RNA–Protein interactions for RNA: ENST00000612229.4

PTPRT-209, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

TSL 5 BASIC

Gene PTPRT, Length 11,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-209ENST00000612229 TSPYL4Q9UJ04 414 aa8.14□□□□□ -1.11
PTPRT-209ENST00000612229 BRPF1P55201 1214 aaPredicted RBP8.14□□□□□ -1.11
PTPRT-209ENST00000612229 SKIDA1Q1XH10 827 aa8.14□□□□□ -1.11
PTPRT-209ENST00000612229 TBC1D2BQ9UPU7 963 aa8.14□□□□□ -1.11
PTPRT-209ENST00000612229 FGFR1OPO95684 399 aaKnown RBP8.14□□□□□ -1.11
PTPRT-209ENST00000612229 TRIM22Q8IYM9 498 aa8.14□□□□□ -1.11
PTPRT-209ENST00000612229 DNAJC21Q5F1R6 531 aaKnown RBP8.14□□□□□ -1.11
PTPRT-209ENST00000612229 DNAJC2Q99543 621 aaKnown RBP8.14□□□□□ -1.11
PTPRT-209ENST00000612229 UPF3BQ9BZI7 483 aaKnown RBP8.14□□□□□ -1.11
PTPRT-209ENST00000612229 VIMP08670 466 aaKnown RBP8.13□□□□□ -1.11
PTPRT-209ENST00000612229 SFPQP23246 707 aaKnown RBP eCLIP8.13□□□□□ -1.11
PTPRT-209ENST00000612229 SPATA32Q96LK8 384 aa8.13□□□□□ -1.11
PTPRT-209ENST00000612229 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.13□□□□□ -1.11
PTPRT-209ENST00000612229 GNAI2P04899 355 aa8.13□□□□□ -1.11
PTPRT-209ENST00000612229 FAM193AP78312 1265 aa8.13□□□□□ -1.11
PTPRT-209ENST00000612229 CCDC57Q2TAC2 916 aa8.13□□□□□ -1.11
PTPRT-209ENST00000612229 PRIMPOLQ96LW4 560 aa8.13□□□□□ -1.11
PTPRT-209ENST00000612229 BMP2KQ9NSY1 1161 aaPredicted RBP8.13□□□□□ -1.11
PTPRT-209ENST00000612229 LRRFIP2Q9Y608 721 aaKnown RBP8.13□□□□□ -1.11
PTPRT-209ENST00000612229 SSX2IPQ9Y2D8 614 aa8.13□□□□□ -1.11
PTPRT-209ENST00000612229 KIF5CO60282 957 aa8.13□□□□□ -1.11
PTPRT-209ENST00000612229 CTR9Q6PD62 1173 aa8.13□□□□□ -1.11
PTPRT-209ENST00000612229 ZNF287Q9HBT7 754 aa8.13□□□□□ -1.11
PTPRT-209ENST00000612229 RAD21O60216 631 aa8.13□□□□□ -1.11
PTPRT-209ENST00000612229 EHBP1L1Q8N3D4 1523 aa8.13□□□□□ -1.11
PTPRT-209ENST00000612229 CAVIN2O95810 425 aa8.13□□□□□ -1.11
PTPRT-209ENST00000612229 EIF2S2P20042 333 aaKnown RBP8.13□□□□□ -1.11
PTPRT-209ENST00000612229 MLECQ14165 292 aa8.13□□□□□ -1.11
PTPRT-209ENST00000612229 ARHGAP29Q52LW3 1261 aa8.13□□□□□ -1.11
PTPRT-209ENST00000612229 CCDC30Q5VVM6 783 aa8.13□□□□□ -1.11
PTPRT-209ENST00000612229 PIBF1Q8WXW3 757 aa8.13□□□□□ -1.11
PTPRT-209ENST00000612229 CEP131Q9UPN4 1083 aa8.13□□□□□ -1.11
PTPRT-209ENST00000612229 PDZRN3Q9UPQ7 1066 aa8.13□□□□□ -1.11
PTPRT-209ENST00000612229 WDR97A6NE52 1622 aa8.13□□□□□ -1.11
PTPRT-209ENST00000612229 SF3B2Q13435 895 aaKnown RBP8.13□□□□□ -1.11
PTPRT-209ENST00000612229 TTC14Q96N46 770 aa8.13□□□□□ -1.11
PTPRT-209ENST00000612229 NSRP1Q9H0G5 558 aaKnown RBP8.13□□□□□ -1.11
PTPRT-209ENST00000612229 PAXBP1Q9Y5B6 917 aa8.12□□□□□ -1.11
PTPRT-209ENST00000612229 CCT4P50991 539 aaKnown RBP8.12□□□□□ -1.11
PTPRT-209ENST00000612229 KRT32Q14532 448 aa8.12□□□□□ -1.11
PTPRT-209ENST00000612229 CEP135Q66GS9 1140 aa8.12□□□□□ -1.11
PTPRT-209ENST00000612229 CEP112Q8N8E3 955 aa8.12□□□□□ -1.11
PTPRT-209ENST00000612229 WASF1Q92558 559 aa8.12□□□□□ -1.11
PTPRT-209ENST00000612229 PPP6R1Q9UPN7 881 aa8.12□□□□□ -1.11
PTPRT-209ENST00000612229 HNRNPMP52272 730 aaKnown RBP eCLIP8.12□□□□□ -1.11
PTPRT-209ENST00000612229 WASHC4Q2M389 1173 aa8.12□□□□□ -1.11
PTPRT-209ENST00000612229 CTAGE5O15320 804 aa8.12□□□□□ -1.11
PTPRT-209ENST00000612229 DMRT2Q9Y5R5 561 aa8.12□□□□□ -1.11
PTPRT-209ENST00000612229 TAF4BQ92750 862 aa8.12□□□□□ -1.11
PTPRT-209ENST00000612229 EFCAB5A4FU69 1503 aa8.12□□□□□ -1.11
PTPRT-209ENST00000612229 GSDMDP57764 484 aa8.12□□□□□ -1.11
PTPRT-209ENST00000612229 LARP1BQ659C4 914 aaKnown RBP8.12□□□□□ -1.11
PTPRT-209ENST00000612229 SEPT10Q9P0V9 454 aa8.12□□□□□ -1.11
PTPRT-209ENST00000612229 SOGA3Q5TF21 947 aa8.12□□□□□ -1.11
PTPRT-209ENST00000612229 PPP4R3AQ6IN85 833 aa8.12□□□□□ -1.11
PTPRT-209ENST00000612229 RAB3IL1Q8TBN0 382 aa8.12□□□□□ -1.11
PTPRT-209ENST00000612229 SMC6Q96SB8 1091 aa8.12□□□□□ -1.11
PTPRT-209ENST00000612229 EIF3DO15371 548 aaKnown RBP eCLIP8.11□□□□□ -1.11
PTPRT-209ENST00000612229 STMN1P16949 149 aa8.11□□□□□ -1.11
PTPRT-209ENST00000612229 CPSF2Q9P2I0 782 aaKnown RBP8.11□□□□□ -1.11
PTPRT-209ENST00000612229 WDR63Q8IWG1 891 aa8.11□□□□□ -1.11
PTPRT-209ENST00000612229 CCDC110Q8TBZ0 833 aa8.11□□□□□ -1.11
PTPRT-209ENST00000612229 CCDC14Q49A88 953 aa8.11□□□□□ -1.11
PTPRT-209ENST00000612229 SYCE3A1L190 88 aa8.11□□□□□ -1.11
PTPRT-209ENST00000612229 NBPF1Q3BBV0 1214 aa8.11□□□□□ -1.11
PTPRT-209ENST00000612229 GNL3LQ9NVN8 582 aaKnown RBP8.11□□□□□ -1.11
PTPRT-209ENST00000612229 USO1O60763 962 aaKnown RBP8.11□□□□□ -1.11
PTPRT-209ENST00000612229 NAP1L3Q99457 506 aaPredicted RBP8.11□□□□□ -1.11
PTPRT-209ENST00000612229 PYM1Q9BRP8 204 aaKnown RBP8.11□□□□□ -1.11
PTPRT-209ENST00000612229 NOL7Q9UMY1 257 aaKnown RBP8.11□□□□□ -1.11
PTPRT-209ENST00000612229 OPA1O60313 960 aa8.1□□□□□ -1.11
PTPRT-209ENST00000612229 AIMP1Q12904 312 aaKnown RBP8.1□□□□□ -1.11
PTPRT-209ENST00000612229 ALS2CR12Q96Q35 445 aa8.1□□□□□ -1.11
PTPRT-209ENST00000612229 IFI16Q16666 785 aaKnown RBP8.1□□□□□ -1.11
PTPRT-209ENST00000612229 CCDC172P0C7W6 258 aa8.1□□□□□ -1.11
PTPRT-209ENST00000612229 CBX1P83916 185 aa8.1□□□□□ -1.11
PTPRT-209ENST00000612229 SH2D4BQ5SQS7 431 aa8.1□□□□□ -1.11
PTPRT-209ENST00000612229 RIC3Q7Z5B4 369 aa8.1□□□□□ -1.11
PTPRT-209ENST00000612229 FAM177A1Q8N128 213 aaPredicted RBP8.1□□□□□ -1.11
PTPRT-209ENST00000612229 SPA17Q15506 151 aa8.1□□□□□ -1.11
PTPRT-209ENST00000612229 PAIP2Q9BPZ3 127 aaKnown RBP8.1□□□□□ -1.11
PTPRT-209ENST00000612229 CHD1LQ86WJ1 897 aa8.1□□□□□ -1.11
PTPRT-209ENST00000612229 ZFYP08048 801 aaPredicted RBP8.1□□□□□ -1.11
PTPRT-209ENST00000612229 TNIP1Q15025 636 aa8.1□□□□□ -1.11
PTPRT-209ENST00000612229 IKBKGQ9Y6K9 419 aa8.1□□□□□ -1.11
PTPRT-209ENST00000612229 PPP4R3BQ5MIZ7 849 aa8.1□□□□□ -1.11
PTPRT-209ENST00000612229 NCAPGQ9BPX3 1015 aa8.1□□□□□ -1.11
PTPRT-209ENST00000612229 ZSCAN25Q6NSZ9 544 aa8.09□□□□□ -1.11
PTPRT-209ENST00000612229 ZNF428Q96B54 188 aa8.09□□□□□ -1.11
PTPRT-209ENST00000612229 DHX29Q7Z478 1369 aaKnown RBP8.09□□□□□ -1.11
PTPRT-209ENST00000612229 POGZQ7Z3K3 1410 aa8.09□□□□□ -1.11
PTPRT-209ENST00000612229 A6NNZ2 444 aa8.09□□□□□ -1.11
PTPRT-209ENST00000612229 MVPQ14764 893 aaKnown RBP8.09□□□□□ -1.11
PTPRT-209ENST00000612229 TUBB8Q3ZCM7 444 aa8.09□□□□□ -1.11
PTPRT-209ENST00000612229 FMNL3Q8IVF7 1028 aa8.09□□□□□ -1.11
PTPRT-209ENST00000612229 ANO10Q9NW15 660 aa8.09□□□□□ -1.11
PTPRT-209ENST00000612229 CEBPZQ03701 1054 aaKnown RBP8.09□□□□□ -1.11
PTPRT-209ENST00000612229 SCAND2PQ9GZW5 306 aaPredicted RBP8.09□□□□□ -1.11
PTPRT-209ENST00000612229 MAP4K4O95819 1239 aaPredicted RBP8.09□□□□□ -1.11
PTPRT-209ENST00000612229 HSPA4P34932 840 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms