RNA–Protein interactions for RNA: ENST00000607093.1

LCE1C-202, Transcript of late cornified envelope 1C, humanhuman

APPRIS P2 BASIC

Gene LCE1C, Length 644 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCE1C-202ENST00000607093 NSD2O96028 1365 aa25.56■■□□□ 1.68
LCE1C-202ENST00000607093 UTRNP46939 3433 aa25.56■■□□□ 1.68
LCE1C-202ENST00000607093 KLHL34Q8N239 644 aa25.56■■□□□ 1.68
LCE1C-202ENST00000607093 PNPLA7Q6ZV29 1317 aa25.56■■□□□ 1.68
LCE1C-202ENST00000607093 ANKRD36BQ8N2N9 1353 aa25.56■■□□□ 1.68
LCE1C-202ENST00000607093 SLC27A3Q5K4L6 730 aa25.55■■□□□ 1.68
LCE1C-202ENST00000607093 MAP3K5Q99683 1374 aa25.55■■□□□ 1.68
LCE1C-202ENST00000607093 RRS1Q15050 365 aaKnown RBP25.53■■□□□ 1.68
LCE1C-202ENST00000607093 KIF20BQ96Q89 1820 aa25.52■■□□□ 1.68
LCE1C-202ENST00000607093 USHBP1Q8N6Y0 703 aa25.52■■□□□ 1.68
LCE1C-202ENST00000607093 ZCRB1Q8TBF4 217 aaKnown RBP25.52■■□□□ 1.68
LCE1C-202ENST00000607093 TFCP2L1Q9NZI6 479 aa25.52■■□□□ 1.68
LCE1C-202ENST00000607093 GGNBP2Q9H3C7 697 aa25.5■■□□□ 1.67
LCE1C-202ENST00000607093 RTL1A6NKG5 1358 aa25.49■■□□□ 1.67
LCE1C-202ENST00000607093 NBPF6Q5VWK0 638 aa25.49■■□□□ 1.67
LCE1C-202ENST00000607093 SLC16A10Q8TF71 515 aa25.49■■□□□ 1.67
LCE1C-202ENST00000607093 NBPF4Q96M43 638 aa25.49■■□□□ 1.67
LCE1C-202ENST00000607093 POLD1P28340 1107 aa25.48■■□□□ 1.67
LCE1C-202ENST00000607093 GPR162Q16538 588 aa25.48■■□□□ 1.67
LCE1C-202ENST00000607093 FYB1O15117 783 aa25.47■■□□□ 1.67
LCE1C-202ENST00000607093 CCNL1Q9UK58 526 aaPredicted RBP25.47■■□□□ 1.67
LCE1C-202ENST00000607093 C5P01031 1676 aa25.46■■□□□ 1.67
LCE1C-202ENST00000607093 PELP1Q8IZL8 1130 aaKnown RBP25.46■■□□□ 1.67
LCE1C-202ENST00000607093 NLGN2Q8NFZ4 835 aa25.45■■□□□ 1.66
LCE1C-202ENST00000607093 TAF1LQ8IZX4 1826 aa25.44■■□□□ 1.66
LCE1C-202ENST00000607093 SMG6Q86US8 1419 aaKnown RBP25.43■■□□□ 1.66
LCE1C-202ENST00000607093 TOGARAM1Q9Y4F4 1720 aa25.43■■□□□ 1.66
LCE1C-202ENST00000607093 USP47Q96K76 1375 aa25.43■■□□□ 1.66
LCE1C-202ENST00000607093 MSH5O43196 834 aa25.42■■□□□ 1.66
LCE1C-202ENST00000607093 ITGB4P16144 1822 aa25.42■■□□□ 1.66
LCE1C-202ENST00000607093 TMF1P82094 1093 aa25.41■■□□□ 1.66
LCE1C-202ENST00000607093 HSP90AB2PQ58FF8 381 aa25.41■■□□□ 1.66
LCE1C-202ENST00000607093 COL23A1Q86Y22 540 aaPredicted RBP25.41■■□□□ 1.66
LCE1C-202ENST00000607093 RAPGEF4Q8WZA2 1011 aa25.41■■□□□ 1.66
LCE1C-202ENST00000607093 SLC24A1O60721 1099 aa25.39■■□□□ 1.66
LCE1C-202ENST00000607093 MSL1Q68DK7 614 aa25.39■■□□□ 1.66
LCE1C-202ENST00000607093 TATP17735 454 aaPredicted RBP25.38■■□□□ 1.65
LCE1C-202ENST00000607093 CGNL1Q0VF96 1302 aa25.37■■□□□ 1.65
LCE1C-202ENST00000607093 INSRP06213 1382 aa25.37■■□□□ 1.65
LCE1C-202ENST00000607093 PKD1L3Q7Z443 1732 aa25.37■■□□□ 1.65
LCE1C-202ENST00000607093 FLT4P35916 1363 aa25.36■■□□□ 1.65
LCE1C-202ENST00000607093 PCDH11XQ9BZA7 1347 aa25.36■■□□□ 1.65
LCE1C-202ENST00000607093 PCDH11YQ9BZA8 1340 aa25.36■■□□□ 1.65
LCE1C-202ENST00000607093 SENP3-EIF4A1A0A087X0R7 540 aa25.35■■□□□ 1.65
LCE1C-202ENST00000607093 C1QTNF8P60827 252 aa25.35■■□□□ 1.65
LCE1C-202ENST00000607093 YBX3P16989 372 aaKnown RBP eCLIP25.34■■□□□ 1.65
LCE1C-202ENST00000607093 PALLDQ8WX93 1383 aa25.33■■□□□ 1.65
LCE1C-202ENST00000607093 C4BP0C0L5 1744 aa25.33■■□□□ 1.65
LCE1C-202ENST00000607093 MPRIPQ6WCQ1 1025 aa25.33■■□□□ 1.65
LCE1C-202ENST00000607093 EMILIN1Q9Y6C2 1016 aa25.33■■□□□ 1.65
LCE1C-202ENST00000607093 CYP27B1O15528 508 aa25.32■■□□□ 1.64
LCE1C-202ENST00000607093 ANKRD26Q9UPS8 1709 aa25.32■■□□□ 1.64
LCE1C-202ENST00000607093 CARD14Q9BXL6 1004 aa25.31■■□□□ 1.64
LCE1C-202ENST00000607093 MAP2P11137 1827 aaKnown RBP25.3■■□□□ 1.64
LCE1C-202ENST00000607093 NSD3Q9BZ95 1437 aa25.3■■□□□ 1.64
LCE1C-202ENST00000607093 UBR3Q6ZT12 1888 aa25.3■■□□□ 1.64
LCE1C-202ENST00000607093 GOLGB1Q14789 3259 aaKnown RBP25.3■■□□□ 1.64
LCE1C-202ENST00000607093 KIF24Q5T7B8 1368 aa25.29■■□□□ 1.64
LCE1C-202ENST00000607093 SMIM5Q71RC9 77 aa25.27■■□□□ 1.64
LCE1C-202ENST00000607093 AMIGO3Q86WK7 504 aa25.27■■□□□ 1.64
LCE1C-202ENST00000607093 PPM1GO15355 546 aaPredicted RBP25.26■■□□□ 1.63
LCE1C-202ENST00000607093 GIGYF1O75420 1035 aaPredicted RBP25.26■■□□□ 1.63
LCE1C-202ENST00000607093 CDCA8Q53HL2 280 aa25.25■■□□□ 1.63
LCE1C-202ENST00000607093 NCAPD2Q15021 1401 aa25.24■■□□□ 1.63
LCE1C-202ENST00000607093 PIGBQ92521 554 aa25.23■■□□□ 1.63
LCE1C-202ENST00000607093 GRIN3BO60391 1043 aa25.22■■□□□ 1.63
LCE1C-202ENST00000607093 PHF14O94880 888 aa25.22■■□□□ 1.63
LCE1C-202ENST00000607093 AK7Q96M32 723 aa25.22■■□□□ 1.63
LCE1C-202ENST00000607093 FLAD1Q8NFF5 587 aa25.21■■□□□ 1.63
LCE1C-202ENST00000607093 SMARCC1Q92922 1105 aaPredicted RBP25.2■■□□□ 1.62
LCE1C-202ENST00000607093 WWC3Q9ULE0 1092 aa25.19■■□□□ 1.62
LCE1C-202ENST00000607093 CD2APQ9Y5K6 639 aa25.19■■□□□ 1.62
LCE1C-202ENST00000607093 NKX1-1Q15270 411 aaPredicted RBP25.18■■□□□ 1.62
LCE1C-202ENST00000607093 EYA1Q99502 592 aa25.18■■□□□ 1.62
LCE1C-202ENST00000607093 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.17■■□□□ 1.62
LCE1C-202ENST00000607093 TRIM26Q12899 539 aaPredicted RBP25.17■■□□□ 1.62
LCE1C-202ENST00000607093 LINC00116Q8NCU8 138 aa25.17■■□□□ 1.62
LCE1C-202ENST00000607093 SPG7Q9UQ90 795 aa25.17■■□□□ 1.62
LCE1C-202ENST00000607093 ATP10DQ9P241 1426 aa25.17■■□□□ 1.62
LCE1C-202ENST00000607093 WASHC2AQ641Q2 1341 aa25.16■■□□□ 1.62
LCE1C-202ENST00000607093 LOC102724428A0A0B4J2F2 783 aa25.14■■□□□ 1.62
LCE1C-202ENST00000607093 SIK1P57059 783 aa25.14■■□□□ 1.62
LCE1C-202ENST00000607093 POLR3GLQ9BT43 218 aa25.14■■□□□ 1.62
LCE1C-202ENST00000607093 TMOD3Q9NYL9 352 aa25.14■■□□□ 1.62
LCE1C-202ENST00000607093 ASAP1Q9ULH1 1129 aa25.14■■□□□ 1.62
LCE1C-202ENST00000607093 HMGB2P26583 209 aaKnown RBP25.13■■□□□ 1.61
LCE1C-202ENST00000607093 ITPK1Q13572 414 aa25.13■■□□□ 1.61
LCE1C-202ENST00000607093 POLKQ9UBT6 870 aa25.13■■□□□ 1.61
LCE1C-202ENST00000607093 TNNT2P45379 298 aaPredicted RBP25.12■■□□□ 1.61
LCE1C-202ENST00000607093 IGSF1Q8N6C5 1336 aa25.12■■□□□ 1.61
LCE1C-202ENST00000607093 PHKG2P15735 406 aa25.11■■□□□ 1.61
LCE1C-202ENST00000607093 GNPATO15228 680 aa25.1■■□□□ 1.61
LCE1C-202ENST00000607093 SSFA2P28290 1259 aa25.1■■□□□ 1.61
LCE1C-202ENST00000607093 ATP6V1AP38606 617 aa25.09■■□□□ 1.61
LCE1C-202ENST00000607093 EIF4A2Q14240 407 aaKnown RBP25.09■■□□□ 1.61
LCE1C-202ENST00000607093 IFNL2Q8IZJ0 200 aa25.09■■□□□ 1.61
LCE1C-202ENST00000607093 ZNF526Q8TF50 670 aaPredicted RBP25.09■■□□□ 1.61
LCE1C-202ENST00000607093 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.09■■□□□ 1.61
LCE1C-202ENST00000607093 ADCY9O60503 1353 aa25.08■■□□□ 1.61
LCE1C-202ENST00000607093 ATG3Q9NT62 314 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms