RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 RGPD2P0DJD1 1756 aa26.25■■□□□ 1.79
CTSA-217ENST00000607482 NUP188Q5SRE5 1749 aa26.25■■□□□ 1.79
CTSA-217ENST00000607482 NSD2O96028 1365 aa26.25■■□□□ 1.79
CTSA-217ENST00000607482 POLKQ9UBT6 870 aa26.25■■□□□ 1.79
CTSA-217ENST00000607482 MEGF6O75095 1541 aa26.24■■□□□ 1.79
CTSA-217ENST00000607482 KIF7Q2M1P5 1343 aa26.23■■□□□ 1.79
CTSA-217ENST00000607482 PRIM1P49642 420 aaKnown RBP26.23■■□□□ 1.79
CTSA-217ENST00000607482 RGPD3A6NKT7 1758 aaPredicted RBP26.23■■□□□ 1.79
CTSA-217ENST00000607482 RGPD4Q7Z3J3 1758 aa26.23■■□□□ 1.79
CTSA-217ENST00000607482 NHSQ6T4R5 1651 aa26.22■■□□□ 1.79
CTSA-217ENST00000607482 PCDH11XQ9BZA7 1347 aa26.22■■□□□ 1.79
CTSA-217ENST00000607482 PCDH11YQ9BZA8 1340 aa26.22■■□□□ 1.79
CTSA-217ENST00000607482 PROM2Q8N271 834 aa26.22■■□□□ 1.79
CTSA-217ENST00000607482 PPP1R1BQ9UD71 204 aaPredicted RBP26.2■■□□□ 1.78
CTSA-217ENST00000607482 MAP2P11137 1827 aaKnown RBP26.19■■□□□ 1.78
CTSA-217ENST00000607482 SPG7Q9UQ90 795 aa26.19■■□□□ 1.78
CTSA-217ENST00000607482 LRP5O75197 1615 aa26.18■■□□□ 1.78
CTSA-217ENST00000607482 SPON1Q9HCB6 807 aa26.18■■□□□ 1.78
CTSA-217ENST00000607482 ANO8Q9HCE9 1232 aaPredicted RBP26.18■■□□□ 1.78
CTSA-217ENST00000607482 EYA1Q99502 592 aa26.17■■□□□ 1.78
CTSA-217ENST00000607482 ANKRD26Q9UPS8 1709 aa26.16■■□□□ 1.78
CTSA-217ENST00000607482 EIF4A2Q14240 407 aaKnown RBP26.15■■□□□ 1.78
CTSA-217ENST00000607482 SLC15A2Q16348 729 aa26.15■■□□□ 1.78
CTSA-217ENST00000607482 BTAF1O14981 1849 aa26.14■■□□□ 1.77
CTSA-217ENST00000607482 SLC27A3Q5K4L6 730 aa26.13■■□□□ 1.77
CTSA-217ENST00000607482 CNGB1Q14028 1251 aaPredicted RBP26.12■■□□□ 1.77
CTSA-217ENST00000607482 MPRIPQ6WCQ1 1025 aa26.11■■□□□ 1.77
CTSA-217ENST00000607482 CC2D1BQ5T0F9 858 aaKnown RBP26.1■■□□□ 1.77
CTSA-217ENST00000607482 CYP27B1O15528 508 aa26.09■■□□□ 1.77
CTSA-217ENST00000607482 ZBTB7AO95365 584 aa26.09■■□□□ 1.77
CTSA-217ENST00000607482 DOT1LQ8TEK3 1739 aa26.08■■□□□ 1.77
CTSA-217ENST00000607482 AMER1Q5JTC6 1135 aaPredicted RBP26.08■■□□□ 1.77
CTSA-217ENST00000607482 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.08■■□□□ 1.77
CTSA-217ENST00000607482 CCNL1Q9UK58 526 aaPredicted RBP26.08■■□□□ 1.77
CTSA-217ENST00000607482 HMGB2P26583 209 aaKnown RBP26.06■■□□□ 1.76
CTSA-217ENST00000607482 IFNL2Q8IZJ0 200 aa26.06■■□□□ 1.76
CTSA-217ENST00000607482 LRRC4BQ9NT99 713 aa26.06■■□□□ 1.76
CTSA-217ENST00000607482 TFCP2L1Q9NZI6 479 aa26.06■■□□□ 1.76
CTSA-217ENST00000607482 SHANK3Q9BYB0 1731 aa26.05■■□□□ 1.76
CTSA-217ENST00000607482 KCNQ4P56696 695 aa26.05■■□□□ 1.76
CTSA-217ENST00000607482 ATF5Q9Y2D1 282 aaPredicted RBP26.05■■□□□ 1.76
CTSA-217ENST00000607482 PLEKHO1Q53GL0 409 aaPredicted RBP26.04■■□□□ 1.76
CTSA-217ENST00000607482 PDGFDQ9GZP0 370 aaPredicted RBP26.04■■□□□ 1.76
CTSA-217ENST00000607482 DCAF8L1A6NGE4 600 aa26.02■■□□□ 1.76
CTSA-217ENST00000607482 SMARCC1Q92922 1105 aaPredicted RBP26.02■■□□□ 1.76
CTSA-217ENST00000607482 TMOD3Q9NYL9 352 aa26.02■■□□□ 1.76
CTSA-217ENST00000607482 IGSF1Q8N6C5 1336 aa26.02■■□□□ 1.76
CTSA-217ENST00000607482 NCAPD2Q15021 1401 aa26.02■■□□□ 1.76
CTSA-217ENST00000607482 MTHFSP49914 203 aa26.01■■□□□ 1.75
CTSA-217ENST00000607482 ZNF827Q17R98 1081 aa26.01■■□□□ 1.75
CTSA-217ENST00000607482 MSH5O43196 834 aa26■■□□□ 1.75
CTSA-217ENST00000607482 PHKG2P15735 406 aa26■■□□□ 1.75
CTSA-217ENST00000607482 AMOTQ4VCS5 1084 aa26■■□□□ 1.75
CTSA-217ENST00000607482 MTFR1LQ9H019 292 aa26■■□□□ 1.75
CTSA-217ENST00000607482 PER1O15534 1290 aaPredicted RBP25.99■■□□□ 1.75
CTSA-217ENST00000607482 NKX1-1Q15270 411 aaPredicted RBP25.99■■□□□ 1.75
CTSA-217ENST00000607482 SULT6B1Q6IMI4 303 aa25.99■■□□□ 1.75
CTSA-217ENST00000607482 HSP90AB1P08238 724 aaKnown RBP25.98■■□□□ 1.75
CTSA-217ENST00000607482 C1orf141Q5JVX7 400 aa25.98■■□□□ 1.75
CTSA-217ENST00000607482 PKD1L3Q7Z443 1732 aa25.97■■□□□ 1.75
CTSA-217ENST00000607482 PALLDQ8WX93 1383 aa25.97■■□□□ 1.75
CTSA-217ENST00000607482 ZNF530Q6P9A1 599 aaPredicted RBP25.97■■□□□ 1.75
CTSA-217ENST00000607482 AKT1S1Q96B36 256 aa25.97■■□□□ 1.75
CTSA-217ENST00000607482 PIGBQ92521 554 aa25.96■■□□□ 1.75
CTSA-217ENST00000607482 AEBP1Q8IUX7 1158 aa25.95■■□□□ 1.74
CTSA-217ENST00000607482 PLEKHG2Q9H7P9 1386 aa25.95■■□□□ 1.74
CTSA-217ENST00000607482 IL13P35225 146 aa25.94■■□□□ 1.74
CTSA-217ENST00000607482 CASZ1Q86V15 1759 aa25.94■■□□□ 1.74
CTSA-217ENST00000607482 DIAPH1O60610 1272 aaKnown RBP25.93■■□□□ 1.74
CTSA-217ENST00000607482 DCAF5Q96JK2 942 aa25.93■■□□□ 1.74
CTSA-217ENST00000607482 SLC16A10Q8TF71 515 aa25.92■■□□□ 1.74
CTSA-217ENST00000607482 PAPPAQ13219 1627 aa25.92■■□□□ 1.74
CTSA-217ENST00000607482 POLD1P28340 1107 aa25.91■■□□□ 1.74
CTSA-217ENST00000607482 CABP4P57796 275 aa25.9■■□□□ 1.74
CTSA-217ENST00000607482 AK7Q96M32 723 aa25.9■■□□□ 1.74
CTSA-217ENST00000607482 LY75O60449 1722 aa25.89■■□□□ 1.74
CTSA-217ENST00000607482 ERVV-2B6SEH9 535 aa25.89■■□□□ 1.74
CTSA-217ENST00000607482 HMOX1P09601 288 aa25.89■■□□□ 1.74
CTSA-217ENST00000607482 PTGER2P43116 358 aa25.89■■□□□ 1.74
CTSA-217ENST00000607482 NPC1L1Q9UHC9 1359 aa25.89■■□□□ 1.74
CTSA-217ENST00000607482 PNPLA7Q6ZV29 1317 aa25.88■■□□□ 1.73
CTSA-217ENST00000607482 ARXQ96QS3 562 aa25.88■■□□□ 1.73
CTSA-217ENST00000607482 U2SURPO15042 1029 aaKnown RBP25.87■■□□□ 1.73
CTSA-217ENST00000607482 CFAP53Q96M91 514 aa25.87■■□□□ 1.73
CTSA-217ENST00000607482 ASAP1Q9ULH1 1129 aa25.87■■□□□ 1.73
CTSA-217ENST00000607482 ITGB4P16144 1822 aa25.86■■□□□ 1.73
CTSA-217ENST00000607482 LOC102724428A0A0B4J2F2 783 aa25.86■■□□□ 1.73
CTSA-217ENST00000607482 SIK1P57059 783 aa25.86■■□□□ 1.73
CTSA-217ENST00000607482 KLHL34Q8N239 644 aa25.86■■□□□ 1.73
CTSA-217ENST00000607482 FLAD1Q8NFF5 587 aa25.86■■□□□ 1.73
CTSA-217ENST00000607482 TOGARAM1Q9Y4F4 1720 aa25.85■■□□□ 1.73
CTSA-217ENST00000607482 ATP6V1AP38606 617 aa25.85■■□□□ 1.73
CTSA-217ENST00000607482 RBM42Q9BTD8 480 aaKnown RBP25.84■■□□□ 1.73
CTSA-217ENST00000607482 KDRP35968 1356 aa25.83■■□□□ 1.73
CTSA-217ENST00000607482 FHDC1Q9C0D6 1143 aaPredicted RBP25.83■■□□□ 1.73
CTSA-217ENST00000607482 ATG3Q9NT62 314 aa25.83■■□□□ 1.73
CTSA-217ENST00000607482 PHF14O94880 888 aa25.81■■□□□ 1.72
CTSA-217ENST00000607482 COL23A1Q86Y22 540 aaPredicted RBP25.81■■□□□ 1.72
CTSA-217ENST00000607482 AKAP4Q5JQC9 854 aa25.8■■□□□ 1.72
CTSA-217ENST00000607482 C5P01031 1676 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms