RNA–Protein interactions for RNA: ENST00000611969.4

LINC00116-203, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LINC00116, Length 441 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-203ENST00000611969 SYTL4Q96C24 671 aaPredicted RBP19.7■□□□□ 0.74
LINC00116-203ENST00000611969 ADCY9O60503 1353 aa19.69■□□□□ 0.74
LINC00116-203ENST00000611969 TOGARAM1Q9Y4F4 1720 aa19.68■□□□□ 0.74
LINC00116-203ENST00000611969 MEGF6O75095 1541 aa19.68■□□□□ 0.74
LINC00116-203ENST00000611969 MSL1Q68DK7 614 aa19.68■□□□□ 0.74
LINC00116-203ENST00000611969 GRIN3BO60391 1043 aa19.67■□□□□ 0.74
LINC00116-203ENST00000611969 PRIM1P49642 420 aaKnown RBP19.67■□□□□ 0.74
LINC00116-203ENST00000611969 EDC4Q6P2E9 1401 aaKnown RBP19.67■□□□□ 0.74
LINC00116-203ENST00000611969 COL23A1Q86Y22 540 aaPredicted RBP19.66■□□□□ 0.74
LINC00116-203ENST00000611969 LTV1Q96GA3 475 aaPredicted RBP19.66■□□□□ 0.74
LINC00116-203ENST00000611969 CCNL1Q9UK58 526 aaPredicted RBP19.65■□□□□ 0.74
LINC00116-203ENST00000611969 MSH5O43196 834 aa19.64■□□□□ 0.73
LINC00116-203ENST00000611969 A0A1W2PP64 1363 aa19.64■□□□□ 0.73
LINC00116-203ENST00000611969 ZNF526Q8TF50 670 aaPredicted RBP19.63■□□□□ 0.73
LINC00116-203ENST00000611969 IP6K1Q92551 441 aa19.62■□□□□ 0.73
LINC00116-203ENST00000611969 GPBP1L1Q9HC44 474 aaPredicted RBP19.62■□□□□ 0.73
LINC00116-203ENST00000611969 UBR3Q6ZT12 1888 aa19.62■□□□□ 0.73
LINC00116-203ENST00000611969 HSPA6P17066 643 aa19.61■□□□□ 0.73
LINC00116-203ENST00000611969 C4BP0C0L5 1744 aa19.61■□□□□ 0.73
LINC00116-203ENST00000611969 TMC1Q8TDI8 760 aa19.6■□□□□ 0.73
LINC00116-203ENST00000611969 SLC12A5Q9H2X9 1139 aa19.6■□□□□ 0.73
LINC00116-203ENST00000611969 ITGB4P16144 1822 aa19.6■□□□□ 0.73
LINC00116-203ENST00000611969 USP47Q96K76 1375 aa19.58■□□□□ 0.73
LINC00116-203ENST00000611969 HDGFL2Q7Z4V5 671 aaPredicted RBP19.58■□□□□ 0.72
LINC00116-203ENST00000611969 SIN3AQ96ST3 1273 aa19.58■□□□□ 0.72
LINC00116-203ENST00000611969 MAP3K19Q56UN5 1328 aa19.57■□□□□ 0.72
LINC00116-203ENST00000611969 ZCRB1Q8TBF4 217 aaKnown RBP19.57■□□□□ 0.72
LINC00116-203ENST00000611969 WWC3Q9ULE0 1092 aa19.57■□□□□ 0.72
LINC00116-203ENST00000611969 CICQ96RK0 1608 aaPredicted RBP19.56■□□□□ 0.72
LINC00116-203ENST00000611969 CD2APQ9Y5K6 639 aa19.56■□□□□ 0.72
LINC00116-203ENST00000611969 FBLN1P23142 703 aa19.55■□□□□ 0.72
LINC00116-203ENST00000611969 HOXC9P31274 260 aa19.55■□□□□ 0.72
LINC00116-203ENST00000611969 AMIGO3Q86WK7 504 aa19.55■□□□□ 0.72
LINC00116-203ENST00000611969 KIAA1551Q9HCM1 1747 aa19.55■□□□□ 0.72
LINC00116-203ENST00000611969 PALLDQ8WX93 1383 aa19.53■□□□□ 0.72
LINC00116-203ENST00000611969 MAP2P11137 1827 aaKnown RBP19.53■□□□□ 0.72
LINC00116-203ENST00000611969 IGSF1Q8N6C5 1336 aa19.52■□□□□ 0.72
LINC00116-203ENST00000611969 PKD1L3Q7Z443 1732 aa19.52■□□□□ 0.72
LINC00116-203ENST00000611969 USHBP1Q8N6Y0 703 aa19.52■□□□□ 0.72
LINC00116-203ENST00000611969 TERF2IPQ9NYB0 399 aa19.52■□□□□ 0.72
LINC00116-203ENST00000611969 RTL1A6NKG5 1358 aa19.5■□□□□ 0.71
LINC00116-203ENST00000611969 KIF3CO14782 793 aa19.5■□□□□ 0.71
LINC00116-203ENST00000611969 AMPHP49418 695 aa19.5■□□□□ 0.71
LINC00116-203ENST00000611969 SMIM5Q71RC9 77 aa19.5■□□□□ 0.71
LINC00116-203ENST00000611969 KIF13BQ9NQT8 1826 aa19.5■□□□□ 0.71
LINC00116-203ENST00000611969 N4BP2Q86UW6 1770 aaPredicted RBP19.49■□□□□ 0.71
LINC00116-203ENST00000611969 NEUROD1Q13562 356 aa19.49■□□□□ 0.71
LINC00116-203ENST00000611969 NBPF6Q5VWK0 638 aa19.49■□□□□ 0.71
LINC00116-203ENST00000611969 NBPF4Q96M43 638 aa19.49■□□□□ 0.71
LINC00116-203ENST00000611969 KIF20BQ96Q89 1820 aa19.48■□□□□ 0.71
LINC00116-203ENST00000611969 WDR90Q96KV7 1748 aa19.48■□□□□ 0.71
LINC00116-203ENST00000611969 COG3Q96JB2 828 aa19.47■□□□□ 0.71
LINC00116-203ENST00000611969 CARD11Q9BXL7 1154 aa19.47■□□□□ 0.71
LINC00116-203ENST00000611969 PHF14O94880 888 aa19.46■□□□□ 0.71
LINC00116-203ENST00000611969 FLAD1Q8NFF5 587 aa19.46■□□□□ 0.71
LINC00116-203ENST00000611969 RRS1Q15050 365 aaKnown RBP19.45■□□□□ 0.7
LINC00116-203ENST00000611969 BRCA1P38398 1863 aaKnown RBP19.45■□□□□ 0.7
LINC00116-203ENST00000611969 PCDH11XQ9BZA7 1347 aa19.45■□□□□ 0.7
LINC00116-203ENST00000611969 PCDH11YQ9BZA8 1340 aa19.45■□□□□ 0.7
LINC00116-203ENST00000611969 SMG6Q86US8 1419 aaKnown RBP19.44■□□□□ 0.7
LINC00116-203ENST00000611969 MPRIPQ6WCQ1 1025 aa19.44■□□□□ 0.7
LINC00116-203ENST00000611969 AK7Q96M32 723 aa19.44■□□□□ 0.7
LINC00116-203ENST00000611969 CGNL1Q0VF96 1302 aa19.44■□□□□ 0.7
LINC00116-203ENST00000611969 PXDNLA1KZ92 1463 aa19.43■□□□□ 0.7
LINC00116-203ENST00000611969 RAPGEF4Q8WZA2 1011 aa19.43■□□□□ 0.7
LINC00116-203ENST00000611969 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.42■□□□□ 0.7
LINC00116-203ENST00000611969 NSD3Q9BZ95 1437 aa19.42■□□□□ 0.7
LINC00116-203ENST00000611969 CYP27B1O15528 508 aa19.41■□□□□ 0.7
LINC00116-203ENST00000611969 TATP17735 454 aaPredicted RBP19.41■□□□□ 0.7
LINC00116-203ENST00000611969 APLP1P51693 650 aa19.4■□□□□ 0.7
LINC00116-203ENST00000611969 DNAJC5GQ8N7S2 189 aa19.39■□□□□ 0.69
LINC00116-203ENST00000611969 LINC00116Q8NCU8 138 aa19.39■□□□□ 0.69
LINC00116-203ENST00000611969 PUS7Q96PZ0 661 aaKnown RBP19.39■□□□□ 0.69
LINC00116-203ENST00000611969 ANKRD26Q9UPS8 1709 aa19.39■□□□□ 0.69
LINC00116-203ENST00000611969 TESK2Q96S53 571 aa19.38■□□□□ 0.69
LINC00116-203ENST00000611969 INSRP06213 1382 aa19.37■□□□□ 0.69
LINC00116-203ENST00000611969 HSP90AB2PQ58FF8 381 aa19.37■□□□□ 0.69
LINC00116-203ENST00000611969 GGNBP2Q9H3C7 697 aa19.37■□□□□ 0.69
LINC00116-203ENST00000611969 ARFGEF1Q9Y6D6 1849 aa19.37■□□□□ 0.69
LINC00116-203ENST00000611969 C4AP0C0L4 1744 aa19.37■□□□□ 0.69
LINC00116-203ENST00000611969 SSFA2P28290 1259 aa19.36■□□□□ 0.69
LINC00116-203ENST00000611969 TRIM26Q12899 539 aaPredicted RBP19.36■□□□□ 0.69
LINC00116-203ENST00000611969 PIGBQ92521 554 aa19.36■□□□□ 0.69
LINC00116-203ENST00000611969 SMARCC1Q92922 1105 aaPredicted RBP19.36■□□□□ 0.69
LINC00116-203ENST00000611969 COL5A3P25940 1745 aaPredicted RBP19.36■□□□□ 0.69
LINC00116-203ENST00000611969 C10orf71Q711Q0 1435 aa19.35■□□□□ 0.69
LINC00116-203ENST00000611969 NMRK2Q9NPI5 230 aa19.35■□□□□ 0.69
LINC00116-203ENST00000611969 NCAPD2Q15021 1401 aa19.34■□□□□ 0.69
LINC00116-203ENST00000611969 FLT4P35916 1363 aa19.34■□□□□ 0.69
LINC00116-203ENST00000611969 FYB1O15117 783 aa19.34■□□□□ 0.69
LINC00116-203ENST00000611969 TOMM70O94826 608 aa19.34■□□□□ 0.69
LINC00116-203ENST00000611969 ITPK1Q13572 414 aa19.34■□□□□ 0.69
LINC00116-203ENST00000611969 LOC102724428A0A0B4J2F2 783 aa19.33■□□□□ 0.68
LINC00116-203ENST00000611969 GNPATO15228 680 aa19.33■□□□□ 0.68
LINC00116-203ENST00000611969 MMP10P09238 476 aa19.33■□□□□ 0.68
LINC00116-203ENST00000611969 SIK1P57059 783 aa19.33■□□□□ 0.68
LINC00116-203ENST00000611969 HMGB2P26583 209 aaKnown RBP19.32■□□□□ 0.68
LINC00116-203ENST00000611969 HTRA3P83110 453 aa19.32■□□□□ 0.68
LINC00116-203ENST00000611969 BCS1LQ9Y276 419 aa19.31■□□□□ 0.68
LINC00116-203ENST00000611969 ZNF831Q5JPB2 1677 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms