RNA–Protein interactions for RNA: ENST00000605551.2

SRGAP2D-201, Transcript of SLIT-ROBO Rho GTPase activating protein 2D (pseudogene), humanhuman

BASIC

Gene SRGAP2D, Length 1,021 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2D-201ENST00000605551 CLSPNQ9HAW4 1339 aa12.52□□□□□ -0.41
SRGAP2D-201ENST00000605551 RGPD2P0DJD1 1756 aa12.51□□□□□ -0.41
SRGAP2D-201ENST00000605551 FYB1O15117 783 aa12.51□□□□□ -0.41
SRGAP2D-201ENST00000605551 SLC16A10Q8TF71 515 aa12.51□□□□□ -0.41
SRGAP2D-201ENST00000605551 PCDH11XQ9BZA7 1347 aa12.51□□□□□ -0.41
SRGAP2D-201ENST00000605551 PCDH11YQ9BZA8 1340 aa12.51□□□□□ -0.41
SRGAP2D-201ENST00000605551 MEGF6O75095 1541 aa12.51□□□□□ -0.41
SRGAP2D-201ENST00000605551 PTGER2P43116 358 aa12.5□□□□□ -0.41
SRGAP2D-201ENST00000605551 ARXQ96QS3 562 aa12.5□□□□□ -0.41
SRGAP2D-201ENST00000605551 PDGFDQ9GZP0 370 aaPredicted RBP12.5□□□□□ -0.41
SRGAP2D-201ENST00000605551 TFCP2L1Q9NZI6 479 aa12.5□□□□□ -0.41
SRGAP2D-201ENST00000605551 INSRP06213 1382 aa12.5□□□□□ -0.41
SRGAP2D-201ENST00000605551 NSD3Q9BZ95 1437 aa12.5□□□□□ -0.41
SRGAP2D-201ENST00000605551 QSER1Q2KHR3 1735 aa12.5□□□□□ -0.41
SRGAP2D-201ENST00000605551 PRIM1P49642 420 aaKnown RBP12.49□□□□□ -0.41
SRGAP2D-201ENST00000605551 FHDC1Q9C0D6 1143 aaPredicted RBP12.49□□□□□ -0.41
SRGAP2D-201ENST00000605551 CCNL1Q9UK58 526 aaPredicted RBP12.49□□□□□ -0.41
SRGAP2D-201ENST00000605551 ZNF827Q17R98 1081 aa12.48□□□□□ -0.41
SRGAP2D-201ENST00000605551 NBPF6Q5VWK0 638 aa12.48□□□□□ -0.41
SRGAP2D-201ENST00000605551 KLHL34Q8N239 644 aa12.48□□□□□ -0.41
SRGAP2D-201ENST00000605551 USHBP1Q8N6Y0 703 aa12.48□□□□□ -0.41
SRGAP2D-201ENST00000605551 NBPF4Q96M43 638 aa12.48□□□□□ -0.41
SRGAP2D-201ENST00000605551 SYT17Q9BSW7 474 aa12.48□□□□□ -0.41
SRGAP2D-201ENST00000605551 POLR3GLQ9BT43 218 aa12.48□□□□□ -0.41
SRGAP2D-201ENST00000605551 SHANK3Q9BYB0 1731 aa12.48□□□□□ -0.41
SRGAP2D-201ENST00000605551 MSH5O43196 834 aa12.47□□□□□ -0.41
SRGAP2D-201ENST00000605551 FBLN1P23142 703 aa12.47□□□□□ -0.41
SRGAP2D-201ENST00000605551 PCGF6Q9BYE7 350 aa12.47□□□□□ -0.41
SRGAP2D-201ENST00000605551 LY75O60449 1722 aa12.47□□□□□ -0.41
SRGAP2D-201ENST00000605551 MAP3K5Q99683 1374 aa12.46□□□□□ -0.41
SRGAP2D-201ENST00000605551 PPM1GO15355 546 aaPredicted RBP12.46□□□□□ -0.41
SRGAP2D-201ENST00000605551 HSP90AB2PQ58FF8 381 aa12.46□□□□□ -0.41
SRGAP2D-201ENST00000605551 AKT1S1Q96B36 256 aa12.46□□□□□ -0.41
SRGAP2D-201ENST00000605551 LRRC4BQ9NT99 713 aa12.46□□□□□ -0.41
SRGAP2D-201ENST00000605551 CHD4Q14839 1912 aa12.45□□□□□ -0.42
SRGAP2D-201ENST00000605551 PNPLA7Q6ZV29 1317 aa12.44□□□□□ -0.42
SRGAP2D-201ENST00000605551 FLAD1Q8NFF5 587 aa12.44□□□□□ -0.42
SRGAP2D-201ENST00000605551 SMARCC1Q92922 1105 aaPredicted RBP12.44□□□□□ -0.42
SRGAP2D-201ENST00000605551 SGIP1Q9BQI5 828 aa12.44□□□□□ -0.42
SRGAP2D-201ENST00000605551 SPG7Q9UQ90 795 aa12.44□□□□□ -0.42
SRGAP2D-201ENST00000605551 NSD2O96028 1365 aa12.43□□□□□ -0.42
SRGAP2D-201ENST00000605551 GPR162Q16538 588 aa12.43□□□□□ -0.42
SRGAP2D-201ENST00000605551 EMILIN1Q9Y6C2 1016 aa12.43□□□□□ -0.42
SRGAP2D-201ENST00000605551 TUBGCP6Q96RT7 1819 aa12.43□□□□□ -0.42
SRGAP2D-201ENST00000605551 PALLDQ8WX93 1383 aa12.43□□□□□ -0.42
SRGAP2D-201ENST00000605551 C5P01031 1676 aa12.42□□□□□ -0.42
SRGAP2D-201ENST00000605551 MAP2P11137 1827 aaKnown RBP12.42□□□□□ -0.42
SRGAP2D-201ENST00000605551 EIF4G2P78344 907 aaKnown RBP eCLIP12.42□□□□□ -0.42
SRGAP2D-201ENST00000605551 MPRIPQ6WCQ1 1025 aa12.42□□□□□ -0.42
SRGAP2D-201ENST00000605551 PELP1Q8IZL8 1130 aaKnown RBP12.42□□□□□ -0.42
SRGAP2D-201ENST00000605551 PKD1L3Q7Z443 1732 aa12.42□□□□□ -0.42
SRGAP2D-201ENST00000605551 ANKRD26Q9UPS8 1709 aa12.42□□□□□ -0.42
SRGAP2D-201ENST00000605551 AK7Q96M32 723 aa12.41□□□□□ -0.42
SRGAP2D-201ENST00000605551 WASHC2AQ641Q2 1341 aa12.4□□□□□ -0.42
SRGAP2D-201ENST00000605551 KCNQ4P56696 695 aa12.4□□□□□ -0.42
SRGAP2D-201ENST00000605551 CARD14Q9BXL6 1004 aa12.4□□□□□ -0.42
SRGAP2D-201ENST00000605551 ITGB4P16144 1822 aa12.39□□□□□ -0.43
SRGAP2D-201ENST00000605551 CCER1Q8TC90 406 aaPredicted RBP12.39□□□□□ -0.43
SRGAP2D-201ENST00000605551 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.39□□□□□ -0.43
SRGAP2D-201ENST00000605551 TMOD3Q9NYL9 352 aa12.39□□□□□ -0.43
SRGAP2D-201ENST00000605551 PLEKHG2Q9H7P9 1386 aa12.39□□□□□ -0.43
SRGAP2D-201ENST00000605551 COL24A1Q17RW2 1714 aa12.39□□□□□ -0.43
SRGAP2D-201ENST00000605551 CYP27B1O15528 508 aa12.38□□□□□ -0.43
SRGAP2D-201ENST00000605551 IFNL2Q8IZJ0 200 aa12.38□□□□□ -0.43
SRGAP2D-201ENST00000605551 TAF1LQ8IZX4 1826 aa12.38□□□□□ -0.43
SRGAP2D-201ENST00000605551 NCAPD2Q15021 1401 aa12.37□□□□□ -0.43
SRGAP2D-201ENST00000605551 GRIN3BO60391 1043 aa12.37□□□□□ -0.43
SRGAP2D-201ENST00000605551 HSP90AB1P08238 724 aaKnown RBP12.37□□□□□ -0.43
SRGAP2D-201ENST00000605551 TNNT2P45379 298 aaPredicted RBP12.37□□□□□ -0.43
SRGAP2D-201ENST00000605551 TOGARAM1Q9Y4F4 1720 aa12.37□□□□□ -0.43
SRGAP2D-201ENST00000605551 COL23A1Q86Y22 540 aaPredicted RBP12.36□□□□□ -0.43
SRGAP2D-201ENST00000605551 ZNF784Q8NCA9 323 aaPredicted RBP12.36□□□□□ -0.43
SRGAP2D-201ENST00000605551 EYA1Q99502 592 aa12.36□□□□□ -0.43
SRGAP2D-201ENST00000605551 POLKQ9UBT6 870 aa12.36□□□□□ -0.43
SRGAP2D-201ENST00000605551 C4BP0C0L5 1744 aa12.36□□□□□ -0.43
SRGAP2D-201ENST00000605551 NKX1-1Q15270 411 aaPredicted RBP12.35□□□□□ -0.43
SRGAP2D-201ENST00000605551 MSL1Q68DK7 614 aa12.35□□□□□ -0.43
SRGAP2D-201ENST00000605551 PHF14O94880 888 aa12.34□□□□□ -0.43
SRGAP2D-201ENST00000605551 HSPA5P11021 654 aaKnown RBP12.34□□□□□ -0.43
SRGAP2D-201ENST00000605551 SSFA2P28290 1259 aa12.34□□□□□ -0.43
SRGAP2D-201ENST00000605551 MORC1Q86VD1 984 aa12.34□□□□□ -0.43
SRGAP2D-201ENST00000605551 PIGBQ92521 554 aa12.34□□□□□ -0.43
SRGAP2D-201ENST00000605551 KNSTRNQ9Y448 316 aa12.34□□□□□ -0.43
SRGAP2D-201ENST00000605551 LOC102724428A0A0B4J2F2 783 aa12.33□□□□□ -0.44
SRGAP2D-201ENST00000605551 PHKG2P15735 406 aa12.33□□□□□ -0.44
SRGAP2D-201ENST00000605551 SIK1P57059 783 aa12.33□□□□□ -0.44
SRGAP2D-201ENST00000605551 EIF4A2Q14240 407 aaKnown RBP12.33□□□□□ -0.44
SRGAP2D-201ENST00000605551 PLEKHO1Q53GL0 409 aaPredicted RBP12.33□□□□□ -0.44
SRGAP2D-201ENST00000605551 PANK3Q9H999 370 aa12.33□□□□□ -0.44
SRGAP2D-201ENST00000605551 CD2APQ9Y5K6 639 aa12.33□□□□□ -0.44
SRGAP2D-201ENST00000605551 UBR3Q6ZT12 1888 aa12.32□□□□□ -0.44
SRGAP2D-201ENST00000605551 ATP6V1AP38606 617 aa12.32□□□□□ -0.44
SRGAP2D-201ENST00000605551 AMOTQ4VCS5 1084 aa12.32□□□□□ -0.44
SRGAP2D-201ENST00000605551 C1orf141Q5JVX7 400 aa12.32□□□□□ -0.44
SRGAP2D-201ENST00000605551 NLGN2Q8NFZ4 835 aa12.32□□□□□ -0.44
SRGAP2D-201ENST00000605551 IGSF1Q8N6C5 1336 aa12.32□□□□□ -0.44
SRGAP2D-201ENST00000605551 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.31□□□□□ -0.44
SRGAP2D-201ENST00000605551 GNPATO15228 680 aa12.31□□□□□ -0.44
SRGAP2D-201ENST00000605551 DCAF5Q96JK2 942 aa12.31□□□□□ -0.44
SRGAP2D-201ENST00000605551 ERVV-2B6SEH9 535 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms