RNA–Protein interactions for RNA: ENST00000612011.1

PVT1-221, Transcript of Pvt1 oncogene, humanhuman

Gene PVT1, Length 169 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-221ENST00000612011 PLEKHG2Q9H7P9 1386 aa13.37□□□□□ -0.27
PVT1-221ENST00000612011 DOT1LQ8TEK3 1739 aa13.37□□□□□ -0.27
PVT1-221ENST00000612011 TOGARAM1Q9Y4F4 1720 aa13.37□□□□□ -0.27
PVT1-221ENST00000612011 TATP17735 454 aaPredicted RBP13.37□□□□□ -0.27
PVT1-221ENST00000612011 TMPOP42166 694 aaKnown RBP13.37□□□□□ -0.27
PVT1-221ENST00000612011 NEUROD2Q15784 382 aa13.37□□□□□ -0.27
PVT1-221ENST00000612011 NFE2L2Q16236 605 aa13.37□□□□□ -0.27
PVT1-221ENST00000612011 UNC5CLQ8IV45 518 aa13.37□□□□□ -0.27
PVT1-221ENST00000612011 FNBP4Q8N3X1 1017 aaPredicted RBP13.37□□□□□ -0.27
PVT1-221ENST00000612011 USP35Q9P2H5 1018 aa13.37□□□□□ -0.27
PVT1-221ENST00000612011 USP21Q9UK80 565 aa13.37□□□□□ -0.27
PVT1-221ENST00000612011 NGEFQ8N5V2 710 aa13.36□□□□□ -0.27
PVT1-221ENST00000612011 CCDC9Q9Y3X0 531 aaKnown RBP13.36□□□□□ -0.27
PVT1-221ENST00000612011 DISP2A7MBM2 1401 aa13.36□□□□□ -0.27
PVT1-221ENST00000612011 SPATA31A1Q5TZJ5 1347 aa13.36□□□□□ -0.27
PVT1-221ENST00000612011 KDM3BQ7LBC6 1761 aa13.35□□□□□ -0.27
PVT1-221ENST00000612011 MTHFSDQ2M296 383 aaKnown RBP13.35□□□□□ -0.27
PVT1-221ENST00000612011 GAS2L2Q8NHY3 880 aa13.35□□□□□ -0.27
PVT1-221ENST00000612011 SPATA31A5Q5VU36 1347 aa13.35□□□□□ -0.27
PVT1-221ENST00000612011 SPATA31A7Q8IWB4 1347 aa13.35□□□□□ -0.27
PVT1-221ENST00000612011 SBF2Q86WG5 1849 aa13.34□□□□□ -0.27
PVT1-221ENST00000612011 ATRNO75882 1429 aa13.34□□□□□ -0.27
PVT1-221ENST00000612011 IL2RBP14784 551 aa13.34□□□□□ -0.27
PVT1-221ENST00000612011 RIPK4P57078 832 aa13.34□□□□□ -0.27
PVT1-221ENST00000612011 VPS72Q15906 364 aa13.34□□□□□ -0.27
PVT1-221ENST00000612011 PLEKHO1Q53GL0 409 aaPredicted RBP13.34□□□□□ -0.27
PVT1-221ENST00000612011 MAP3K5Q99683 1374 aa13.33□□□□□ -0.27
PVT1-221ENST00000612011 TNS2Q63HR2 1409 aa13.33□□□□□ -0.28
PVT1-221ENST00000612011 AMOTQ4VCS5 1084 aa13.33□□□□□ -0.28
PVT1-221ENST00000612011 ZNF530Q6P9A1 599 aaPredicted RBP13.33□□□□□ -0.28
PVT1-221ENST00000612011 THRAP3Q9Y2W1 955 aaKnown RBP13.33□□□□□ -0.28
PVT1-221ENST00000612011 LMOD3Q0VAK6 560 aa13.32□□□□□ -0.28
PVT1-221ENST00000612011 CCDC27Q2M243 656 aa13.32□□□□□ -0.28
PVT1-221ENST00000612011 NCBP3Q53F19 620 aaKnown RBP13.32□□□□□ -0.28
PVT1-221ENST00000612011 SPG7Q9UQ90 795 aa13.32□□□□□ -0.28
PVT1-221ENST00000612011 C1orf141Q5JVX7 400 aa13.31□□□□□ -0.28
PVT1-221ENST00000612011 WWC1Q8IX03 1113 aa13.31□□□□□ -0.28
PVT1-221ENST00000612011 TRIM35Q9UPQ4 493 aa13.31□□□□□ -0.28
PVT1-221ENST00000612011 ZNF521Q96K83 1311 aa13.31□□□□□ -0.28
PVT1-221ENST00000612011 GNAT3A8MTJ3 354 aa13.3□□□□□ -0.28
PVT1-221ENST00000612011 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.3□□□□□ -0.28
PVT1-221ENST00000612011 TRPC5Q9UL62 973 aaPredicted RBP13.3□□□□□ -0.28
PVT1-221ENST00000612011 PAPPAQ13219 1627 aa13.3□□□□□ -0.28
PVT1-221ENST00000612011 PCDH11XQ9BZA7 1347 aa13.3□□□□□ -0.28
PVT1-221ENST00000612011 PCDH11YQ9BZA8 1340 aa13.3□□□□□ -0.28
PVT1-221ENST00000612011 AKAP4Q5JQC9 854 aa13.29□□□□□ -0.28
PVT1-221ENST00000612011 BARGINQ6ZT62 677 aa13.29□□□□□ -0.28
PVT1-221ENST00000612011 ZCRB1Q8TBF4 217 aaKnown RBP13.29□□□□□ -0.28
PVT1-221ENST00000612011 RTF1Q92541 710 aaKnown RBP13.29□□□□□ -0.28
PVT1-221ENST00000612011 PHF23Q9BUL5 403 aaPredicted RBP13.29□□□□□ -0.28
PVT1-221ENST00000612011 CDCA7Q9BWT1 371 aaPredicted RBP13.29□□□□□ -0.28
PVT1-221ENST00000612011 MRC1P22897 1456 aa13.29□□□□□ -0.28
PVT1-221ENST00000612011 CACNA1FO60840 1977 aa13.29□□□□□ -0.28
PVT1-221ENST00000612011 UBR2Q8IWV8 1755 aa13.28□□□□□ -0.28
PVT1-221ENST00000612011 GOLGA2Q08379 1002 aa13.28□□□□□ -0.28
PVT1-221ENST00000612011 HTATSF1O43719 755 aaKnown RBP13.27□□□□□ -0.29
PVT1-221ENST00000612011 PHKG2P15735 406 aa13.27□□□□□ -0.29
PVT1-221ENST00000612011 PDE3BQ13370 1112 aa13.27□□□□□ -0.29
PVT1-221ENST00000612011 DCTN1Q14203 1278 aa13.27□□□□□ -0.29
PVT1-221ENST00000612011 FAM98CQ17RN3 349 aaKnown RBP13.27□□□□□ -0.29
PVT1-221ENST00000612011 ZNF772Q68DY9 489 aaPredicted RBP13.27□□□□□ -0.29
PVT1-221ENST00000612011 MCM10Q7L590 875 aa13.27□□□□□ -0.29
PVT1-221ENST00000612011 WDR63Q8IWG1 891 aa13.27□□□□□ -0.29
PVT1-221ENST00000612011 IFNL2Q8IZJ0 200 aa13.27□□□□□ -0.29
PVT1-221ENST00000612011 GJD4Q96KN9 370 aaPredicted RBP13.27□□□□□ -0.29
PVT1-221ENST00000612011 THUMPD2Q9BTF0 503 aaKnown RBP13.27□□□□□ -0.29
PVT1-221ENST00000612011 KDM6AO15550 1401 aaPredicted RBP13.27□□□□□ -0.29
PVT1-221ENST00000612011 A0A0G2JS52 829 aa13.26□□□□□ -0.29
PVT1-221ENST00000612011 LAMB4A4D0S4 1761 aa13.26□□□□□ -0.29
PVT1-221ENST00000612011 CYP27B1O15528 508 aa13.26□□□□□ -0.29
PVT1-221ENST00000612011 CENPBP07199 599 aaPredicted RBP13.26□□□□□ -0.29
PVT1-221ENST00000612011 MYT1Q01538 1121 aa13.26□□□□□ -0.29
PVT1-221ENST00000612011 NHSQ6T4R5 1651 aa13.26□□□□□ -0.29
PVT1-221ENST00000612011 QTRT2Q9H974 415 aaKnown RBP13.26□□□□□ -0.29
PVT1-221ENST00000612011 BTAF1O14981 1849 aa13.25□□□□□ -0.29
PVT1-221ENST00000612011 C5P01031 1676 aa13.25□□□□□ -0.29
PVT1-221ENST00000612011 CEMIPQ8WUJ3 1361 aa13.25□□□□□ -0.29
PVT1-221ENST00000612011 IL16Q14005 1332 aa13.25□□□□□ -0.29
PVT1-221ENST00000612011 EXOC5O00471 708 aa13.25□□□□□ -0.29
PVT1-221ENST00000612011 CALD1Q05682 793 aaKnown RBP13.25□□□□□ -0.29
PVT1-221ENST00000612011 DDB1Q16531 1140 aa13.25□□□□□ -0.29
PVT1-221ENST00000612011 CDCA7LQ96GN5 454 aa13.25□□□□□ -0.29
PVT1-221ENST00000612011 RNMTO43148 476 aaKnown RBP13.24□□□□□ -0.29
PVT1-221ENST00000612011 HSP90AB1P08238 724 aaKnown RBP13.24□□□□□ -0.29
PVT1-221ENST00000612011 MPRIPQ6WCQ1 1025 aa13.24□□□□□ -0.29
PVT1-221ENST00000612011 ILDR1Q86SU0 546 aaPredicted RBP13.24□□□□□ -0.29
PVT1-221ENST00000612011 DDX54Q8TDD1 881 aaKnown RBP13.24□□□□□ -0.29
PVT1-221ENST00000612011 E9PSI1 815 aa13.23□□□□□ -0.29
PVT1-221ENST00000612011 SLFN5Q08AF3 891 aa13.23□□□□□ -0.29
PVT1-221ENST00000612011 IL17REQ8NFR9 667 aa13.23□□□□□ -0.29
PVT1-221ENST00000612011 LAS1LQ9Y4W2 734 aaKnown RBP13.23□□□□□ -0.29
PVT1-221ENST00000612011 GNAI1P63096 354 aa13.22□□□□□ -0.29
PVT1-221ENST00000612011 DCAF5Q96JK2 942 aa13.22□□□□□ -0.29
PVT1-221ENST00000612011 LGR6Q9HBX8 967 aa13.22□□□□□ -0.29
PVT1-221ENST00000612011 SPINK5Q9NQ38 1064 aaPredicted RBP13.22□□□□□ -0.29
PVT1-221ENST00000612011 TEFQ10587 303 aa13.21□□□□□ -0.29
PVT1-221ENST00000612011 MYH16Q9H6N6 1097 aa13.21□□□□□ -0.29
PVT1-221ENST00000612011 IFT57Q9NWB7 429 aa13.21□□□□□ -0.29
PVT1-221ENST00000612011 FANCIQ9NVI1 1328 aa13.2□□□□□ -0.3
PVT1-221ENST00000612011 RBM6P78332 1123 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms