RNA–Protein interactions for RNA: ENST00000608624.5

LINC00343-212, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 774 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-212ENST00000608624 POLKQ9UBT6 870 aa12.34□□□□□ -0.43
LINC00343-212ENST00000608624 HSP90AB2PQ58FF8 381 aa12.33□□□□□ -0.44
LINC00343-212ENST00000608624 PARD3Q8TEW0 1356 aa12.32□□□□□ -0.44
LINC00343-212ENST00000608624 PPM1GO15355 546 aaPredicted RBP12.32□□□□□ -0.44
LINC00343-212ENST00000608624 LTV1Q96GA3 475 aaPredicted RBP12.32□□□□□ -0.44
LINC00343-212ENST00000608624 FAM208AQ9UK61 1670 aaKnown RBP12.32□□□□□ -0.44
LINC00343-212ENST00000608624 RTL1A6NKG5 1358 aa12.31□□□□□ -0.44
LINC00343-212ENST00000608624 RGS12O14924 1447 aa12.31□□□□□ -0.44
LINC00343-212ENST00000608624 AMPHP49418 695 aa12.31□□□□□ -0.44
LINC00343-212ENST00000608624 CDAN1Q8IWY9 1227 aa12.31□□□□□ -0.44
LINC00343-212ENST00000608624 IP6K1Q92551 441 aa12.31□□□□□ -0.44
LINC00343-212ENST00000608624 QTRT2Q9H974 415 aaKnown RBP12.31□□□□□ -0.44
LINC00343-212ENST00000608624 COL3A1P02461 1466 aaPredicted RBP12.31□□□□□ -0.44
LINC00343-212ENST00000608624 CDK12Q9NYV4 1490 aaPredicted RBP12.31□□□□□ -0.44
LINC00343-212ENST00000608624 ERBB3P21860 1342 aa12.31□□□□□ -0.44
LINC00343-212ENST00000608624 FLT4P35916 1363 aa12.3□□□□□ -0.44
LINC00343-212ENST00000608624 WNK3Q9BYP7 1800 aa12.3□□□□□ -0.44
LINC00343-212ENST00000608624 VPS72Q15906 364 aa12.3□□□□□ -0.44
LINC00343-212ENST00000608624 ILDR2Q71H61 639 aa12.3□□□□□ -0.44
LINC00343-212ENST00000608624 ANKRD24Q8TF21 1146 aa12.3□□□□□ -0.44
LINC00343-212ENST00000608624 SPATA31A5Q5VU36 1347 aa12.3□□□□□ -0.44
LINC00343-212ENST00000608624 SPATA31A7Q8IWB4 1347 aa12.3□□□□□ -0.44
LINC00343-212ENST00000608624 BLMP54132 1417 aaPredicted RBP12.29□□□□□ -0.44
LINC00343-212ENST00000608624 THSD7AQ9UPZ6 1657 aa12.29□□□□□ -0.44
LINC00343-212ENST00000608624 ZNF772Q68DY9 489 aaPredicted RBP12.29□□□□□ -0.44
LINC00343-212ENST00000608624 USHBP1Q8N6Y0 703 aa12.29□□□□□ -0.44
LINC00343-212ENST00000608624 USP35Q9P2H5 1018 aa12.29□□□□□ -0.44
LINC00343-212ENST00000608624 CCDC9Q9Y3X0 531 aaKnown RBP12.29□□□□□ -0.44
LINC00343-212ENST00000608624 SPATA31A1Q5TZJ5 1347 aa12.29□□□□□ -0.44
LINC00343-212ENST00000608624 WDR17Q8IZU2 1322 aa12.29□□□□□ -0.44
LINC00343-212ENST00000608624 PPP2R1AP30153 589 aa12.28□□□□□ -0.44
LINC00343-212ENST00000608624 TRPC5Q9UL62 973 aaPredicted RBP12.28□□□□□ -0.44
LINC00343-212ENST00000608624 INSRP06213 1382 aa12.28□□□□□ -0.44
LINC00343-212ENST00000608624 EP400Q96L91 3159 aa12.28□□□□□ -0.44
LINC00343-212ENST00000608624 CRB1P82279 1406 aa12.28□□□□□ -0.44
LINC00343-212ENST00000608624 BRWD3Q6RI45 1802 aa12.27□□□□□ -0.44
LINC00343-212ENST00000608624 MTHFSP49914 203 aa12.27□□□□□ -0.45
LINC00343-212ENST00000608624 EIF4A2Q14240 407 aaKnown RBP12.27□□□□□ -0.45
LINC00343-212ENST00000608624 GJD4Q96KN9 370 aaPredicted RBP12.27□□□□□ -0.45
LINC00343-212ENST00000608624 RGPD1P0DJD0 1748 aa12.27□□□□□ -0.45
LINC00343-212ENST00000608624 LRRC37A3O60309 1634 aa12.26□□□□□ -0.45
LINC00343-212ENST00000608624 CSB-PGBD3P0DP91 1061 aa12.26□□□□□ -0.45
LINC00343-212ENST00000608624 EVA1CP58658 441 aa12.26□□□□□ -0.45
LINC00343-212ENST00000608624 FAM98CQ17RN3 349 aaKnown RBP12.26□□□□□ -0.45
LINC00343-212ENST00000608624 NLRP2Q9NX02 1062 aa12.26□□□□□ -0.45
LINC00343-212ENST00000608624 DISP2A7MBM2 1401 aa12.26□□□□□ -0.45
LINC00343-212ENST00000608624 MEGF6O75095 1541 aa12.26□□□□□ -0.45
LINC00343-212ENST00000608624 NBPF6Q5VWK0 638 aa12.25□□□□□ -0.45
LINC00343-212ENST00000608624 TOM1L2Q6ZVM7 507 aa12.25□□□□□ -0.45
LINC00343-212ENST00000608624 NBPF4Q96M43 638 aa12.25□□□□□ -0.45
LINC00343-212ENST00000608624 KIF24Q5T7B8 1368 aa12.25□□□□□ -0.45
LINC00343-212ENST00000608624 RXRBP28702 533 aa12.24□□□□□ -0.45
LINC00343-212ENST00000608624 RBM6P78332 1123 aaKnown RBP12.24□□□□□ -0.45
LINC00343-212ENST00000608624 NCAPD2Q15021 1401 aa12.24□□□□□ -0.45
LINC00343-212ENST00000608624 PRKRIP1Q9H875 184 aaPredicted RBP12.24□□□□□ -0.45
LINC00343-212ENST00000608624 SHANK3Q9BYB0 1731 aa12.23□□□□□ -0.45
LINC00343-212ENST00000608624 CCDC184Q52MB2 194 aa12.23□□□□□ -0.45
LINC00343-212ENST00000608624 AEBP1Q8IUX7 1158 aa12.23□□□□□ -0.45
LINC00343-212ENST00000608624 EYA1Q99502 592 aa12.23□□□□□ -0.45
LINC00343-212ENST00000608624 CARD10Q9BWT7 1032 aa12.23□□□□□ -0.45
LINC00343-212ENST00000608624 PARP4Q9UKK3 1724 aaKnown RBP12.23□□□□□ -0.45
LINC00343-212ENST00000608624 IL13P35225 146 aa12.22□□□□□ -0.45
LINC00343-212ENST00000608624 SEPT12Q8IYM1 358 aa12.22□□□□□ -0.45
LINC00343-212ENST00000608624 TCP11L2Q8N4U5 519 aa12.22□□□□□ -0.45
LINC00343-212ENST00000608624 BMP2KQ9NSY1 1161 aaPredicted RBP12.22□□□□□ -0.45
LINC00343-212ENST00000608624 TRPC6Q9Y210 931 aa12.22□□□□□ -0.45
LINC00343-212ENST00000608624 FAM182BQ5T319 152 aa12.21□□□□□ -0.45
LINC00343-212ENST00000608624 IGSF1Q8N6C5 1336 aa12.2□□□□□ -0.46
LINC00343-212ENST00000608624 A0A0G2JS52 829 aa12.2□□□□□ -0.46
LINC00343-212ENST00000608624 MYT1Q01538 1121 aa12.2□□□□□ -0.46
LINC00343-212ENST00000608624 MYBBP1AQ9BQG0 1328 aaKnown RBP12.19□□□□□ -0.46
LINC00343-212ENST00000608624 ONECUT3O60422 494 aaPredicted RBP12.19□□□□□ -0.46
LINC00343-212ENST00000608624 RALBP1Q15311 655 aa12.19□□□□□ -0.46
LINC00343-212ENST00000608624 BARGINQ6ZT62 677 aa12.19□□□□□ -0.46
LINC00343-212ENST00000608624 OVOS2A0A0G2JMS6 1433 aa12.19□□□□□ -0.46
LINC00343-212ENST00000608624 TNS2Q63HR2 1409 aa12.19□□□□□ -0.46
LINC00343-212ENST00000608624 PKD1L3Q7Z443 1732 aa12.18□□□□□ -0.46
LINC00343-212ENST00000608624 KIF12Q96FN5 646 aa12.18□□□□□ -0.46
LINC00343-212ENST00000608624 SPDYE4A6NLX3 237 aa12.17□□□□□ -0.46
LINC00343-212ENST00000608624 HMOX1P09601 288 aa12.17□□□□□ -0.46
LINC00343-212ENST00000608624 TSPYL2Q9H2G4 693 aaPredicted RBP12.17□□□□□ -0.46
LINC00343-212ENST00000608624 COLQQ9Y215 455 aaPredicted RBP12.17□□□□□ -0.46
LINC00343-212ENST00000608624 DIAPH1O60610 1272 aaKnown RBP12.16□□□□□ -0.46
LINC00343-212ENST00000608624 IL2RBP14784 551 aa12.16□□□□□ -0.46
LINC00343-212ENST00000608624 THRAP3Q9Y2W1 955 aaKnown RBP12.16□□□□□ -0.46
LINC00343-212ENST00000608624 KDRP35968 1356 aa12.16□□□□□ -0.46
LINC00343-212ENST00000608624 U2SURPO15042 1029 aaKnown RBP12.15□□□□□ -0.46
LINC00343-212ENST00000608624 SULT6B1Q6IMI4 303 aa12.15□□□□□ -0.46
LINC00343-212ENST00000608624 MARCH10Q8NA82 808 aaPredicted RBP12.15□□□□□ -0.46
LINC00343-212ENST00000608624 TOGARAM1Q9Y4F4 1720 aa12.14□□□□□ -0.47
LINC00343-212ENST00000608624 PTF1AQ7RTS3 328 aa12.14□□□□□ -0.47
LINC00343-212ENST00000608624 ANP32CO43423 234 aa12.13□□□□□ -0.47
LINC00343-212ENST00000608624 KRT27Q7Z3Y8 459 aa12.13□□□□□ -0.47
LINC00343-212ENST00000608624 CFAP53Q96M91 514 aa12.13□□□□□ -0.47
LINC00343-212ENST00000608624 DOT1LQ8TEK3 1739 aa12.12□□□□□ -0.47
LINC00343-212ENST00000608624 CYP27B1O15528 508 aa12.12□□□□□ -0.47
LINC00343-212ENST00000608624 DDB1Q16531 1140 aa12.12□□□□□ -0.47
LINC00343-212ENST00000608624 DIEXFQ68CQ4 756 aaKnown RBP12.12□□□□□ -0.47
LINC00343-212ENST00000608624 RSPH6AQ9H0K4 717 aa12.12□□□□□ -0.47
LINC00343-212ENST00000608624 U2AF1L5P0DN76 240 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 424 ms