RNA–Protein interactions for RNA: ENST00000610088.5

LINC01278-206, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 4 BASIC

Gene LINC01278, Length 554 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-206ENST00000610088 IGSF1Q8N6C5 1336 aa18.38■□□□□ 0.53
LINC01278-206ENST00000610088 TONSLQ96HA7 1378 aa18.38■□□□□ 0.53
LINC01278-206ENST00000610088 KCNH5Q8NCM2 988 aa18.37■□□□□ 0.53
LINC01278-206ENST00000610088 NMRK2Q9NPI5 230 aa18.36■□□□□ 0.53
LINC01278-206ENST00000610088 CABP1Q9NZU7 370 aa18.36■□□□□ 0.53
LINC01278-206ENST00000610088 C16orf71Q8IYS4 520 aaPredicted RBP18.35■□□□□ 0.53
LINC01278-206ENST00000610088 DDX54Q8TDD1 881 aaKnown RBP18.35■□□□□ 0.53
LINC01278-206ENST00000610088 CCNL1Q9UK58 526 aaPredicted RBP18.35■□□□□ 0.53
LINC01278-206ENST00000610088 EVC2Q86UK5 1308 aa18.34■□□□□ 0.53
LINC01278-206ENST00000610088 PRIM1P49642 420 aaKnown RBP18.32■□□□□ 0.52
LINC01278-206ENST00000610088 RBM46Q8TBY0 533 aaKnown RBP18.32■□□□□ 0.52
LINC01278-206ENST00000610088 PIK3C2AO00443 1686 aa18.31■□□□□ 0.52
LINC01278-206ENST00000610088 HSPA1AP0DMV8 641 aaKnown RBP18.3■□□□□ 0.52
LINC01278-206ENST00000610088 HSPA1BP0DMV9 641 aaKnown RBP18.3■□□□□ 0.52
LINC01278-206ENST00000610088 CARD11Q9BXL7 1154 aa18.28■□□□□ 0.52
LINC01278-206ENST00000610088 ERBB3P21860 1342 aa18.27■□□□□ 0.52
LINC01278-206ENST00000610088 FSTL1Q12841 308 aa18.27■□□□□ 0.52
LINC01278-206ENST00000610088 TTC21BQ7Z4L5 1316 aa18.26■□□□□ 0.51
LINC01278-206ENST00000610088 ANKRD24Q8TF21 1146 aa18.25■□□□□ 0.51
LINC01278-206ENST00000610088 FLAD1Q8NFF5 587 aa18.24■□□□□ 0.51
LINC01278-206ENST00000610088 PCDH10Q9P2E7 1040 aa18.24■□□□□ 0.51
LINC01278-206ENST00000610088 ANKRD36BQ8N2N9 1353 aa18.24■□□□□ 0.51
LINC01278-206ENST00000610088 NFAT5O94916 1531 aa18.23■□□□□ 0.51
LINC01278-206ENST00000610088 ARHGAP27Q6ZUM4 889 aa18.23■□□□□ 0.51
LINC01278-206ENST00000610088 NSD2O96028 1365 aa18.22■□□□□ 0.51
LINC01278-206ENST00000610088 USP47Q96K76 1375 aa18.22■□□□□ 0.51
LINC01278-206ENST00000610088 LY75O60449 1722 aa18.22■□□□□ 0.51
LINC01278-206ENST00000610088 BCS1LQ9Y276 419 aa18.21■□□□□ 0.51
LINC01278-206ENST00000610088 PHF14O94880 888 aa18.2■□□□□ 0.5
LINC01278-206ENST00000610088 ZNF692Q9BU19 519 aaPredicted RBP18.2■□□□□ 0.5
LINC01278-206ENST00000610088 CICQ96RK0 1608 aaPredicted RBP18.2■□□□□ 0.5
LINC01278-206ENST00000610088 TTC21AQ8NDW8 1320 aa18.19■□□□□ 0.5
LINC01278-206ENST00000610088 MON2Q7Z3U7 1717 aa18.18■□□□□ 0.5
LINC01278-206ENST00000610088 SMIM5Q71RC9 77 aa18.18■□□□□ 0.5
LINC01278-206ENST00000610088 DOT1LQ8TEK3 1739 aa18.18■□□□□ 0.5
LINC01278-206ENST00000610088 SBNO2Q9Y2G9 1366 aa18.17■□□□□ 0.5
LINC01278-206ENST00000610088 C9orf131Q5VYM1 1079 aa18.17■□□□□ 0.5
LINC01278-206ENST00000610088 TMC1Q8TDI8 760 aa18.17■□□□□ 0.5
LINC01278-206ENST00000610088 LTV1Q96GA3 475 aaPredicted RBP18.17■□□□□ 0.5
LINC01278-206ENST00000610088 AK7Q96M32 723 aa18.17■□□□□ 0.5
LINC01278-206ENST00000610088 RRAGCQ9HB90 399 aa18.17■□□□□ 0.5
LINC01278-206ENST00000610088 KTN1Q86UP2 1357 aaKnown RBP18.17■□□□□ 0.5
LINC01278-206ENST00000610088 SMC1BQ8NDV3 1235 aa18.16■□□□□ 0.5
LINC01278-206ENST00000610088 PCGF6Q9BYE7 350 aa18.16■□□□□ 0.5
LINC01278-206ENST00000610088 AMIGO3Q86WK7 504 aa18.15■□□□□ 0.5
LINC01278-206ENST00000610088 KDM2BQ8NHM5 1336 aa18.15■□□□□ 0.5
LINC01278-206ENST00000610088 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.14■□□□□ 0.49
LINC01278-206ENST00000610088 KCPQ6ZWJ8 1503 aa18.13■□□□□ 0.49
LINC01278-206ENST00000610088 C5P01031 1676 aa18.13■□□□□ 0.49
LINC01278-206ENST00000610088 A0A0G2JLW4 131 aa18.13■□□□□ 0.49
LINC01278-206ENST00000610088 SLC24A1O60721 1099 aa18.13■□□□□ 0.49
LINC01278-206ENST00000610088 HDGFL2Q7Z4V5 671 aaPredicted RBP18.13■□□□□ 0.49
LINC01278-206ENST00000610088 ZCRB1Q8TBF4 217 aaKnown RBP18.13■□□□□ 0.49
LINC01278-206ENST00000610088 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.12■□□□□ 0.49
LINC01278-206ENST00000610088 FCHSD2O94868 740 aa18.12■□□□□ 0.49
LINC01278-206ENST00000610088 HMGB2P26583 209 aaKnown RBP18.12■□□□□ 0.49
LINC01278-206ENST00000610088 FAM161AQ3B820 660 aa18.12■□□□□ 0.49
LINC01278-206ENST00000610088 PXDNLA1KZ92 1463 aa18.12■□□□□ 0.49
LINC01278-206ENST00000610088 PLEKHG2Q9H7P9 1386 aa18.11■□□□□ 0.49
LINC01278-206ENST00000610088 TERF2IPQ9NYB0 399 aa18.1■□□□□ 0.49
LINC01278-206ENST00000610088 USP54Q70EL1 1684 aa18.09■□□□□ 0.49
LINC01278-206ENST00000610088 PALLDQ8WX93 1383 aa18.09■□□□□ 0.49
LINC01278-206ENST00000610088 ST20-MTHFSA0A0A6YYL1 179 aa18.09■□□□□ 0.49
LINC01278-206ENST00000610088 MMP10P09238 476 aa18.08■□□□□ 0.48
LINC01278-206ENST00000610088 TGFB2P61812 414 aa18.08■□□□□ 0.48
LINC01278-206ENST00000610088 NME9Q86XW9 330 aa18.08■□□□□ 0.48
LINC01278-206ENST00000610088 RNF181Q9P0P0 153 aa18.08■□□□□ 0.48
LINC01278-206ENST00000610088 LTN1O94822 1766 aa18.08■□□□□ 0.48
LINC01278-206ENST00000610088 DPEP1P16444 411 aa18.06■□□□□ 0.48
LINC01278-206ENST00000610088 MPRIPQ6WCQ1 1025 aa18.06■□□□□ 0.48
LINC01278-206ENST00000610088 PUS7Q96PZ0 661 aaKnown RBP18.06■□□□□ 0.48
LINC01278-206ENST00000610088 SLC12A5Q9H2X9 1139 aa18.06■□□□□ 0.48
LINC01278-206ENST00000610088 N4BP2Q86UW6 1770 aaPredicted RBP18.06■□□□□ 0.48
LINC01278-206ENST00000610088 CLSPNQ9HAW4 1339 aa18.05■□□□□ 0.48
LINC01278-206ENST00000610088 C4BP0C0L5 1744 aa18.05■□□□□ 0.48
LINC01278-206ENST00000610088 C10orf71Q711Q0 1435 aa18.05■□□□□ 0.48
LINC01278-206ENST00000610088 USP31Q70CQ4 1352 aa18.04■□□□□ 0.48
LINC01278-206ENST00000610088 SSFA2P28290 1259 aa18.04■□□□□ 0.48
LINC01278-206ENST00000610088 IP6K1Q92551 441 aa18.04■□□□□ 0.48
LINC01278-206ENST00000610088 TIMELESSQ9UNS1 1208 aa18.04■□□□□ 0.48
LINC01278-206ENST00000610088 NSD3Q9BZ95 1437 aa18.04■□□□□ 0.48
LINC01278-206ENST00000610088 FOXN1O15353 648 aa18.03■□□□□ 0.48
LINC01278-206ENST00000610088 TMF1P82094 1093 aa18.03■□□□□ 0.48
LINC01278-206ENST00000610088 EDC4Q6P2E9 1401 aaKnown RBP18.03■□□□□ 0.48
LINC01278-206ENST00000610088 TOGARAM1Q9Y4F4 1720 aa18.03■□□□□ 0.48
LINC01278-206ENST00000610088 TAF1LQ8IZX4 1826 aa18.02■□□□□ 0.48
LINC01278-206ENST00000610088 CCER1Q8TC90 406 aaPredicted RBP18.02■□□□□ 0.48
LINC01278-206ENST00000610088 MEGF6O75095 1541 aa18.02■□□□□ 0.47
LINC01278-206ENST00000610088 CD163L1Q9NR16 1453 aa18.01■□□□□ 0.47
LINC01278-206ENST00000610088 MKRN1Q9UHC7 482 aaKnown RBP18.01■□□□□ 0.47
LINC01278-206ENST00000610088 A0A1W2PP64 1363 aa18.01■□□□□ 0.47
LINC01278-206ENST00000610088 GNPATO15228 680 aa18■□□□□ 0.47
LINC01278-206ENST00000610088 CDCA8Q53HL2 280 aa18■□□□□ 0.47
LINC01278-206ENST00000610088 SMARCC1Q92922 1105 aaPredicted RBP18■□□□□ 0.47
LINC01278-206ENST00000610088 TESK2Q96S53 571 aa18■□□□□ 0.47
LINC01278-206ENST00000610088 PRDM10Q9NQV6 1147 aa18■□□□□ 0.47
LINC01278-206ENST00000610088 UBR3Q6ZT12 1888 aa18■□□□□ 0.47
LINC01278-206ENST00000610088 PKD1L3Q7Z443 1732 aa18■□□□□ 0.47
LINC01278-206ENST00000610088 KIAA1551Q9HCM1 1747 aa17.99■□□□□ 0.47
LINC01278-206ENST00000610088 LINC00116Q8NCU8 138 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms