RNA–Protein interactions for RNA: ENST00000605875.1

CCDC12-213, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-213ENST00000605875 AKT1S1Q96B36 256 aa25.37■■□□□ 1.65
CCDC12-213ENST00000605875 RRS1Q15050 365 aaKnown RBP25.35■■□□□ 1.65
CCDC12-213ENST00000605875 DOT1LQ8TEK3 1739 aa25.34■■□□□ 1.65
CCDC12-213ENST00000605875 GGNBP2Q9H3C7 697 aa25.34■■□□□ 1.65
CCDC12-213ENST00000605875 RTL1A6NKG5 1358 aa25.33■■□□□ 1.65
CCDC12-213ENST00000605875 FYB1O15117 783 aa25.33■■□□□ 1.65
CCDC12-213ENST00000605875 SHANK3Q9BYB0 1731 aa25.33■■□□□ 1.65
CCDC12-213ENST00000605875 MEGF6O75095 1541 aa25.32■■□□□ 1.64
CCDC12-213ENST00000605875 QSER1Q2KHR3 1735 aa25.32■■□□□ 1.64
CCDC12-213ENST00000605875 KCNQ4P56696 695 aa25.32■■□□□ 1.64
CCDC12-213ENST00000605875 NBPF6Q5VWK0 638 aa25.32■■□□□ 1.64
CCDC12-213ENST00000605875 SLC16A10Q8TF71 515 aa25.32■■□□□ 1.64
CCDC12-213ENST00000605875 NBPF4Q96M43 638 aa25.32■■□□□ 1.64
CCDC12-213ENST00000605875 KIF20BQ96Q89 1820 aa25.31■■□□□ 1.64
CCDC12-213ENST00000605875 TFCP2L1Q9NZI6 479 aa25.31■■□□□ 1.64
CCDC12-213ENST00000605875 PNPLA7Q6ZV29 1317 aa25.31■■□□□ 1.64
CCDC12-213ENST00000605875 MAP3K5Q99683 1374 aa25.31■■□□□ 1.64
CCDC12-213ENST00000605875 NSD2O96028 1365 aa25.3■■□□□ 1.64
CCDC12-213ENST00000605875 LY75O60449 1722 aa25.29■■□□□ 1.64
CCDC12-213ENST00000605875 CDCA8Q53HL2 280 aa25.29■■□□□ 1.64
CCDC12-213ENST00000605875 USHBP1Q8N6Y0 703 aa25.29■■□□□ 1.64
CCDC12-213ENST00000605875 CHD4Q14839 1912 aa25.28■■□□□ 1.64
CCDC12-213ENST00000605875 POLD1P28340 1107 aa25.28■■□□□ 1.64
CCDC12-213ENST00000605875 TUBGCP6Q96RT7 1819 aa25.28■■□□□ 1.64
CCDC12-213ENST00000605875 SMG6Q86US8 1419 aaKnown RBP25.28■■□□□ 1.64
CCDC12-213ENST00000605875 ZNF784Q8NCA9 323 aaPredicted RBP25.27■■□□□ 1.64
CCDC12-213ENST00000605875 RAPGEF4Q8WZA2 1011 aa25.27■■□□□ 1.64
CCDC12-213ENST00000605875 CGNL1Q0VF96 1302 aa25.27■■□□□ 1.64
CCDC12-213ENST00000605875 KLHL34Q8N239 644 aa25.26■■□□□ 1.63
CCDC12-213ENST00000605875 CCNL1Q9UK58 526 aaPredicted RBP25.26■■□□□ 1.63
CCDC12-213ENST00000605875 COL24A1Q17RW2 1714 aa25.24■■□□□ 1.63
CCDC12-213ENST00000605875 TATP17735 454 aaPredicted RBP25.24■■□□□ 1.63
CCDC12-213ENST00000605875 INSRP06213 1382 aa25.23■■□□□ 1.63
CCDC12-213ENST00000605875 GPR162Q16538 588 aa25.23■■□□□ 1.63
CCDC12-213ENST00000605875 HSP90AB2PQ58FF8 381 aa25.23■■□□□ 1.63
CCDC12-213ENST00000605875 UTRNP46939 3433 aa25.22■■□□□ 1.63
CCDC12-213ENST00000605875 NSD3Q9BZ95 1437 aa25.21■■□□□ 1.63
CCDC12-213ENST00000605875 FLT4P35916 1363 aa25.2■■□□□ 1.63
CCDC12-213ENST00000605875 PCDH11XQ9BZA7 1347 aa25.19■■□□□ 1.62
CCDC12-213ENST00000605875 PCDH11YQ9BZA8 1340 aa25.19■■□□□ 1.62
CCDC12-213ENST00000605875 MSH5O43196 834 aa25.19■■□□□ 1.62
CCDC12-213ENST00000605875 KIF24Q5T7B8 1368 aa25.18■■□□□ 1.62
CCDC12-213ENST00000605875 HSPA5P11021 654 aaKnown RBP25.18■■□□□ 1.62
CCDC12-213ENST00000605875 EIF4G2P78344 907 aaKnown RBP eCLIP25.18■■□□□ 1.621e-7■□□□□ 8.4
CCDC12-213ENST00000605875 COL23A1Q86Y22 540 aaPredicted RBP25.17■■□□□ 1.62
CCDC12-213ENST00000605875 CARD14Q9BXL6 1004 aa25.17■■□□□ 1.62
CCDC12-213ENST00000605875 PELP1Q8IZL8 1130 aaKnown RBP25.16■■□□□ 1.62
CCDC12-213ENST00000605875 POLR3GLQ9BT43 218 aa25.16■■□□□ 1.62
CCDC12-213ENST00000605875 EMILIN1Q9Y6C2 1016 aa25.15■■□□□ 1.62
CCDC12-213ENST00000605875 MPRIPQ6WCQ1 1025 aa25.14■■□□□ 1.62
CCDC12-213ENST00000605875 NLGN2Q8NFZ4 835 aa25.14■■□□□ 1.62
CCDC12-213ENST00000605875 C5P01031 1676 aa25.13■■□□□ 1.61
CCDC12-213ENST00000605875 CYP27B1O15528 508 aa25.13■■□□□ 1.61
CCDC12-213ENST00000605875 HMGB2P26583 209 aaKnown RBP25.12■■□□□ 1.61
CCDC12-213ENST00000605875 PALLDQ8WX93 1383 aa25.12■■□□□ 1.61
CCDC12-213ENST00000605875 PPM1GO15355 546 aaPredicted RBP25.11■■□□□ 1.61
CCDC12-213ENST00000605875 ITGB4P16144 1822 aa25.1■■□□□ 1.61
CCDC12-213ENST00000605875 MSL1Q68DK7 614 aa25.1■■□□□ 1.61
CCDC12-213ENST00000605875 TAF1LQ8IZX4 1826 aa25.09■■□□□ 1.61
CCDC12-213ENST00000605875 ANKRD26Q9UPS8 1709 aa25.09■■□□□ 1.61
CCDC12-213ENST00000605875 FLAD1Q8NFF5 587 aa25.08■■□□□ 1.61
CCDC12-213ENST00000605875 PKD1L3Q7Z443 1732 aa25.08■■□□□ 1.61
CCDC12-213ENST00000605875 TOGARAM1Q9Y4F4 1720 aa25.08■■□□□ 1.61
CCDC12-213ENST00000605875 SMARCC1Q92922 1105 aaPredicted RBP25.07■■□□□ 1.6
CCDC12-213ENST00000605875 MAP2P11137 1827 aaKnown RBP25.07■■□□□ 1.6
CCDC12-213ENST00000605875 SPG7Q9UQ90 795 aa25.06■■□□□ 1.6
CCDC12-213ENST00000605875 NCAPD2Q15021 1401 aa25.05■■□□□ 1.6
CCDC12-213ENST00000605875 WASHC2AQ641Q2 1341 aa25.05■■□□□ 1.6
CCDC12-213ENST00000605875 C1QTNF8P60827 252 aa25.04■■□□□ 1.6
CCDC12-213ENST00000605875 NKX1-1Q15270 411 aaPredicted RBP25.04■■□□□ 1.6
CCDC12-213ENST00000605875 PIGBQ92521 554 aa25.04■■□□□ 1.6
CCDC12-213ENST00000605875 EYA1Q99502 592 aa25.04■■□□□ 1.6
CCDC12-213ENST00000605875 GRIN3BO60391 1043 aa25.03■■□□□ 1.6
CCDC12-213ENST00000605875 YBX3P16989 372 aaKnown RBP eCLIP25.03■■□□□ 1.6
CCDC12-213ENST00000605875 AK7Q96M32 723 aa25.03■■□□□ 1.6
CCDC12-213ENST00000605875 C4BP0C0L5 1744 aa25.03■■□□□ 1.6
CCDC12-213ENST00000605875 POLKQ9UBT6 870 aa25.01■■□□□ 1.59
CCDC12-213ENST00000605875 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25■■□□□ 1.59
CCDC12-213ENST00000605875 CD2APQ9Y5K6 639 aa25■■□□□ 1.59
CCDC12-213ENST00000605875 SENP3-EIF4A1A0A087X0R7 540 aa24.99■■□□□ 1.59
CCDC12-213ENST00000605875 PHF14O94880 888 aa24.98■■□□□ 1.59
CCDC12-213ENST00000605875 AMIGO3Q86WK7 504 aa24.98■■□□□ 1.59
CCDC12-213ENST00000605875 TMOD3Q9NYL9 352 aa24.98■■□□□ 1.59
CCDC12-213ENST00000605875 UBR3Q6ZT12 1888 aa24.98■■□□□ 1.59
CCDC12-213ENST00000605875 LOC102724428A0A0B4J2F2 783 aa24.97■■□□□ 1.59
CCDC12-213ENST00000605875 GIGYF1O75420 1035 aaPredicted RBP24.97■■□□□ 1.59
CCDC12-213ENST00000605875 SIK1P57059 783 aa24.97■■□□□ 1.59
CCDC12-213ENST00000605875 SMIM5Q71RC9 77 aa24.97■■□□□ 1.59
CCDC12-213ENST00000605875 IFNL2Q8IZJ0 200 aa24.97■■□□□ 1.59
CCDC12-213ENST00000605875 TNNT2P45379 298 aaPredicted RBP24.96■■□□□ 1.59
CCDC12-213ENST00000605875 GOLGB1Q14789 3259 aaKnown RBP24.96■■□□□ 1.59
CCDC12-213ENST00000605875 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.95■■□□□ 1.58
CCDC12-213ENST00000605875 PHKG2P15735 406 aa24.95■■□□□ 1.58
CCDC12-213ENST00000605875 LINC00116Q8NCU8 138 aa24.95■■□□□ 1.58
CCDC12-213ENST00000605875 PANK3Q9H999 370 aa24.95■■□□□ 1.58
CCDC12-213ENST00000605875 EIF4A2Q14240 407 aaKnown RBP24.94■■□□□ 1.58
CCDC12-213ENST00000605875 ASAP1Q9ULH1 1129 aa24.94■■□□□ 1.58
CCDC12-213ENST00000605875 SSFA2P28290 1259 aa24.93■■□□□ 1.58
CCDC12-213ENST00000605875 KIF7Q2M1P5 1343 aa24.92■■□□□ 1.58
CCDC12-213ENST00000605875 ATP6V1AP38606 617 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms