00547-201ENST00000612438 KIAA2012Q0VF49 1180 aa10.63□□□□□ -0.71
LINC00547-201ENST00000612438 TSC1Q92574 1164 aa10.63□□□□□ -0.71
LINC00547-201ENST00000612438 THUMPD2Q9BTF0 503 aaKnown RBP10.63□□□□□ -0.71
LINC00547-201ENST00000612438 SIGLEC1Q9BZZ2 1709 aa10.63□□□□□ -0.71
LINC00547-201ENST00000612438 POLKQ9UBT6 870 aa10.63□□□□□ -0.71
LINC00547-201ENST00000612438 SLFN14P0C7P3 912 aa10.62□□□□□ -0.71
LINC00547-201ENST00000612438 PRR29P0C7W0 189 aa10.62□□□□□ -0.71
LINC00547-201ENST00000612438 PLEKHM2Q8IWE5 1019 aa10.62□□□□□ -0.71
LINC00547-201ENST00000612438 CEP120Q8N960 986 aa10.62□□□□□ -0.71
LINC00547-201ENST00000612438 CFAP44Q96MT7 982 aa10.62□□□□□ -0.71
LINC00547-201ENST00000612438 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.62□□□□□ -0.71
LINC00547-201ENST00000612438 MYCBPQ99417 103 aaPredicted RBP10.62□□□□□ -0.71
LINC00547-201ENST00000612438 ZNF445P59923 1031 aa10.61□□□□□ -0.71
LINC00547-201ENST00000612438 NUCB2P80303 420 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms