RNA–Protein interactions for RNA: ENST00000611010.4

FDPS-220, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 5 BASIC

Gene FDPS, Length 1,196 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-220ENST00000611010 MAP3K19Q56UN5 1328 aa16.79■□□□□ 0.28
FDPS-220ENST00000611010 C1QTNF8P60827 252 aa16.79■□□□□ 0.28
FDPS-220ENST00000611010 DDX54Q8TDD1 881 aaKnown RBP16.79■□□□□ 0.28
FDPS-220ENST00000611010 PKD1L3Q7Z443 1732 aa16.79■□□□□ 0.28
FDPS-220ENST00000611010 SLC27A3Q5K4L6 730 aa16.78■□□□□ 0.28
FDPS-220ENST00000611010 HDGFL2Q7Z4V5 671 aaPredicted RBP16.78■□□□□ 0.28
FDPS-220ENST00000611010 LTV1Q96GA3 475 aaPredicted RBP16.78■□□□□ 0.28
FDPS-220ENST00000611010 UBR3Q6ZT12 1888 aa16.78■□□□□ 0.28
FDPS-220ENST00000611010 SENP3-EIF4A1A0A087X0R7 540 aa16.77■□□□□ 0.28
FDPS-220ENST00000611010 HOXC9P31274 260 aa16.77■□□□□ 0.28
FDPS-220ENST00000611010 TESK2Q96S53 571 aa16.77■□□□□ 0.28
FDPS-220ENST00000611010 PRIM1P49642 420 aaKnown RBP16.76■□□□□ 0.27
FDPS-220ENST00000611010 SLC16A10Q8TF71 515 aa16.76■□□□□ 0.27
FDPS-220ENST00000611010 CEP350Q5VT06 3117 aa16.76■□□□□ 0.27
FDPS-220ENST00000611010 ANKRD26Q9UPS8 1709 aa16.76■□□□□ 0.27
FDPS-220ENST00000611010 MAP2P11137 1827 aaKnown RBP16.75■□□□□ 0.27
FDPS-220ENST00000611010 GPR162Q16538 588 aa16.75■□□□□ 0.27
FDPS-220ENST00000611010 KLHL34Q8N239 644 aa16.75■□□□□ 0.27
FDPS-220ENST00000611010 C4BP0C0L5 1744 aa16.75■□□□□ 0.27
FDPS-220ENST00000611010 YBX3P16989 372 aaKnown RBP eCLIP16.74■□□□□ 0.27
FDPS-220ENST00000611010 TERF2IPQ9NYB0 399 aa16.74■□□□□ 0.27
FDPS-220ENST00000611010 RTL1A6NKG5 1358 aa16.74■□□□□ 0.27
FDPS-220ENST00000611010 SYTL4Q96C24 671 aaPredicted RBP16.73■□□□□ 0.27
FDPS-220ENST00000611010 TFCP2L1Q9NZI6 479 aa16.73■□□□□ 0.27
FDPS-220ENST00000611010 PUS7Q96PZ0 661 aaKnown RBP16.72■□□□□ 0.27
FDPS-220ENST00000611010 POLD1P28340 1107 aa16.71■□□□□ 0.27
FDPS-220ENST00000611010 COL23A1Q86Y22 540 aaPredicted RBP16.71■□□□□ 0.27
FDPS-220ENST00000611010 USHBP1Q8N6Y0 703 aa16.71■□□□□ 0.27
FDPS-220ENST00000611010 KIAA1551Q9HCM1 1747 aa16.7■□□□□ 0.26
FDPS-220ENST00000611010 RRS1Q15050 365 aaKnown RBP16.7■□□□□ 0.26
FDPS-220ENST00000611010 NBPF6Q5VWK0 638 aa16.7■□□□□ 0.26
FDPS-220ENST00000611010 PELP1Q8IZL8 1130 aaKnown RBP16.7■□□□□ 0.26
FDPS-220ENST00000611010 ZCRB1Q8TBF4 217 aaKnown RBP16.7■□□□□ 0.26
FDPS-220ENST00000611010 NBPF4Q96M43 638 aa16.7■□□□□ 0.26
FDPS-220ENST00000611010 CCNL1Q9UK58 526 aaPredicted RBP16.7■□□□□ 0.26
FDPS-220ENST00000611010 MSL1Q68DK7 614 aa16.69■□□□□ 0.26
FDPS-220ENST00000611010 AMIGO3Q86WK7 504 aa16.69■□□□□ 0.26
FDPS-220ENST00000611010 COG3Q96JB2 828 aa16.69■□□□□ 0.26
FDPS-220ENST00000611010 ST20-MTHFSA0A0A6YYL1 179 aa16.68■□□□□ 0.26
FDPS-220ENST00000611010 GIGYF1O75420 1035 aaPredicted RBP16.68■□□□□ 0.26
FDPS-220ENST00000611010 NCAPD2Q15021 1401 aa16.68■□□□□ 0.26
FDPS-220ENST00000611010 ADCY9O60503 1353 aa16.67■□□□□ 0.26
FDPS-220ENST00000611010 TONSLQ96HA7 1378 aa16.67■□□□□ 0.26
FDPS-220ENST00000611010 USP47Q96K76 1375 aa16.67■□□□□ 0.26
FDPS-220ENST00000611010 AMPHP49418 695 aa16.67■□□□□ 0.26
FDPS-220ENST00000611010 ATP10DQ9P241 1426 aa16.67■□□□□ 0.26
FDPS-220ENST00000611010 PALLDQ8WX93 1383 aa16.65■□□□□ 0.26
FDPS-220ENST00000611010 GGNBP2Q9H3C7 697 aa16.65■□□□□ 0.26
FDPS-220ENST00000611010 CICQ96RK0 1608 aaPredicted RBP16.65■□□□□ 0.26
FDPS-220ENST00000611010 KIF13BQ9NQT8 1826 aa16.65■□□□□ 0.26
FDPS-220ENST00000611010 FYB1O15117 783 aa16.64■□□□□ 0.25
FDPS-220ENST00000611010 INSRP06213 1382 aa16.64■□□□□ 0.25
FDPS-220ENST00000611010 SMG6Q86US8 1419 aaKnown RBP16.63■□□□□ 0.25
FDPS-220ENST00000611010 CYP27B1O15528 508 aa16.62■□□□□ 0.25
FDPS-220ENST00000611010 HSP90AB2PQ58FF8 381 aa16.62■□□□□ 0.25
FDPS-220ENST00000611010 SMIM5Q71RC9 77 aa16.62■□□□□ 0.25
FDPS-220ENST00000611010 CGNL1Q0VF96 1302 aa16.62■□□□□ 0.25
FDPS-220ENST00000611010 FLT4P35916 1363 aa16.62■□□□□ 0.25
FDPS-220ENST00000611010 MSH5O43196 834 aa16.61■□□□□ 0.25
FDPS-220ENST00000611010 PCDH11XQ9BZA7 1347 aa16.61■□□□□ 0.25
FDPS-220ENST00000611010 PCDH11YQ9BZA8 1340 aa16.61■□□□□ 0.25
FDPS-220ENST00000611010 COL5A3P25940 1745 aaPredicted RBP16.61■□□□□ 0.25
FDPS-220ENST00000611010 N4BP2Q86UW6 1770 aaPredicted RBP16.61■□□□□ 0.25
FDPS-220ENST00000611010 BRCA1P38398 1863 aaKnown RBP16.61■□□□□ 0.25
FDPS-220ENST00000611010 RAPGEF4Q8WZA2 1011 aa16.59■□□□□ 0.25
FDPS-220ENST00000611010 C4AP0C0L4 1744 aa16.59■□□□□ 0.25
FDPS-220ENST00000611010 GRIN3BO60391 1043 aa16.58■□□□□ 0.24
FDPS-220ENST00000611010 TATP17735 454 aaPredicted RBP16.58■□□□□ 0.24
FDPS-220ENST00000611010 ZEB1P37275 1124 aaPredicted RBP16.58■□□□□ 0.24
FDPS-220ENST00000611010 KIF24Q5T7B8 1368 aa16.58■□□□□ 0.24
FDPS-220ENST00000611010 ZNF831Q5JPB2 1677 aa16.57■□□□□ 0.24
FDPS-220ENST00000611010 MPRIPQ6WCQ1 1025 aa16.57■□□□□ 0.24
FDPS-220ENST00000611010 CD2APQ9Y5K6 639 aa16.57■□□□□ 0.24
FDPS-220ENST00000611010 EMILIN1Q9Y6C2 1016 aa16.57■□□□□ 0.24
FDPS-220ENST00000611010 NSD3Q9BZ95 1437 aa16.56■□□□□ 0.24
FDPS-220ENST00000611010 PIGBQ92521 554 aa16.55■□□□□ 0.24
FDPS-220ENST00000611010 CARD14Q9BXL6 1004 aa16.55■□□□□ 0.24
FDPS-220ENST00000611010 WWC3Q9ULE0 1092 aa16.55■□□□□ 0.24
FDPS-220ENST00000611010 IGSF1Q8N6C5 1336 aa16.54■□□□□ 0.24
FDPS-220ENST00000611010 LINC00116Q8NCU8 138 aa16.54■□□□□ 0.24
FDPS-220ENST00000611010 PXDNLA1KZ92 1463 aa16.54■□□□□ 0.24
FDPS-220ENST00000611010 PHF14O94880 888 aa16.53■□□□□ 0.24
FDPS-220ENST00000611010 IFFO2Q5TF58 517 aa16.53■□□□□ 0.24
FDPS-220ENST00000611010 MYH14Q7Z406 1995 aaKnown RBP16.53■□□□□ 0.24
FDPS-220ENST00000611010 KDRP35968 1356 aa16.52■□□□□ 0.24
FDPS-220ENST00000611010 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.52■□□□□ 0.24
FDPS-220ENST00000611010 ITPK1Q13572 414 aa16.52■□□□□ 0.24
FDPS-220ENST00000611010 NKX1-1Q15270 411 aaPredicted RBP16.52■□□□□ 0.24
FDPS-220ENST00000611010 FLAD1Q8NFF5 587 aa16.51■□□□□ 0.23
FDPS-220ENST00000611010 ZNF526Q8TF50 670 aaPredicted RBP16.51■□□□□ 0.23
FDPS-220ENST00000611010 AK7Q96M32 723 aa16.51■□□□□ 0.23
FDPS-220ENST00000611010 ARFGEF1Q9Y6D6 1849 aa16.5■□□□□ 0.23
FDPS-220ENST00000611010 TMF1P82094 1093 aa16.5■□□□□ 0.23
FDPS-220ENST00000611010 GPBP1L1Q9HC44 474 aaPredicted RBP16.5■□□□□ 0.23
FDPS-220ENST00000611010 TJP1Q07157 1748 aa16.5■□□□□ 0.23
FDPS-220ENST00000611010 LOC102724428A0A0B4J2F2 783 aa16.49■□□□□ 0.23
FDPS-220ENST00000611010 SSFA2P28290 1259 aa16.49■□□□□ 0.23
FDPS-220ENST00000611010 SIK1P57059 783 aa16.49■□□□□ 0.23
FDPS-220ENST00000611010 SMARCC1Q92922 1105 aaPredicted RBP16.49■□□□□ 0.23
FDPS-220ENST00000611010 ADAMTS7Q9UKP4 1686 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms