RNA–Protein interactions for RNA: ENST00000608254.1

PTCHD1-AS-202, Transcript of PTCHD1 antisense RNA (head to head), humanhuman

TSL 4 BASIC

Gene PTCHD1-AS, Length 557 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-AS-202ENST00000608254 RGPD1P0DJD0 1748 aa16■□□□□ 0.15
PTCHD1-AS-202ENST00000608254 AMOTQ4VCS5 1084 aa16■□□□□ 0.15
PTCHD1-AS-202ENST00000608254 ILDR2Q71H61 639 aa16■□□□□ 0.15
PTCHD1-AS-202ENST00000608254 SPG7Q9UQ90 795 aa16■□□□□ 0.15
PTCHD1-AS-202ENST00000608254 TNS2Q63HR2 1409 aa16■□□□□ 0.15
PTCHD1-AS-202ENST00000608254 WDR43Q15061 677 aaKnown RBP eCLIP15.99■□□□□ 0.15
PTCHD1-AS-202ENST00000608254 PLEKHO1Q53GL0 409 aaPredicted RBP15.99■□□□□ 0.15
PTCHD1-AS-202ENST00000608254 RSPH6AQ9H0K4 717 aa15.99■□□□□ 0.15
PTCHD1-AS-202ENST00000608254 MRS2Q9HD23 443 aa15.99■□□□□ 0.15
PTCHD1-AS-202ENST00000608254 CCDC184Q52MB2 194 aa15.98■□□□□ 0.15
PTCHD1-AS-202ENST00000608254 MARCH10Q8NA82 808 aaPredicted RBP15.98■□□□□ 0.15
PTCHD1-AS-202ENST00000608254 PNNQ9H307 717 aaKnown RBP15.98■□□□□ 0.15
PTCHD1-AS-202ENST00000608254 RGPD2P0DJD1 1756 aa15.98■□□□□ 0.15
PTCHD1-AS-202ENST00000608254 PARP4Q9UKK3 1724 aaKnown RBP15.97■□□□□ 0.15
PTCHD1-AS-202ENST00000608254 DDX54Q8TDD1 881 aaKnown RBP15.97■□□□□ 0.15
PTCHD1-AS-202ENST00000608254 PCDH11XQ9BZA7 1347 aa15.96■□□□□ 0.15
PTCHD1-AS-202ENST00000608254 PCDH11YQ9BZA8 1340 aa15.96■□□□□ 0.15
PTCHD1-AS-202ENST00000608254 CCER2I3L3R5 266 aa15.96■□□□□ 0.15
PTCHD1-AS-202ENST00000608254 PRKAR2BP31323 418 aa15.96■□□□□ 0.15
PTCHD1-AS-202ENST00000608254 LRRC37A3O60309 1634 aa15.95■□□□□ 0.14
PTCHD1-AS-202ENST00000608254 FAM196AQ6ZSG2 479 aa15.95■□□□□ 0.14
PTCHD1-AS-202ENST00000608254 PNISRQ8TF01 805 aaKnown RBP15.95■□□□□ 0.14
PTCHD1-AS-202ENST00000608254 CYP27B1O15528 508 aa15.94■□□□□ 0.14
PTCHD1-AS-202ENST00000608254 IFNL2Q8IZJ0 200 aa15.94■□□□□ 0.14
PTCHD1-AS-202ENST00000608254 ADAMTS8Q9UP79 889 aa15.94■□□□□ 0.14
PTCHD1-AS-202ENST00000608254 WNK3Q9BYP7 1800 aa15.94■□□□□ 0.14
PTCHD1-AS-202ENST00000608254 NEFMP07197 916 aa15.93■□□□□ 0.14
PTCHD1-AS-202ENST00000608254 PHKG2P15735 406 aa15.93■□□□□ 0.14
PTCHD1-AS-202ENST00000608254 FAM182BQ5T319 152 aa15.93■□□□□ 0.14
PTCHD1-AS-202ENST00000608254 ZNF530Q6P9A1 599 aaPredicted RBP15.93■□□□□ 0.14
PTCHD1-AS-202ENST00000608254 MIER1Q8N108 512 aa15.93■□□□□ 0.14
PTCHD1-AS-202ENST00000608254 PHACTR3Q96KR7 559 aa15.93■□□□□ 0.14
PTCHD1-AS-202ENST00000608254 PLEKHF1Q96S99 279 aa15.93■□□□□ 0.14
PTCHD1-AS-202ENST00000608254 BCL9O00512 1426 aa15.93■□□□□ 0.14
PTCHD1-AS-202ENST00000608254 NKX1-1Q15270 411 aaPredicted RBP15.92■□□□□ 0.14
PTCHD1-AS-202ENST00000608254 MTHFSDQ2M296 383 aaKnown RBP15.92■□□□□ 0.14
PTCHD1-AS-202ENST00000608254 GAS2L2Q8NHY3 880 aa15.92■□□□□ 0.14
PTCHD1-AS-202ENST00000608254 HSP90AB1P08238 724 aaKnown RBP15.91■□□□□ 0.14
PTCHD1-AS-202ENST00000608254 C1orf141Q5JVX7 400 aa15.91■□□□□ 0.14
PTCHD1-AS-202ENST00000608254 AKAP4Q5JQC9 854 aa15.9■□□□□ 0.14
PTCHD1-AS-202ENST00000608254 RUNDC1Q96C34 613 aa15.9■□□□□ 0.14
PTCHD1-AS-202ENST00000608254 MAPK8IP3Q9UPT6 1336 aa15.9■□□□□ 0.14
PTCHD1-AS-202ENST00000608254 PKD1L3Q7Z443 1732 aa15.89■□□□□ 0.13
PTCHD1-AS-202ENST00000608254 DCAF5Q96JK2 942 aa15.88■□□□□ 0.13
PTCHD1-AS-202ENST00000608254 BRWD3Q6RI45 1802 aa15.88■□□□□ 0.13
PTCHD1-AS-202ENST00000608254 CCDC125Q86Z20 511 aa15.87■□□□□ 0.13
PTCHD1-AS-202ENST00000608254 CCDC146Q8IYE0 955 aa15.87■□□□□ 0.13
PTCHD1-AS-202ENST00000608254 GNAT3A8MTJ3 354 aa15.86■□□□□ 0.13
PTCHD1-AS-202ENST00000608254 NFE2L2Q16236 605 aa15.86■□□□□ 0.13
PTCHD1-AS-202ENST00000608254 BCL11BQ9C0K0 894 aaPredicted RBP15.86■□□□□ 0.13
PTCHD1-AS-202ENST00000608254 ERVV-2B6SEH9 535 aa15.85■□□□□ 0.13
PTCHD1-AS-202ENST00000608254 HTATSF1O43719 755 aaKnown RBP15.85■□□□□ 0.13
PTCHD1-AS-202ENST00000608254 TRIM37O94972 964 aa15.85■□□□□ 0.13
PTCHD1-AS-202ENST00000608254 MPRIPQ6WCQ1 1025 aa15.85■□□□□ 0.13
PTCHD1-AS-202ENST00000608254 FAM9BQ8IZU0 186 aa15.85■□□□□ 0.13
PTCHD1-AS-202ENST00000608254 ACSBG1Q96GR2 724 aa15.85■□□□□ 0.13
PTCHD1-AS-202ENST00000608254 MAP3K5Q99683 1374 aa15.85■□□□□ 0.13
PTCHD1-AS-202ENST00000608254 PRIM1P49642 420 aaKnown RBP15.84■□□□□ 0.13
PTCHD1-AS-202ENST00000608254 UPF1Q92900 1129 aaKnown RBP eCLIP15.84■□□□□ 0.13
PTCHD1-AS-202ENST00000608254 SHANK3Q9BYB0 1731 aa15.84■□□□□ 0.13
PTCHD1-AS-202ENST00000608254 RNMTO43148 476 aaKnown RBP15.83■□□□□ 0.12
PTCHD1-AS-202ENST00000608254 KCNQ2O43526 872 aa15.83■□□□□ 0.12
PTCHD1-AS-202ENST00000608254 TMPOP42166 694 aaKnown RBP15.83■□□□□ 0.12
PTCHD1-AS-202ENST00000608254 RTF1Q92541 710 aaKnown RBP15.83■□□□□ 0.12
PTCHD1-AS-202ENST00000608254 RIPK4P57078 832 aa15.82■□□□□ 0.12
PTCHD1-AS-202ENST00000608254 SF3B2Q13435 895 aaKnown RBP15.82■□□□□ 0.12
PTCHD1-AS-202ENST00000608254 SYTL4Q96C24 671 aaPredicted RBP15.82■□□□□ 0.12
PTCHD1-AS-202ENST00000608254 LGR6Q9HBX8 967 aa15.82■□□□□ 0.12
PTCHD1-AS-202ENST00000608254 KDM6AO15550 1401 aaPredicted RBP15.82■□□□□ 0.12
PTCHD1-AS-202ENST00000608254 APAF1O14727 1248 aa15.81■□□□□ 0.12
PTCHD1-AS-202ENST00000608254 CABP4P57796 275 aa15.81■□□□□ 0.12
PTCHD1-AS-202ENST00000608254 IL17REQ8NFR9 667 aa15.81■□□□□ 0.12
PTCHD1-AS-202ENST00000608254 LMOD3Q0VAK6 560 aa15.8■□□□□ 0.12
PTCHD1-AS-202ENST00000608254 PTF1AQ7RTS3 328 aa15.8■□□□□ 0.12
PTCHD1-AS-202ENST00000608254 TMOD3Q9NYL9 352 aa15.8■□□□□ 0.12
PTCHD1-AS-202ENST00000608254 SOCS7O14512 581 aa15.79■□□□□ 0.12
PTCHD1-AS-202ENST00000608254 APBA3O96018 575 aa15.79■□□□□ 0.12
PTCHD1-AS-202ENST00000608254 PIGBQ92521 554 aa15.79■□□□□ 0.12
PTCHD1-AS-202ENST00000608254 SLC52A2Q9HAB3 445 aa15.79■□□□□ 0.12
PTCHD1-AS-202ENST00000608254 RRP7AQ9Y3A4 280 aaKnown RBP15.79■□□□□ 0.12
PTCHD1-AS-202ENST00000608254 EP400Q96L91 3159 aa15.79■□□□□ 0.12
PTCHD1-AS-202ENST00000608254 CEMIPQ8WUJ3 1361 aa15.78■□□□□ 0.12
PTCHD1-AS-202ENST00000608254 TEFQ10587 303 aa15.78■□□□□ 0.12
PTCHD1-AS-202ENST00000608254 NEUROD2Q15784 382 aa15.78■□□□□ 0.12
PTCHD1-AS-202ENST00000608254 NCBP3Q53F19 620 aaKnown RBP15.78■□□□□ 0.12
PTCHD1-AS-202ENST00000608254 MCM10Q7L590 875 aa15.78■□□□□ 0.12
PTCHD1-AS-202ENST00000608254 NFATC2IPQ8NCF5 419 aa15.78■□□□□ 0.12
PTCHD1-AS-202ENST00000608254 PLSCR1O15162 318 aa15.77■□□□□ 0.12
PTCHD1-AS-202ENST00000608254 BAG6P46379 1132 aa15.77■□□□□ 0.12
PTCHD1-AS-202ENST00000608254 DCTN1Q14203 1278 aa15.76■□□□□ 0.11
PTCHD1-AS-202ENST00000608254 TRIM35Q9UPQ4 493 aa15.76■□□□□ 0.11
PTCHD1-AS-202ENST00000608254 NHSQ6T4R5 1651 aa15.76■□□□□ 0.11
PTCHD1-AS-202ENST00000608254 NGEFQ8N5V2 710 aa15.75■□□□□ 0.11
PTCHD1-AS-202ENST00000608254 SMARCC1Q92922 1105 aaPredicted RBP15.75■□□□□ 0.11
PTCHD1-AS-202ENST00000608254 ADAMTS7Q9UKP4 1686 aa15.74■□□□□ 0.11
PTCHD1-AS-202ENST00000608254 MRC1P22897 1456 aa15.74■□□□□ 0.11
PTCHD1-AS-202ENST00000608254 CCDC27Q2M243 656 aa15.74■□□□□ 0.11
PTCHD1-AS-202ENST00000608254 ATG3Q9NT62 314 aa15.74■□□□□ 0.11
PTCHD1-AS-202ENST00000608254 DOT1LQ8TEK3 1739 aa15.74■□□□□ 0.11
PTCHD1-AS-202ENST00000608254 TOGARAM1Q9Y4F4 1720 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms