RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 AFDNP55196 1824 aaKnown RBP9.95□□□□□ -0.82
CBWD1-219ENST00000611457 AXIN2Q9Y2T1 843 aa9.95□□□□□ -0.82
CBWD1-219ENST00000611457 PCDH11XQ9BZA7 1347 aa9.94□□□□□ -0.82
CBWD1-219ENST00000611457 PCDH11YQ9BZA8 1340 aa9.94□□□□□ -0.82
CBWD1-219ENST00000611457 KDM6AO15550 1401 aaPredicted RBP9.94□□□□□ -0.82
CBWD1-219ENST00000611457 NLRP6P59044 892 aa9.94□□□□□ -0.82
CBWD1-219ENST00000611457 NME9Q86XW9 330 aa9.93□□□□□ -0.82
CBWD1-219ENST00000611457 HEG1Q9ULI3 1381 aa9.92□□□□□ -0.82
CBWD1-219ENST00000611457 HTATSF1O43719 755 aaKnown RBP9.92□□□□□ -0.82
CBWD1-219ENST00000611457 IL2RBP14784 551 aa9.92□□□□□ -0.82
CBWD1-219ENST00000611457 BABAM1Q9NWV8 329 aa9.92□□□□□ -0.82
CBWD1-219ENST00000611457 LARP1Q6PKG0 1096 aaKnown RBP9.92□□□□□ -0.82
CBWD1-219ENST00000611457 POLKQ9UBT6 870 aa9.92□□□□□ -0.82
CBWD1-219ENST00000611457 GTF3C3Q9Y5Q9 886 aa9.92□□□□□ -0.82
CBWD1-219ENST00000611457 ZNF646O15015 1829 aaPredicted RBP9.91□□□□□ -0.82
CBWD1-219ENST00000611457 ANKRD24Q8TF21 1146 aa9.91□□□□□ -0.82
CBWD1-219ENST00000611457 C10orf71Q711Q0 1435 aa9.91□□□□□ -0.82
CBWD1-219ENST00000611457 A0A1B0GUL6 1792 aa9.9□□□□□ -0.82
CBWD1-219ENST00000611457 IL13P35225 146 aa9.9□□□□□ -0.82
CBWD1-219ENST00000611457 NEUROD1Q13562 356 aa9.9□□□□□ -0.82
CBWD1-219ENST00000611457 ANKRD31Q8N7Z5 1873 aa9.9□□□□□ -0.82
CBWD1-219ENST00000611457 PSME4Q14997 1843 aa9.9□□□□□ -0.82
CBWD1-219ENST00000611457 TNRC6CQ9HCJ0 1690 aaKnown RBP9.9□□□□□ -0.82
CBWD1-219ENST00000611457 MYH14Q7Z406 1995 aaKnown RBP9.9□□□□□ -0.83
CBWD1-219ENST00000611457 PXDNLA1KZ92 1463 aa9.89□□□□□ -0.83
CBWD1-219ENST00000611457 ERVV-2B6SEH9 535 aa9.89□□□□□ -0.83
CBWD1-219ENST00000611457 AMOTQ4VCS5 1084 aa9.89□□□□□ -0.83
CBWD1-219ENST00000611457 MARCH10Q8NA82 808 aaPredicted RBP9.89□□□□□ -0.83
CBWD1-219ENST00000611457 AKT1S1Q96B36 256 aa9.89□□□□□ -0.83
CBWD1-219ENST00000611457 LTBP1Q14766 1721 aa9.88□□□□□ -0.83
CBWD1-219ENST00000611457 SGIP1Q9BQI5 828 aa9.88□□□□□ -0.83
CBWD1-219ENST00000611457 HSP90AB1P08238 724 aaKnown RBP9.87□□□□□ -0.83
CBWD1-219ENST00000611457 CNTNAP4Q9C0A0 1308 aa9.87□□□□□ -0.83
CBWD1-219ENST00000611457 RC3H1Q5TC82 1133 aaKnown RBP9.87□□□□□ -0.83
CBWD1-219ENST00000611457 SLC16A10Q8TF71 515 aa9.87□□□□□ -0.83
CBWD1-219ENST00000611457 SOS1Q07889 1333 aaPredicted RBP9.87□□□□□ -0.83
CBWD1-219ENST00000611457 ADAMTS2O95450 1211 aa9.86□□□□□ -0.83
CBWD1-219ENST00000611457 BAG6P46379 1132 aa9.86□□□□□ -0.83
CBWD1-219ENST00000611457 CABLES1Q8TDN4 633 aa9.86□□□□□ -0.83
CBWD1-219ENST00000611457 NUTM2BA6NNL0 878 aaPredicted RBP9.86□□□□□ -0.83
CBWD1-219ENST00000611457 NUTM2EB1AL46 878 aaPredicted RBP9.86□□□□□ -0.83
CBWD1-219ENST00000611457 SAFB2Q14151 953 aaKnown RBP eCLIP9.86□□□□□ -0.83
CBWD1-219ENST00000611457 NUTM2AQ8IVF1 878 aaPredicted RBP9.86□□□□□ -0.83
CBWD1-219ENST00000611457 XPCQ01831 940 aaPredicted RBP9.85□□□□□ -0.83
CBWD1-219ENST00000611457 VSIG10Q8N0Z9 540 aa9.85□□□□□ -0.83
CBWD1-219ENST00000611457 FER1L6Q2WGJ9 1857 aa9.85□□□□□ -0.83
CBWD1-219ENST00000611457 COL11A2P13942 1736 aaPredicted RBP9.85□□□□□ -0.83
CBWD1-219ENST00000611457 NUP98P52948 1817 aa9.85□□□□□ -0.83
CBWD1-219ENST00000611457 RALBP1Q15311 655 aa9.84□□□□□ -0.83
CBWD1-219ENST00000611457 DDB1Q16531 1140 aa9.84□□□□□ -0.83
CBWD1-219ENST00000611457 EIF4A2Q14240 407 aaKnown RBP9.83□□□□□ -0.84
CBWD1-219ENST00000611457 SMARCC1Q92922 1105 aaPredicted RBP9.83□□□□□ -0.84
CBWD1-219ENST00000611457 PANK3Q9H999 370 aa9.83□□□□□ -0.84
CBWD1-219ENST00000611457 ARAP2Q8WZ64 1704 aa9.83□□□□□ -0.84
CBWD1-219ENST00000611457 ADRA2BP18089 450 aa9.82□□□□□ -0.84
CBWD1-219ENST00000611457 TIAM2Q8IVF5 1701 aa9.82□□□□□ -0.84
CBWD1-219ENST00000611457 SBF1O95248 1867 aa9.82□□□□□ -0.84
CBWD1-219ENST00000611457 THSD7BQ9C0I4 1608 aa9.82□□□□□ -0.84
CBWD1-219ENST00000611457 NBPF6Q5VWK0 638 aa9.82□□□□□ -0.84
CBWD1-219ENST00000611457 FLAD1Q8NFF5 587 aa9.82□□□□□ -0.84
CBWD1-219ENST00000611457 NBPF4Q96M43 638 aa9.82□□□□□ -0.84
CBWD1-219ENST00000611457 ADAMTSL1Q8N6G6 1762 aa9.81□□□□□ -0.84
CBWD1-219ENST00000611457 EXOC5O00471 708 aa9.81□□□□□ -0.84
CBWD1-219ENST00000611457 SPG7Q9UQ90 795 aa9.81□□□□□ -0.84
CBWD1-219ENST00000611457 PHKG2P15735 406 aa9.81□□□□□ -0.84
CBWD1-219ENST00000611457 FAM98CQ17RN3 349 aaKnown RBP9.81□□□□□ -0.84
CBWD1-219ENST00000611457 ZCRB1Q8TBF4 217 aaKnown RBP9.81□□□□□ -0.84
CBWD1-219ENST00000611457 ZRANB1Q9UGI0 708 aa9.81□□□□□ -0.84
CBWD1-219ENST00000611457 NGEFQ8N5V2 710 aa9.81□□□□□ -0.84
CBWD1-219ENST00000611457 ZNF609O15014 1411 aa9.8□□□□□ -0.84
CBWD1-219ENST00000611457 DCAF5Q96JK2 942 aa9.8□□□□□ -0.84
CBWD1-219ENST00000611457 WDR90Q96KV7 1748 aa9.8□□□□□ -0.84
CBWD1-219ENST00000611457 PAK3O75914 559 aaPredicted RBP9.79□□□□□ -0.84
CBWD1-219ENST00000611457 AKAP4Q5JQC9 854 aa9.79□□□□□ -0.84
CBWD1-219ENST00000611457 EYA1Q99502 592 aa9.79□□□□□ -0.84
CBWD1-219ENST00000611457 TATP17735 454 aaPredicted RBP9.79□□□□□ -0.84
CBWD1-219ENST00000611457 EVA1CP58658 441 aa9.79□□□□□ -0.84
CBWD1-219ENST00000611457 PROM2Q8N271 834 aa9.79□□□□□ -0.84
CBWD1-219ENST00000611457 ERBB4Q15303 1308 aa9.79□□□□□ -0.84
CBWD1-219ENST00000611457 ZC3H6P61129 1189 aaKnown RBP9.78□□□□□ -0.84
CBWD1-219ENST00000611457 PLEKHF1Q96S99 279 aa9.78□□□□□ -0.84
CBWD1-219ENST00000611457 MYH3P11055 1940 aa9.78□□□□□ -0.84
CBWD1-219ENST00000611457 CHRNA2Q15822 529 aa9.78□□□□□ -0.84
CBWD1-219ENST00000611457 LMOD2Q6P5Q4 547 aa9.78□□□□□ -0.84
CBWD1-219ENST00000611457 TOM1L2Q6ZVM7 507 aa9.78□□□□□ -0.84
CBWD1-219ENST00000611457 CCER1Q8TC90 406 aaPredicted RBP9.78□□□□□ -0.84
CBWD1-219ENST00000611457 ADCY9O60503 1353 aa9.77□□□□□ -0.85
CBWD1-219ENST00000611457 FCHSD2O94868 740 aa9.77□□□□□ -0.85
CBWD1-219ENST00000611457 NUTM2FA1L443 756 aa9.77□□□□□ -0.85
CBWD1-219ENST00000611457 ZBTB22O15209 634 aa9.77□□□□□ -0.85
CBWD1-219ENST00000611457 CYP27B1O15528 508 aa9.77□□□□□ -0.85
CBWD1-219ENST00000611457 IFNL2Q8IZJ0 200 aa9.77□□□□□ -0.85
CBWD1-219ENST00000611457 RSPH6AQ9H0K4 717 aa9.77□□□□□ -0.85
CBWD1-219ENST00000611457 SSFA2P28290 1259 aa9.76□□□□□ -0.85
CBWD1-219ENST00000611457 DIEXFQ68CQ4 756 aaKnown RBP9.76□□□□□ -0.85
CBWD1-219ENST00000611457 KNSTRNQ9Y448 316 aa9.76□□□□□ -0.85
CBWD1-219ENST00000611457 ATP10DQ9P241 1426 aa9.76□□□□□ -0.85
CBWD1-219ENST00000611457 HAP1P54257 671 aaPredicted RBP9.76□□□□□ -0.85
CBWD1-219ENST00000611457 PDE3BQ13370 1112 aa9.76□□□□□ -0.85
CBWD1-219ENST00000611457 SNED1Q8TER0 1413 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms