RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 LMO7Q8WWI1 1683 aa15.93■□□□□ 0.14
CBWD1-220ENST00000612045 MBIPQ9NS73 344 aa15.92■□□□□ 0.14
CBWD1-220ENST00000612045 PPP4R2Q9NY27 417 aa15.92■□□□□ 0.14
CBWD1-220ENST00000612045 GNAT3A8MTJ3 354 aa15.91■□□□□ 0.14
CBWD1-220ENST00000612045 TOM1O60784 492 aa15.91■□□□□ 0.14
CBWD1-220ENST00000612045 CRB1P82279 1406 aa15.91■□□□□ 0.14
CBWD1-220ENST00000612045 NLRP2Q9NX02 1062 aa15.91■□□□□ 0.14
CBWD1-220ENST00000612045 MAP3K5Q99683 1374 aa15.9■□□□□ 0.14
CBWD1-220ENST00000612045 CSB-PGBD3P0DP91 1061 aa15.9■□□□□ 0.14
CBWD1-220ENST00000612045 FAM208AQ9UK61 1670 aaKnown RBP15.9■□□□□ 0.14
CBWD1-220ENST00000612045 AMOTQ4VCS5 1084 aa15.89■□□□□ 0.13
CBWD1-220ENST00000612045 PLEKHO1Q53GL0 409 aaPredicted RBP15.89■□□□□ 0.13
CBWD1-220ENST00000612045 CHL1O00533 1208 aa15.89■□□□□ 0.13
CBWD1-220ENST00000612045 C20orf194Q5TEA3 1177 aa15.89■□□□□ 0.13
CBWD1-220ENST00000612045 EXOC6Q8TAG9 804 aa15.88■□□□□ 0.13
CBWD1-220ENST00000612045 PIP4K2BP78356 416 aa15.87■□□□□ 0.13
CBWD1-220ENST00000612045 LRRC37A3O60309 1634 aa15.87■□□□□ 0.13
CBWD1-220ENST00000612045 COL22A1Q8NFW1 1626 aaPredicted RBP15.87■□□□□ 0.13
CBWD1-220ENST00000612045 PHLPP1O60346 1717 aa15.87■□□□□ 0.13
CBWD1-220ENST00000612045 IL17REQ8NFR9 667 aa15.87■□□□□ 0.13
CBWD1-220ENST00000612045 BCL2L13Q9BXK5 485 aa15.87■□□□□ 0.13
CBWD1-220ENST00000612045 COL5A2P05997 1499 aaPredicted RBP15.86■□□□□ 0.13
CBWD1-220ENST00000612045 AKAP4Q5JQC9 854 aa15.86■□□□□ 0.13
CBWD1-220ENST00000612045 ZNF530Q6P9A1 599 aaPredicted RBP15.86■□□□□ 0.13
CBWD1-220ENST00000612045 RAPGEF4Q8WZA2 1011 aa15.86■□□□□ 0.13
CBWD1-220ENST00000612045 ZNF428Q96B54 188 aa15.86■□□□□ 0.13
CBWD1-220ENST00000612045 WDR17Q8IZU2 1322 aa15.86■□□□□ 0.13
CBWD1-220ENST00000612045 COL16A1Q07092 1604 aaPredicted RBP15.86■□□□□ 0.13
CBWD1-220ENST00000612045 UBAP1LF5GYI3 381 aa15.85■□□□□ 0.13
CBWD1-220ENST00000612045 CANXP27824 592 aaKnown RBP15.85■□□□□ 0.13
CBWD1-220ENST00000612045 SSH1Q8WYL5 1049 aa15.85■□□□□ 0.13
CBWD1-220ENST00000612045 CRBNQ96SW2 442 aa15.85■□□□□ 0.13
CBWD1-220ENST00000612045 VAMP4O75379 141 aa15.84■□□□□ 0.13
CBWD1-220ENST00000612045 CACNB1Q02641 598 aaPredicted RBP15.84■□□□□ 0.13
CBWD1-220ENST00000612045 TSPYL6Q8N831 410 aa15.84■□□□□ 0.13
CBWD1-220ENST00000612045 C8orf58Q8NAV2 365 aa15.84■□□□□ 0.13
CBWD1-220ENST00000612045 FRAT1Q92837 279 aaPredicted RBP15.84■□□□□ 0.13
CBWD1-220ENST00000612045 SMC4Q9NTJ3 1288 aa15.84■□□□□ 0.13
CBWD1-220ENST00000612045 CEMIPQ8WUJ3 1361 aa15.84■□□□□ 0.13
CBWD1-220ENST00000612045 TATP17735 454 aaPredicted RBP15.84■□□□□ 0.13
CBWD1-220ENST00000612045 ALDH1L2Q3SY69 923 aa15.84■□□□□ 0.13
CBWD1-220ENST00000612045 MEGF6O75095 1541 aa15.84■□□□□ 0.13
CBWD1-220ENST00000612045 PLEKHG2Q9H7P9 1386 aa15.83■□□□□ 0.13
CBWD1-220ENST00000612045 PDE3AQ14432 1141 aa15.83■□□□□ 0.12
CBWD1-220ENST00000612045 TWISTNBQ3B726 338 aaPredicted RBP15.83■□□□□ 0.12
CBWD1-220ENST00000612045 C1orf141Q5JVX7 400 aa15.83■□□□□ 0.12
CBWD1-220ENST00000612045 B4GALNT3Q6L9W6 998 aa15.83■□□□□ 0.12
CBWD1-220ENST00000612045 MIS18AQ9NYP9 233 aa15.83■□□□□ 0.12
CBWD1-220ENST00000612045 TSPYL4Q9UJ04 414 aa15.83■□□□□ 0.12
CBWD1-220ENST00000612045 ELL2O00472 640 aaPredicted RBP15.82■□□□□ 0.12
CBWD1-220ENST00000612045 TOM1L2Q6ZVM7 507 aa15.82■□□□□ 0.12
CBWD1-220ENST00000612045 TAF7Q15545 349 aaPredicted RBP15.82■□□□□ 0.12
CBWD1-220ENST00000612045 LGR6Q9HBX8 967 aa15.82■□□□□ 0.12
CBWD1-220ENST00000612045 BABAM1Q9NWV8 329 aa15.82■□□□□ 0.12
CBWD1-220ENST00000612045 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.82■□□□□ 0.121e-6■■■■□ 25.6
CBWD1-220ENST00000612045 EVA1CP58658 441 aa15.81■□□□□ 0.12
CBWD1-220ENST00000612045 MPRIPQ6WCQ1 1025 aa15.81■□□□□ 0.12
CBWD1-220ENST00000612045 STRN4Q9NRL3 753 aa15.81■□□□□ 0.12
CBWD1-220ENST00000612045 CARD10Q9BWT7 1032 aa15.8■□□□□ 0.12
CBWD1-220ENST00000612045 SPG7Q9UQ90 795 aa15.8■□□□□ 0.12
CBWD1-220ENST00000612045 COL14A1Q05707 1796 aaKnown RBP15.8■□□□□ 0.12
CBWD1-220ENST00000612045 BRPF1P55201 1214 aaPredicted RBP15.8■□□□□ 0.12
CBWD1-220ENST00000612045 KRT24Q2M2I5 525 aa15.8■□□□□ 0.12
CBWD1-220ENST00000612045 ZKSCAN2Q63HK3 967 aa15.8■□□□□ 0.12
CBWD1-220ENST00000612045 LARP1Q6PKG0 1096 aaKnown RBP15.8■□□□□ 0.12
CBWD1-220ENST00000612045 CCDC136Q96JN2 1154 aa15.8■□□□□ 0.12
CBWD1-220ENST00000612045 BTG4Q9NY30 223 aa15.8■□□□□ 0.12
CBWD1-220ENST00000612045 OVOS2A0A0G2JMS6 1433 aa15.79■□□□□ 0.12
CBWD1-220ENST00000612045 RNMTO43148 476 aaKnown RBP15.79■□□□□ 0.12
CBWD1-220ENST00000612045 PANK1Q8TE04 598 aa15.79■□□□□ 0.12
CBWD1-220ENST00000612045 KIF16BQ96L93 1317 aa15.78■□□□□ 0.12
CBWD1-220ENST00000612045 CERKQ8TCT0 537 aa15.78■□□□□ 0.12
CBWD1-220ENST00000612045 NOB1Q9ULX3 412 aaKnown RBP15.78■□□□□ 0.12
CBWD1-220ENST00000612045 PKD1L3Q7Z443 1732 aa15.78■□□□□ 0.12
CBWD1-220ENST00000612045 TEFQ10587 303 aa15.78■□□□□ 0.12
CBWD1-220ENST00000612045 MRPL50Q8N5N7 158 aaKnown RBP15.78■□□□□ 0.12
CBWD1-220ENST00000612045 TNNQ9UQP3 1299 aa15.78■□□□□ 0.12
CBWD1-220ENST00000612045 PHKG2P15735 406 aa15.77■□□□□ 0.11
CBWD1-220ENST00000612045 IFNL2Q8IZJ0 200 aa15.77■□□□□ 0.11
CBWD1-220ENST00000612045 VIRMAQ69YN4 1812 aaKnown RBP15.77■□□□□ 0.11
CBWD1-220ENST00000612045 ADAMTS7Q9UKP4 1686 aa15.76■□□□□ 0.11
CBWD1-220ENST00000612045 IPO8O15397 1037 aaKnown RBP15.76■□□□□ 0.11
CBWD1-220ENST00000612045 MS4A1P11836 297 aa15.76■□□□□ 0.11
CBWD1-220ENST00000612045 RLBP1P12271 317 aa15.76■□□□□ 0.11
CBWD1-220ENST00000612045 ATF7IPQ6VMQ6 1270 aa15.76■□□□□ 0.11
CBWD1-220ENST00000612045 PARP4Q9UKK3 1724 aaKnown RBP15.76■□□□□ 0.11
CBWD1-220ENST00000612045 TRIM27P14373 513 aa15.75■□□□□ 0.11
CBWD1-220ENST00000612045 CLUAP1Q96AJ1 413 aa15.75■□□□□ 0.11
CBWD1-220ENST00000612045 COG6Q9Y2V7 657 aa15.75■□□□□ 0.11
CBWD1-220ENST00000612045 TCERG1O14776 1098 aaKnown RBP15.75■□□□□ 0.11
CBWD1-220ENST00000612045 CYP27B1O15528 508 aa15.75■□□□□ 0.11
CBWD1-220ENST00000612045 ADAMTS2O95450 1211 aa15.75■□□□□ 0.11
CBWD1-220ENST00000612045 IL2RBP14784 551 aa15.75■□□□□ 0.11
CBWD1-220ENST00000612045 FTSJ3Q8IY81 847 aaKnown RBP15.75■□□□□ 0.11
CBWD1-220ENST00000612045 DZIP1LQ8IYY4 767 aaKnown RBP15.75■□□□□ 0.11
CBWD1-220ENST00000612045 BTBD11A6QL63 1104 aa15.74■□□□□ 0.11
CBWD1-220ENST00000612045 KDM6AO15550 1401 aaPredicted RBP15.73■□□□□ 0.11
CBWD1-220ENST00000612045 ZCRB1Q8TBF4 217 aaKnown RBP15.73■□□□□ 0.11
CBWD1-220ENST00000612045 KDM3BQ7LBC6 1761 aa15.73■□□□□ 0.11
CBWD1-220ENST00000612045 NUTM2BA6NNL0 878 aaPredicted RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms