RNA–Protein interactions for RNA: ENST00000612355.1

PPARGC1A-216, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 5 BASIC

Gene PPARGC1A, Length 936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-216ENST00000612355 KCNQ4P56696 695 aa14.16□□□□□ -0.14
PPARGC1A-216ENST00000612355 NME9Q86XW9 330 aa14.16□□□□□ -0.14
PPARGC1A-216ENST00000612355 COL23A1Q86Y22 540 aaPredicted RBP14.16□□□□□ -0.14
PPARGC1A-216ENST00000612355 CD2APQ9Y5K6 639 aa14.16□□□□□ -0.14
PPARGC1A-216ENST00000612355 PRIM1P49642 420 aaKnown RBP14.15□□□□□ -0.14
PPARGC1A-216ENST00000612355 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.15□□□□□ -0.146e-11■■■□□ 18.1
PPARGC1A-216ENST00000612355 DDX54Q8TDD1 881 aaKnown RBP14.15□□□□□ -0.14
PPARGC1A-216ENST00000612355 CCNL1Q9UK58 526 aaPredicted RBP14.15□□□□□ -0.14
PPARGC1A-216ENST00000612355 TOGARAM1Q9Y4F4 1720 aa14.15□□□□□ -0.14
PPARGC1A-216ENST00000612355 ROCK2O75116 1388 aaKnown RBP14.14□□□□□ -0.15
PPARGC1A-216ENST00000612355 MEGF6O75095 1541 aa14.14□□□□□ -0.15
PPARGC1A-216ENST00000612355 UBR3Q6ZT12 1888 aa14.14□□□□□ -0.15
PPARGC1A-216ENST00000612355 IP6K1Q92551 441 aa14.13□□□□□ -0.15
PPARGC1A-216ENST00000612355 PCNTO95613 3336 aa14.12□□□□□ -0.15
PPARGC1A-216ENST00000612355 USP47Q96K76 1375 aa14.12□□□□□ -0.15
PPARGC1A-216ENST00000612355 L3MBTL2Q969R5 705 aa14.12□□□□□ -0.15
PPARGC1A-216ENST00000612355 SYTL4Q96C24 671 aaPredicted RBP14.12□□□□□ -0.15
PPARGC1A-216ENST00000612355 C4BP0C0L5 1744 aa14.11□□□□□ -0.15
PPARGC1A-216ENST00000612355 MSL1Q68DK7 614 aa14.11□□□□□ -0.15
PPARGC1A-216ENST00000612355 A0A1W2PP64 1363 aa14.1□□□□□ -0.15
PPARGC1A-216ENST00000612355 ITGB4P16144 1822 aa14.09□□□□□ -0.15
PPARGC1A-216ENST00000612355 KIF13BQ9NQT8 1826 aa14.09□□□□□ -0.15
PPARGC1A-216ENST00000612355 KIF3CO14782 793 aa14.09□□□□□ -0.15
PPARGC1A-216ENST00000612355 MSH5O43196 834 aa14.09□□□□□ -0.15
PPARGC1A-216ENST00000612355 HMGB2P26583 209 aaKnown RBP14.09□□□□□ -0.15
PPARGC1A-216ENST00000612355 FLAD1Q8NFF5 587 aa14.09□□□□□ -0.15
PPARGC1A-216ENST00000612355 ZCRB1Q8TBF4 217 aaKnown RBP14.09□□□□□ -0.15
PPARGC1A-216ENST00000612355 KIAA1551Q9HCM1 1747 aa14.08□□□□□ -0.16
PPARGC1A-216ENST00000612355 HDGFL2Q7Z4V5 671 aaPredicted RBP14.08□□□□□ -0.16
PPARGC1A-216ENST00000612355 CGNL1Q0VF96 1302 aa14.08□□□□□ -0.16
PPARGC1A-216ENST00000612355 MAP2P11137 1827 aaKnown RBP14.08□□□□□ -0.16
PPARGC1A-216ENST00000612355 RTL1A6NKG5 1358 aa14.08□□□□□ -0.16
PPARGC1A-216ENST00000612355 ZNF526Q8TF50 670 aaPredicted RBP14.07□□□□□ -0.16
PPARGC1A-216ENST00000612355 MAP3K19Q56UN5 1328 aa14.07□□□□□ -0.16
PPARGC1A-216ENST00000612355 IGSF1Q8N6C5 1336 aa14.07□□□□□ -0.16
PPARGC1A-216ENST00000612355 WDR90Q96KV7 1748 aa14.07□□□□□ -0.16
PPARGC1A-216ENST00000612355 HOXC9P31274 260 aa14.06□□□□□ -0.16
PPARGC1A-216ENST00000612355 APLP1P51693 650 aa14.06□□□□□ -0.16
PPARGC1A-216ENST00000612355 LTV1Q96GA3 475 aaPredicted RBP14.06□□□□□ -0.16
PPARGC1A-216ENST00000612355 PALLDQ8WX93 1383 aa14.06□□□□□ -0.16
PPARGC1A-216ENST00000612355 NSD3Q9BZ95 1437 aa14.06□□□□□ -0.16
PPARGC1A-216ENST00000612355 PKD1L3Q7Z443 1732 aa14.05□□□□□ -0.16
PPARGC1A-216ENST00000612355 SLC12A5Q9H2X9 1139 aa14.05□□□□□ -0.16
PPARGC1A-216ENST00000612355 TERF2IPQ9NYB0 399 aa14.05□□□□□ -0.16
PPARGC1A-216ENST00000612355 DNAJC5GQ8N7S2 189 aa14.04□□□□□ -0.16
PPARGC1A-216ENST00000612355 PUS7Q96PZ0 661 aaKnown RBP14.04□□□□□ -0.16
PPARGC1A-216ENST00000612355 BRCA1P38398 1863 aaKnown RBP14.04□□□□□ -0.16
PPARGC1A-216ENST00000612355 AMIGO3Q86WK7 504 aa14.03□□□□□ -0.16
PPARGC1A-216ENST00000612355 TMC1Q8TDI8 760 aa14.03□□□□□ -0.16
PPARGC1A-216ENST00000612355 PCDH11XQ9BZA7 1347 aa14.01□□□□□ -0.17
PPARGC1A-216ENST00000612355 PCDH11YQ9BZA8 1340 aa14.01□□□□□ -0.17
PPARGC1A-216ENST00000612355 NBPF6Q5VWK0 638 aa14.01□□□□□ -0.17
PPARGC1A-216ENST00000612355 NBPF4Q96M43 638 aa14.01□□□□□ -0.17
PPARGC1A-216ENST00000612355 N4BP2Q86UW6 1770 aaPredicted RBP14.01□□□□□ -0.17
PPARGC1A-216ENST00000612355 PXDNLA1KZ92 1463 aa14□□□□□ -0.17
PPARGC1A-216ENST00000612355 TOMM70O94826 608 aa14□□□□□ -0.17
PPARGC1A-216ENST00000612355 AMPHP49418 695 aa14□□□□□ -0.17
PPARGC1A-216ENST00000612355 COG3Q96JB2 828 aa14□□□□□ -0.17
PPARGC1A-216ENST00000612355 SMG6Q86US8 1419 aaKnown RBP13.99□□□□□ -0.17
PPARGC1A-216ENST00000612355 ARFGEF1Q9Y6D6 1849 aa13.99□□□□□ -0.17
PPARGC1A-216ENST00000612355 SSFA2P28290 1259 aa13.99□□□□□ -0.17
PPARGC1A-216ENST00000612355 AK7Q96M32 723 aa13.99□□□□□ -0.17
PPARGC1A-216ENST00000612355 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.98□□□□□ -0.17
PPARGC1A-216ENST00000612355 RAPGEF4Q8WZA2 1011 aa13.98□□□□□ -0.17
PPARGC1A-216ENST00000612355 SMARCC1Q92922 1105 aaPredicted RBP13.98□□□□□ -0.17
PPARGC1A-216ENST00000612355 NCAPD2Q15021 1401 aa13.98□□□□□ -0.17
PPARGC1A-216ENST00000612355 FBLN1P23142 703 aa13.97□□□□□ -0.17
PPARGC1A-216ENST00000612355 WWC3Q9ULE0 1092 aa13.97□□□□□ -0.17
PPARGC1A-216ENST00000612355 C10orf71Q711Q0 1435 aa13.97□□□□□ -0.17
PPARGC1A-216ENST00000612355 KIF20BQ96Q89 1820 aa13.97□□□□□ -0.17
PPARGC1A-216ENST00000612355 KIF24Q5T7B8 1368 aa13.96□□□□□ -0.17
PPARGC1A-216ENST00000612355 ZNF831Q5JPB2 1677 aa13.96□□□□□ -0.17
PPARGC1A-216ENST00000612355 CYP27B1O15528 508 aa13.96□□□□□ -0.17
PPARGC1A-216ENST00000612355 TATP17735 454 aaPredicted RBP13.96□□□□□ -0.17
PPARGC1A-216ENST00000612355 MPRIPQ6WCQ1 1025 aa13.96□□□□□ -0.17
PPARGC1A-216ENST00000612355 USHBP1Q8N6Y0 703 aa13.96□□□□□ -0.17
PPARGC1A-216ENST00000612355 JMYQ8N9B5 988 aa13.96□□□□□ -0.17
PPARGC1A-216ENST00000612355 SIN3AQ96ST3 1273 aa13.96□□□□□ -0.17
PPARGC1A-216ENST00000612355 CARD11Q9BXL7 1154 aa13.96□□□□□ -0.17
PPARGC1A-216ENST00000612355 INSRP06213 1382 aa13.96□□□□□ -0.18
PPARGC1A-216ENST00000612355 PHF14O94880 888 aa13.95□□□□□ -0.18
PPARGC1A-216ENST00000612355 RBM46Q8TBY0 533 aaKnown RBP13.95□□□□□ -0.18
PPARGC1A-216ENST00000612355 ANKRD26Q9UPS8 1709 aa13.95□□□□□ -0.18
PPARGC1A-216ENST00000612355 C4AP0C0L4 1744 aa13.94□□□□□ -0.18
PPARGC1A-216ENST00000612355 RRS1Q15050 365 aaKnown RBP13.94□□□□□ -0.18
PPARGC1A-216ENST00000612355 LINC00116Q8NCU8 138 aa13.94□□□□□ -0.18
PPARGC1A-216ENST00000612355 TNRC6CQ9HCJ0 1690 aaKnown RBP13.94□□□□□ -0.18
PPARGC1A-216ENST00000612355 FLT4P35916 1363 aa13.94□□□□□ -0.18
PPARGC1A-216ENST00000612355 COL5A3P25940 1745 aaPredicted RBP13.93□□□□□ -0.18
PPARGC1A-216ENST00000612355 LOC102724428A0A0B4J2F2 783 aa13.93□□□□□ -0.18
PPARGC1A-216ENST00000612355 SIK1P57059 783 aa13.93□□□□□ -0.18
PPARGC1A-216ENST00000612355 TGFB2P61812 414 aa13.93□□□□□ -0.18
PPARGC1A-216ENST00000612355 NKX1-1Q15270 411 aaPredicted RBP13.93□□□□□ -0.18
PPARGC1A-216ENST00000612355 SMIM5Q71RC9 77 aa13.93□□□□□ -0.18
PPARGC1A-216ENST00000612355 PIGBQ92521 554 aa13.93□□□□□ -0.18
PPARGC1A-216ENST00000612355 KLRG1Q96E93 195 aa13.93□□□□□ -0.18
PPARGC1A-216ENST00000612355 NMRK2Q9NPI5 230 aa13.93□□□□□ -0.18
PPARGC1A-216ENST00000612355 PLEKHG2Q9H7P9 1386 aa13.93□□□□□ -0.18
PPARGC1A-216ENST00000612355 MMP10P09238 476 aa13.92□□□□□ -0.18
PPARGC1A-216ENST00000612355 COL13A1Q5TAT6 717 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms