RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 SMG6Q86US8 1419 aaKnown RBP18.69■□□□□ 0.58
HMGB1P24-201ENST00000611897 TMF1P82094 1093 aa18.69■□□□□ 0.58
HMGB1P24-201ENST00000611897 ZCRB1Q8TBF4 217 aaKnown RBP18.69■□□□□ 0.58
HMGB1P24-201ENST00000611897 RTL1A6NKG5 1358 aa18.68■□□□□ 0.58
HMGB1P24-201ENST00000611897 SGIP1Q9BQI5 828 aa18.68■□□□□ 0.58
HMGB1P24-201ENST00000611897 SLC24A1O60721 1099 aa18.67■□□□□ 0.58
HMGB1P24-201ENST00000611897 TFCP2L1Q9NZI6 479 aa18.67■□□□□ 0.58
HMGB1P24-201ENST00000611897 SLC27A3Q5K4L6 730 aa18.66■□□□□ 0.58
HMGB1P24-201ENST00000611897 NBPF6Q5VWK0 638 aa18.66■□□□□ 0.58
HMGB1P24-201ENST00000611897 PELP1Q8IZL8 1130 aaKnown RBP18.66■□□□□ 0.58
HMGB1P24-201ENST00000611897 RAPGEF4Q8WZA2 1011 aa18.66■□□□□ 0.58
HMGB1P24-201ENST00000611897 NBPF4Q96M43 638 aa18.66■□□□□ 0.58
HMGB1P24-201ENST00000611897 CHD4Q14839 1912 aa18.66■□□□□ 0.58
HMGB1P24-201ENST00000611897 QSER1Q2KHR3 1735 aa18.66■□□□□ 0.58
HMGB1P24-201ENST00000611897 FYB1O15117 783 aa18.65■□□□□ 0.58
HMGB1P24-201ENST00000611897 MSH5O43196 834 aa18.65■□□□□ 0.58
HMGB1P24-201ENST00000611897 AKT1S1Q96B36 256 aa18.65■□□□□ 0.58
HMGB1P24-201ENST00000611897 PNPLA7Q6ZV29 1317 aa18.65■□□□□ 0.58
HMGB1P24-201ENST00000611897 LY75O60449 1722 aa18.65■□□□□ 0.58
HMGB1P24-201ENST00000611897 UTRNP46939 3433 aa18.64■□□□□ 0.57
HMGB1P24-201ENST00000611897 POLD1P28340 1107 aa18.64■□□□□ 0.57
HMGB1P24-201ENST00000611897 CCNL1Q9UK58 526 aaPredicted RBP18.64■□□□□ 0.57
HMGB1P24-201ENST00000611897 NSD2O96028 1365 aa18.64■□□□□ 0.57
HMGB1P24-201ENST00000611897 TATP17735 454 aaPredicted RBP18.62■□□□□ 0.57
HMGB1P24-201ENST00000611897 GPR162Q16538 588 aa18.62■□□□□ 0.57
HMGB1P24-201ENST00000611897 HSP90AB2PQ58FF8 381 aa18.62■□□□□ 0.57
HMGB1P24-201ENST00000611897 TRIM26Q12899 539 aaPredicted RBP18.61■□□□□ 0.57
HMGB1P24-201ENST00000611897 ZNF784Q8NCA9 323 aaPredicted RBP18.61■□□□□ 0.57
HMGB1P24-201ENST00000611897 NSD3Q9BZ95 1437 aa18.6■□□□□ 0.57
HMGB1P24-201ENST00000611897 FLT4P35916 1363 aa18.6■□□□□ 0.57
HMGB1P24-201ENST00000611897 PPM1GO15355 546 aaPredicted RBP18.6■□□□□ 0.57
HMGB1P24-201ENST00000611897 CDCA8Q53HL2 280 aa18.6■□□□□ 0.57
HMGB1P24-201ENST00000611897 SLC16A10Q8TF71 515 aa18.6■□□□□ 0.57
HMGB1P24-201ENST00000611897 POLR3GLQ9BT43 218 aa18.59■□□□□ 0.57
HMGB1P24-201ENST00000611897 INSRP06213 1382 aa18.58■□□□□ 0.57
HMGB1P24-201ENST00000611897 MAP3K5Q99683 1374 aa18.58■□□□□ 0.57
HMGB1P24-201ENST00000611897 PCDH11XQ9BZA7 1347 aa18.58■□□□□ 0.57
HMGB1P24-201ENST00000611897 PCDH11YQ9BZA8 1340 aa18.58■□□□□ 0.57
HMGB1P24-201ENST00000611897 MSL1Q68DK7 614 aa18.58■□□□□ 0.56
HMGB1P24-201ENST00000611897 C5P01031 1676 aa18.57■□□□□ 0.56
HMGB1P24-201ENST00000611897 CGNL1Q0VF96 1302 aa18.57■□□□□ 0.56
HMGB1P24-201ENST00000611897 EMILIN1Q9Y6C2 1016 aa18.57■□□□□ 0.56
HMGB1P24-201ENST00000611897 MPRIPQ6WCQ1 1025 aa18.56■□□□□ 0.56
HMGB1P24-201ENST00000611897 NLGN2Q8NFZ4 835 aa18.56■□□□□ 0.56
HMGB1P24-201ENST00000611897 COL24A1Q17RW2 1714 aa18.55■□□□□ 0.56
HMGB1P24-201ENST00000611897 TOGARAM1Q9Y4F4 1720 aa18.55■□□□□ 0.56
HMGB1P24-201ENST00000611897 GOLGB1Q14789 3259 aaKnown RBP18.55■□□□□ 0.56
HMGB1P24-201ENST00000611897 PALLDQ8WX93 1383 aa18.55■□□□□ 0.56
HMGB1P24-201ENST00000611897 ITGB4P16144 1822 aa18.54■□□□□ 0.56
HMGB1P24-201ENST00000611897 COL23A1Q86Y22 540 aaPredicted RBP18.54■□□□□ 0.56
HMGB1P24-201ENST00000611897 CARD14Q9BXL6 1004 aa18.54■□□□□ 0.56
HMGB1P24-201ENST00000611897 TAF1LQ8IZX4 1826 aa18.53■□□□□ 0.56
HMGB1P24-201ENST00000611897 PKD1L3Q7Z443 1732 aa18.52■□□□□ 0.56
HMGB1P24-201ENST00000611897 MAP2P11137 1827 aaKnown RBP18.52■□□□□ 0.56
HMGB1P24-201ENST00000611897 CYP27B1O15528 508 aa18.52■□□□□ 0.56
HMGB1P24-201ENST00000611897 KIF24Q5T7B8 1368 aa18.52■□□□□ 0.55
HMGB1P24-201ENST00000611897 ANKRD26Q9UPS8 1709 aa18.5■□□□□ 0.55
HMGB1P24-201ENST00000611897 TNNT2P45379 298 aaPredicted RBP18.5■□□□□ 0.55
HMGB1P24-201ENST00000611897 PCGF6Q9BYE7 350 aa18.5■□□□□ 0.55
HMGB1P24-201ENST00000611897 PHF14O94880 888 aa18.49■□□□□ 0.55
HMGB1P24-201ENST00000611897 AK7Q96M32 723 aa18.49■□□□□ 0.55
HMGB1P24-201ENST00000611897 C4BP0C0L5 1744 aa18.49■□□□□ 0.55
HMGB1P24-201ENST00000611897 SENP3-EIF4A1A0A087X0R7 540 aa18.47■□□□□ 0.55
HMGB1P24-201ENST00000611897 SPG7Q9UQ90 795 aa18.47■□□□□ 0.55
HMGB1P24-201ENST00000611897 SMIM5Q71RC9 77 aa18.46■□□□□ 0.55
HMGB1P24-201ENST00000611897 SMARCC1Q92922 1105 aaPredicted RBP18.46■□□□□ 0.55
HMGB1P24-201ENST00000611897 YBX3P16989 372 aaKnown RBP eCLIP18.45■□□□□ 0.54
HMGB1P24-201ENST00000611897 PIGBQ92521 554 aa18.45■□□□□ 0.54
HMGB1P24-201ENST00000611897 EYA1Q99502 592 aa18.45■□□□□ 0.54
HMGB1P24-201ENST00000611897 WWC3Q9ULE0 1092 aa18.45■□□□□ 0.54
HMGB1P24-201ENST00000611897 UBR3Q6ZT12 1888 aa18.44■□□□□ 0.54
HMGB1P24-201ENST00000611897 TMOD3Q9NYL9 352 aa18.44■□□□□ 0.54
HMGB1P24-201ENST00000611897 AMIGO3Q86WK7 504 aa18.43■□□□□ 0.54
HMGB1P24-201ENST00000611897 FLAD1Q8NFF5 587 aa18.43■□□□□ 0.54
HMGB1P24-201ENST00000611897 WASHC2AQ641Q2 1341 aa18.43■□□□□ 0.54
HMGB1P24-201ENST00000611897 NCAPD2Q15021 1401 aa18.42■□□□□ 0.54
HMGB1P24-201ENST00000611897 GIGYF1O75420 1035 aaPredicted RBP18.42■□□□□ 0.54
HMGB1P24-201ENST00000611897 C1QTNF8P60827 252 aa18.42■□□□□ 0.54
HMGB1P24-201ENST00000611897 POLKQ9UBT6 870 aa18.42■□□□□ 0.54
HMGB1P24-201ENST00000611897 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.41■□□□□ 0.54
HMGB1P24-201ENST00000611897 LOC102724428A0A0B4J2F2 783 aa18.4■□□□□ 0.54
HMGB1P24-201ENST00000611897 GRIN3BO60391 1043 aa18.4■□□□□ 0.54
HMGB1P24-201ENST00000611897 HMGB2P26583 209 aaKnown RBP18.4■□□□□ 0.54
HMGB1P24-201ENST00000611897 SIK1P57059 783 aa18.4■□□□□ 0.54
HMGB1P24-201ENST00000611897 LINC00116Q8NCU8 138 aa18.4■□□□□ 0.54
HMGB1P24-201ENST00000611897 ASAP1Q9ULH1 1129 aa18.4■□□□□ 0.54
HMGB1P24-201ENST00000611897 GNPATO15228 680 aa18.39■□□□□ 0.53
HMGB1P24-201ENST00000611897 EIF4A2Q14240 407 aaKnown RBP18.39■□□□□ 0.53
HMGB1P24-201ENST00000611897 IFNL2Q8IZJ0 200 aa18.39■□□□□ 0.53
HMGB1P24-201ENST00000611897 PHKG2P15735 406 aa18.38■□□□□ 0.53
HMGB1P24-201ENST00000611897 NKX1-1Q15270 411 aaPredicted RBP18.38■□□□□ 0.53
HMGB1P24-201ENST00000611897 TIMELESSQ9UNS1 1208 aa18.38■□□□□ 0.53
HMGB1P24-201ENST00000611897 ATP6V1AP38606 617 aa18.37■□□□□ 0.53
HMGB1P24-201ENST00000611897 CD2APQ9Y5K6 639 aa18.37■□□□□ 0.53
HMGB1P24-201ENST00000611897 HSPA5P11021 654 aaKnown RBP18.36■□□□□ 0.53
HMGB1P24-201ENST00000611897 ITPK1Q13572 414 aa18.36■□□□□ 0.53
HMGB1P24-201ENST00000611897 IGSF1Q8N6C5 1336 aa18.35■□□□□ 0.53
HMGB1P24-201ENST00000611897 SSFA2P28290 1259 aa18.35■□□□□ 0.53
HMGB1P24-201ENST00000611897 EIF4G2P78344 907 aaKnown RBP eCLIP18.35■□□□□ 0.53
HMGB1P24-201ENST00000611897 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms