RNA–Protein interactions for RNA: ENST00000608223.6

LINC00854-213, Long intergenic non-protein coding RNA 854, humanhuman

APPRIS ALT2 TSL 5

Gene LINC00854, Length 391 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00854-213ENST00000608223 HSP90AB2PQ58FF8 381 aa19.74■□□□□ 0.75
LINC00854-213ENST00000608223 PRIM1P49642 420 aaKnown RBP19.73■□□□□ 0.75
LINC00854-213ENST00000608223 LRRC4BQ9NT99 713 aa19.73■□□□□ 0.75
LINC00854-213ENST00000608223 SMG6Q86US8 1419 aaKnown RBP19.73■□□□□ 0.75
LINC00854-213ENST00000608223 NSD3Q9BZ95 1437 aa19.73■□□□□ 0.75
LINC00854-213ENST00000608223 PTGER2P43116 358 aa19.72■□□□□ 0.75
LINC00854-213ENST00000608223 ZNF827Q17R98 1081 aa19.71■□□□□ 0.75
LINC00854-213ENST00000608223 RAPGEF4Q8WZA2 1011 aa19.71■□□□□ 0.75
LINC00854-213ENST00000608223 POLR3GLQ9BT43 218 aa19.71■□□□□ 0.75
LINC00854-213ENST00000608223 MAP2P11137 1827 aaKnown RBP19.71■□□□□ 0.75
LINC00854-213ENST00000608223 INSRP06213 1382 aa19.7■□□□□ 0.74
LINC00854-213ENST00000608223 FLT4P35916 1363 aa19.7■□□□□ 0.74
LINC00854-213ENST00000608223 DCAF8L1A6NGE4 600 aa19.7■□□□□ 0.74
LINC00854-213ENST00000608223 MTFR1LQ9H019 292 aa19.7■□□□□ 0.74
LINC00854-213ENST00000608223 KCNQ4P56696 695 aa19.69■□□□□ 0.74
LINC00854-213ENST00000608223 EMILIN1Q9Y6C2 1016 aa19.69■□□□□ 0.74
LINC00854-213ENST00000608223 LY75O60449 1722 aa19.68■□□□□ 0.74
LINC00854-213ENST00000608223 PPM1GO15355 546 aaPredicted RBP19.68■□□□□ 0.74
LINC00854-213ENST00000608223 TATP17735 454 aaPredicted RBP19.68■□□□□ 0.74
LINC00854-213ENST00000608223 SLC27A3Q5K4L6 730 aa19.68■□□□□ 0.74
LINC00854-213ENST00000608223 CGNL1Q0VF96 1302 aa19.68■□□□□ 0.74
LINC00854-213ENST00000608223 KIF24Q5T7B8 1368 aa19.68■□□□□ 0.74
LINC00854-213ENST00000608223 NSD2O96028 1365 aa19.67■□□□□ 0.74
LINC00854-213ENST00000608223 AKT1S1Q96B36 256 aa19.66■□□□□ 0.74
LINC00854-213ENST00000608223 TUBGCP6Q96RT7 1819 aa19.66■□□□□ 0.74
LINC00854-213ENST00000608223 QSER1Q2KHR3 1735 aa19.65■□□□□ 0.74
LINC00854-213ENST00000608223 YY1P25490 414 aa19.65■□□□□ 0.74
LINC00854-213ENST00000608223 SGIP1Q9BQI5 828 aa19.65■□□□□ 0.74
LINC00854-213ENST00000608223 CCER1Q8TC90 406 aaPredicted RBP19.64■□□□□ 0.73
LINC00854-213ENST00000608223 FHDC1Q9C0D6 1143 aaPredicted RBP19.64■□□□□ 0.73
LINC00854-213ENST00000608223 ANKRD26Q9UPS8 1709 aa19.63■□□□□ 0.73
LINC00854-213ENST00000608223 PCDH11XQ9BZA7 1347 aa19.63■□□□□ 0.73
LINC00854-213ENST00000608223 PCDH11YQ9BZA8 1340 aa19.63■□□□□ 0.73
LINC00854-213ENST00000608223 SYT17Q9BSW7 474 aa19.63■□□□□ 0.73
LINC00854-213ENST00000608223 TFCP2L1Q9NZI6 479 aa19.63■□□□□ 0.73
LINC00854-213ENST00000608223 HSPA5P11021 654 aaKnown RBP19.62■□□□□ 0.73
LINC00854-213ENST00000608223 EIF4G2P78344 907 aaKnown RBP eCLIP19.62■□□□□ 0.73
LINC00854-213ENST00000608223 ARXQ96QS3 562 aa19.62■□□□□ 0.73
LINC00854-213ENST00000608223 CCNL1Q9UK58 526 aaPredicted RBP19.62■□□□□ 0.73
LINC00854-213ENST00000608223 ITGB4P16144 1822 aa19.61■□□□□ 0.73
LINC00854-213ENST00000608223 WASHC2AQ641Q2 1341 aa19.6■□□□□ 0.73
LINC00854-213ENST00000608223 PNPLA7Q6ZV29 1317 aa19.6■□□□□ 0.73
LINC00854-213ENST00000608223 TNNT2P45379 298 aaPredicted RBP19.6■□□□□ 0.73
LINC00854-213ENST00000608223 PKD1L3Q7Z443 1732 aa19.59■□□□□ 0.73
LINC00854-213ENST00000608223 CYP27B1O15528 508 aa19.59■□□□□ 0.73
LINC00854-213ENST00000608223 MPRIPQ6WCQ1 1025 aa19.59■□□□□ 0.73
LINC00854-213ENST00000608223 SLC16A10Q8TF71 515 aa19.59■□□□□ 0.73
LINC00854-213ENST00000608223 POLKQ9UBT6 870 aa19.59■□□□□ 0.73
LINC00854-213ENST00000608223 EYA1Q99502 592 aa19.58■□□□□ 0.72
LINC00854-213ENST00000608223 TOGARAM1Q9Y4F4 1720 aa19.58■□□□□ 0.72
LINC00854-213ENST00000608223 C5P01031 1676 aa19.56■□□□□ 0.72
LINC00854-213ENST00000608223 TAF1LQ8IZX4 1826 aa19.56■□□□□ 0.72
LINC00854-213ENST00000608223 PANK3Q9H999 370 aa19.56■□□□□ 0.72
LINC00854-213ENST00000608223 NCAPD2Q15021 1401 aa19.56■□□□□ 0.72
LINC00854-213ENST00000608223 COL24A1Q17RW2 1714 aa19.56■□□□□ 0.72
LINC00854-213ENST00000608223 MSH5O43196 834 aa19.55■□□□□ 0.72
LINC00854-213ENST00000608223 POLD1P28340 1107 aa19.55■□□□□ 0.72
LINC00854-213ENST00000608223 KLHL34Q8N239 644 aa19.55■□□□□ 0.72
LINC00854-213ENST00000608223 SPG7Q9UQ90 795 aa19.55■□□□□ 0.72
LINC00854-213ENST00000608223 CHD4Q14839 1912 aa19.54■□□□□ 0.72
LINC00854-213ENST00000608223 PALLDQ8WX93 1383 aa19.54■□□□□ 0.72
LINC00854-213ENST00000608223 UTRNP46939 3433 aa19.54■□□□□ 0.72
LINC00854-213ENST00000608223 EIF4A2Q14240 407 aaKnown RBP19.52■□□□□ 0.72
LINC00854-213ENST00000608223 COL23A1Q86Y22 540 aaPredicted RBP19.52■□□□□ 0.72
LINC00854-213ENST00000608223 NKX1-1Q15270 411 aaPredicted RBP19.51■□□□□ 0.71
LINC00854-213ENST00000608223 PIGBQ92521 554 aa19.51■□□□□ 0.71
LINC00854-213ENST00000608223 MAP3K5Q99683 1374 aa19.51■□□□□ 0.71
LINC00854-213ENST00000608223 SMARCC1Q92922 1105 aaPredicted RBP19.5■□□□□ 0.71
LINC00854-213ENST00000608223 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.49■□□□□ 0.71
LINC00854-213ENST00000608223 IFNL2Q8IZJ0 200 aa19.48■□□□□ 0.71
LINC00854-213ENST00000608223 C4BP0C0L5 1744 aa19.48■□□□□ 0.71
LINC00854-213ENST00000608223 PHKG2P15735 406 aa19.47■□□□□ 0.71
LINC00854-213ENST00000608223 HMGB2P26583 209 aaKnown RBP19.47■□□□□ 0.71
LINC00854-213ENST00000608223 GPR162Q16538 588 aa19.47■□□□□ 0.71
LINC00854-213ENST00000608223 MSL1Q68DK7 614 aa19.47■□□□□ 0.71
LINC00854-213ENST00000608223 TMOD3Q9NYL9 352 aa19.47■□□□□ 0.71
LINC00854-213ENST00000608223 MORC1Q86VD1 984 aa19.46■□□□□ 0.71
LINC00854-213ENST00000608223 UBR3Q6ZT12 1888 aa19.45■□□□□ 0.7
LINC00854-213ENST00000608223 PELP1Q8IZL8 1130 aaKnown RBP19.45■□□□□ 0.7
LINC00854-213ENST00000608223 AK7Q96M32 723 aa19.45■□□□□ 0.7
LINC00854-213ENST00000608223 IGSF1Q8N6C5 1336 aa19.45■□□□□ 0.7
LINC00854-213ENST00000608223 FLAD1Q8NFF5 587 aa19.44■□□□□ 0.7
LINC00854-213ENST00000608223 NLGN2Q8NFZ4 835 aa19.44■□□□□ 0.7
LINC00854-213ENST00000608223 ASAP1Q9ULH1 1129 aa19.44■□□□□ 0.7
LINC00854-213ENST00000608223 KNSTRNQ9Y448 316 aa19.44■□□□□ 0.7
LINC00854-213ENST00000608223 GOLGB1Q14789 3259 aaKnown RBP19.43■□□□□ 0.7
LINC00854-213ENST00000608223 LOC102724428A0A0B4J2F2 783 aa19.43■□□□□ 0.7
LINC00854-213ENST00000608223 SIK1P57059 783 aa19.43■□□□□ 0.7
LINC00854-213ENST00000608223 SMIM5Q71RC9 77 aa19.43■□□□□ 0.7
LINC00854-213ENST00000608223 PHF14O94880 888 aa19.42■□□□□ 0.7
LINC00854-213ENST00000608223 AMIGO3Q86WK7 504 aa19.42■□□□□ 0.7
LINC00854-213ENST00000608223 LINC00116Q8NCU8 138 aa19.41■□□□□ 0.7
LINC00854-213ENST00000608223 ATP6V1AP38606 617 aa19.4■□□□□ 0.7
LINC00854-213ENST00000608223 PLEKHO1Q53GL0 409 aaPredicted RBP19.4■□□□□ 0.7
LINC00854-213ENST00000608223 ZNF784Q8NCA9 323 aaPredicted RBP19.4■□□□□ 0.7
LINC00854-213ENST00000608223 ATG3Q9NT62 314 aa19.4■□□□□ 0.7
LINC00854-213ENST00000608223 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.39■□□□□ 0.69
LINC00854-213ENST00000608223 ITPK1Q13572 414 aa19.38■□□□□ 0.69
LINC00854-213ENST00000608223 KIF7Q2M1P5 1343 aa19.38■□□□□ 0.69
LINC00854-213ENST00000608223 ZNF530Q6P9A1 599 aaPredicted RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms