RNA–Protein interactions for RNA: ENST00000608669.1

LINC00963-212, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 531 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-212ENST00000608669 SBF2Q86WG5 1849 aa16.45■□□□□ 0.22
LINC00963-212ENST00000608669 TATP17735 454 aaPredicted RBP16.44■□□□□ 0.22
LINC00963-212ENST00000608669 UPF1Q92900 1129 aaKnown RBP eCLIP16.44■□□□□ 0.221e-6■■■□□ 15.7
LINC00963-212ENST00000608669 ACSBG1Q96GR2 724 aa16.44■□□□□ 0.22
LINC00963-212ENST00000608669 PRKRIP1Q9H875 184 aaPredicted RBP16.44■□□□□ 0.22
LINC00963-212ENST00000608669 TOGARAM1Q9Y4F4 1720 aa16.44■□□□□ 0.22
LINC00963-212ENST00000608669 EXOC5O00471 708 aa16.43■□□□□ 0.22
LINC00963-212ENST00000608669 SOCS7O14512 581 aa16.43■□□□□ 0.22
LINC00963-212ENST00000608669 CCDC184Q52MB2 194 aa16.43■□□□□ 0.22
LINC00963-212ENST00000608669 TRIM37O94972 964 aa16.42■□□□□ 0.22
LINC00963-212ENST00000608669 MYBBP1AQ9BQG0 1328 aaKnown RBP16.42■□□□□ 0.22
LINC00963-212ENST00000608669 RALBP1Q15311 655 aa16.41■□□□□ 0.22
LINC00963-212ENST00000608669 ZCRB1Q8TBF4 217 aaKnown RBP16.41■□□□□ 0.22
LINC00963-212ENST00000608669 CFAP53Q96M91 514 aa16.41■□□□□ 0.22
LINC00963-212ENST00000608669 CDCA7Q9BWT1 371 aaPredicted RBP16.4■□□□□ 0.22
LINC00963-212ENST00000608669 KCNQ2O43526 872 aa16.39■□□□□ 0.21
LINC00963-212ENST00000608669 DEFB132Q7Z7B7 95 aa16.39■□□□□ 0.21
LINC00963-212ENST00000608669 NHSQ6T4R5 1651 aa16.39■□□□□ 0.21
LINC00963-212ENST00000608669 KAT6BQ8WYB5 2073 aa16.39■□□□□ 0.21
LINC00963-212ENST00000608669 SENP3-EIF4A1A0A087X0R7 540 aa16.38■□□□□ 0.21
LINC00963-212ENST00000608669 CYP27B1O15528 508 aa16.38■□□□□ 0.21
LINC00963-212ENST00000608669 U2AF1L5P0DN76 240 aaPredicted RBP16.38■□□□□ 0.21
LINC00963-212ENST00000608669 U2AF1Q01081 240 aaKnown RBP eCLIP16.38■□□□□ 0.21
LINC00963-212ENST00000608669 KDRP35968 1356 aa16.38■□□□□ 0.21
LINC00963-212ENST00000608669 SYTL4Q96C24 671 aaPredicted RBP16.37■□□□□ 0.21
LINC00963-212ENST00000608669 VIRMAQ69YN4 1812 aaKnown RBP16.37■□□□□ 0.21
LINC00963-212ENST00000608669 BTAF1O14981 1849 aa16.36■□□□□ 0.21
LINC00963-212ENST00000608669 ANP32CO43423 234 aa16.36■□□□□ 0.21
LINC00963-212ENST00000608669 FAM196AQ6ZSG2 479 aa16.36■□□□□ 0.21
LINC00963-212ENST00000608669 PCDH11XQ9BZA7 1347 aa16.36■□□□□ 0.21
LINC00963-212ENST00000608669 PCDH11YQ9BZA8 1340 aa16.36■□□□□ 0.21
LINC00963-212ENST00000608669 PRKAR2BP31323 418 aa16.35■□□□□ 0.21
LINC00963-212ENST00000608669 ZNF530Q6P9A1 599 aaPredicted RBP16.35■□□□□ 0.21
LINC00963-212ENST00000608669 ITGB4P16144 1822 aa16.35■□□□□ 0.21
LINC00963-212ENST00000608669 RSPH6AQ9H0K4 717 aa16.34■□□□□ 0.21
LINC00963-212ENST00000608669 EN1Q05925 392 aaPredicted RBP16.33■□□□□ 0.2
LINC00963-212ENST00000608669 CCDC146Q8IYE0 955 aa16.33■□□□□ 0.2
LINC00963-212ENST00000608669 PHACTR3Q96KR7 559 aa16.33■□□□□ 0.2
LINC00963-212ENST00000608669 SPG7Q9UQ90 795 aa16.33■□□□□ 0.2
LINC00963-212ENST00000608669 KDM6AO15550 1401 aaPredicted RBP16.33■□□□□ 0.2
LINC00963-212ENST00000608669 PHKG2P15735 406 aa16.32■□□□□ 0.2
LINC00963-212ENST00000608669 MTHFSDQ2M296 383 aaKnown RBP16.32■□□□□ 0.2
LINC00963-212ENST00000608669 NUDCQ9Y266 331 aa16.32■□□□□ 0.2
LINC00963-212ENST00000608669 APBA3O96018 575 aa16.31■□□□□ 0.2
LINC00963-212ENST00000608669 PRIM1P49642 420 aaKnown RBP16.31■□□□□ 0.2
LINC00963-212ENST00000608669 SF3B2Q13435 895 aaKnown RBP16.3■□□□□ 0.2
LINC00963-212ENST00000608669 PLEKHO1Q53GL0 409 aaPredicted RBP16.3■□□□□ 0.2
LINC00963-212ENST00000608669 MPRIPQ6WCQ1 1025 aa16.3■□□□□ 0.2
LINC00963-212ENST00000608669 DLG5Q8TDM6 1919 aa16.29■□□□□ 0.2
LINC00963-212ENST00000608669 SCN11AQ9UI33 1791 aa16.29■□□□□ 0.2
LINC00963-212ENST00000608669 KCNQ4P56696 695 aa16.29■□□□□ 0.2
LINC00963-212ENST00000608669 EZH2Q15910 746 aaKnown RBP16.29■□□□□ 0.2
LINC00963-212ENST00000608669 IFNL2Q8IZJ0 200 aa16.28■□□□□ 0.2
LINC00963-212ENST00000608669 MRS2Q9HD23 443 aa16.28■□□□□ 0.2
LINC00963-212ENST00000608669 NUP188Q5SRE5 1749 aa16.28■□□□□ 0.2
LINC00963-212ENST00000608669 RREB1Q92766 1687 aa16.27■□□□□ 0.2
LINC00963-212ENST00000608669 C1orf141Q5JVX7 400 aa16.27■□□□□ 0.2
LINC00963-212ENST00000608669 LGR6Q9HBX8 967 aa16.27■□□□□ 0.2
LINC00963-212ENST00000608669 WDR43Q15061 677 aaKnown RBP eCLIP16.26■□□□□ 0.19
LINC00963-212ENST00000608669 DIEXFQ68CQ4 756 aaKnown RBP16.26■□□□□ 0.19
LINC00963-212ENST00000608669 BCL11BQ9C0K0 894 aaPredicted RBP16.26■□□□□ 0.19
LINC00963-212ENST00000608669 ADAMTS8Q9UP79 889 aa16.26■□□□□ 0.19
LINC00963-212ENST00000608669 RRP7AQ9Y3A4 280 aaKnown RBP16.26■□□□□ 0.19
LINC00963-212ENST00000608669 BCL9O00512 1426 aa16.26■□□□□ 0.19
LINC00963-212ENST00000608669 BAG6P46379 1132 aa16.25■□□□□ 0.19
LINC00963-212ENST00000608669 DCTN1Q14203 1278 aa16.25■□□□□ 0.19
LINC00963-212ENST00000608669 AMOTQ4VCS5 1084 aa16.25■□□□□ 0.19
LINC00963-212ENST00000608669 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.25■□□□□ 0.19
LINC00963-212ENST00000608669 PLEKHF1Q96S99 279 aa16.24■□□□□ 0.19
LINC00963-212ENST00000608669 MAP3K5Q99683 1374 aa16.24■□□□□ 0.19
LINC00963-212ENST00000608669 PIGBQ92521 554 aa16.23■□□□□ 0.19
LINC00963-212ENST00000608669 THUMPD2Q9BTF0 503 aaKnown RBP16.23■□□□□ 0.19
LINC00963-212ENST00000608669 ADAMTS7Q9UKP4 1686 aa16.22■□□□□ 0.19
LINC00963-212ENST00000608669 FCHSD2O94868 740 aa16.22■□□□□ 0.19
LINC00963-212ENST00000608669 NKX1-1Q15270 411 aaPredicted RBP16.22■□□□□ 0.19
LINC00963-212ENST00000608669 NEUROD2Q15784 382 aa16.22■□□□□ 0.19
LINC00963-212ENST00000608669 AKAP4Q5JQC9 854 aa16.22■□□□□ 0.19
LINC00963-212ENST00000608669 MCM10Q7L590 875 aa16.22■□□□□ 0.19
LINC00963-212ENST00000608669 CAMKK2Q96RR4 588 aa16.22■□□□□ 0.19
LINC00963-212ENST00000608669 LY75O60449 1722 aa16.22■□□□□ 0.19
LINC00963-212ENST00000608669 MAPK8IP3Q9UPT6 1336 aa16.21■□□□□ 0.19
LINC00963-212ENST00000608669 RGPD3A6NKT7 1758 aaPredicted RBP16.21■□□□□ 0.19
LINC00963-212ENST00000608669 RGPD4Q7Z3J3 1758 aa16.21■□□□□ 0.19
LINC00963-212ENST00000608669 RNMTO43148 476 aaKnown RBP16.21■□□□□ 0.19
LINC00963-212ENST00000608669 MIER1Q8N108 512 aa16.21■□□□□ 0.19
LINC00963-212ENST00000608669 TMOD3Q9NYL9 352 aa16.21■□□□□ 0.19
LINC00963-212ENST00000608669 SIPA1L3O60292 1781 aaPredicted RBP16.21■□□□□ 0.18
LINC00963-212ENST00000608669 CABP4P57796 275 aa16.2■□□□□ 0.18
LINC00963-212ENST00000608669 FAM9BQ8IZU0 186 aa16.2■□□□□ 0.18
LINC00963-212ENST00000608669 PROM2Q8N271 834 aa16.2■□□□□ 0.18
LINC00963-212ENST00000608669 GAS2L2Q8NHY3 880 aa16.2■□□□□ 0.18
LINC00963-212ENST00000608669 DCAF5Q96JK2 942 aa16.2■□□□□ 0.18
LINC00963-212ENST00000608669 ASAP1Q9ULH1 1129 aa16.2■□□□□ 0.18
LINC00963-212ENST00000608669 PAPPAQ13219 1627 aa16.19■□□□□ 0.18
LINC00963-212ENST00000608669 MRC1P22897 1456 aa16.19■□□□□ 0.18
LINC00963-212ENST00000608669 PALLDQ8WX93 1383 aa16.19■□□□□ 0.18
LINC00963-212ENST00000608669 PSDA5PKW4 1024 aaPredicted RBP16.19■□□□□ 0.18
LINC00963-212ENST00000608669 SLC39A6Q13433 755 aa16.19■□□□□ 0.18
LINC00963-212ENST00000608669 CCDC125Q86Z20 511 aa16.19■□□□□ 0.18
LINC00963-212ENST00000608669 NFATC2IPQ8NCF5 419 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms