RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 RAPGEF4Q8WZA2 1011 aa26.2■■□□□ 1.78
SRSF4-206ENST00000605204 NBPF14Q5TI25 921 aa26.18■■□□□ 1.78
SRSF4-206ENST00000605204 BCL11BQ9C0K0 894 aaPredicted RBP26.18■■□□□ 1.78
SRSF4-206ENST00000605204 NCAPD2Q15021 1401 aa26.18■■□□□ 1.78
SRSF4-206ENST00000605204 MEGF6O75095 1541 aa26.16■■□□□ 1.78
SRSF4-206ENST00000605204 PLEKHG2Q9H7P9 1386 aa26.16■■□□□ 1.78
SRSF4-206ENST00000605204 PAPPAQ13219 1627 aa26.14■■□□□ 1.78
SRSF4-206ENST00000605204 TATP17735 454 aaPredicted RBP26.14■■□□□ 1.78
SRSF4-206ENST00000605204 ZCRB1Q8TBF4 217 aaKnown RBP26.13■■□□□ 1.77
SRSF4-206ENST00000605204 PDGFDQ9GZP0 370 aaPredicted RBP26.13■■□□□ 1.77
SRSF4-206ENST00000605204 PLSCR1O15162 318 aa26.12■■□□□ 1.77
SRSF4-206ENST00000605204 MAP2P11137 1827 aaKnown RBP26.12■■□□□ 1.77
SRSF4-206ENST00000605204 PROM2Q8N271 834 aa26.11■■□□□ 1.77
SRSF4-206ENST00000605204 USHBP1Q8N6Y0 703 aa26.1■■□□□ 1.77
SRSF4-206ENST00000605204 SPON1Q9HCB6 807 aa26.1■■□□□ 1.77
SRSF4-206ENST00000605204 BTAF1O14981 1849 aa26.1■■□□□ 1.77
SRSF4-206ENST00000605204 KCNQ2O43526 872 aa26.09■■□□□ 1.77
SRSF4-206ENST00000605204 ZEB1P37275 1124 aaPredicted RBP26.09■■□□□ 1.77
SRSF4-206ENST00000605204 EIF4A2Q14240 407 aaKnown RBP26.09■■□□□ 1.77
SRSF4-206ENST00000605204 DDX54Q8TDD1 881 aaKnown RBP26.08■■□□□ 1.77
SRSF4-206ENST00000605204 EYA1Q99502 592 aa26.08■■□□□ 1.77
SRSF4-206ENST00000605204 RGPD2P0DJD1 1756 aa26.08■■□□□ 1.77
SRSF4-206ENST00000605204 PCDH11XQ9BZA7 1347 aa26.08■■□□□ 1.77
SRSF4-206ENST00000605204 PCDH11YQ9BZA8 1340 aa26.08■■□□□ 1.77
SRSF4-206ENST00000605204 CC2D1BQ5T0F9 858 aaKnown RBP26.07■■□□□ 1.76
SRSF4-206ENST00000605204 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.07■■□□□ 1.768e-7■□□□□ 11
SRSF4-206ENST00000605204 IGSF1Q8N6C5 1336 aa26.06■■□□□ 1.76
SRSF4-206ENST00000605204 PPP1R1BQ9UD71 204 aaPredicted RBP26.06■■□□□ 1.76
SRSF4-206ENST00000605204 SPG7Q9UQ90 795 aa26.04■■□□□ 1.76
SRSF4-206ENST00000605204 TXNRD1Q16881 649 aa26.02■■□□□ 1.76
SRSF4-206ENST00000605204 SHANK3Q9BYB0 1731 aa26.02■■□□□ 1.76
SRSF4-206ENST00000605204 ZBTB7AO95365 584 aa26.01■■□□□ 1.75
SRSF4-206ENST00000605204 MTHFSP49914 203 aa26■■□□□ 1.75
SRSF4-206ENST00000605204 ACSBG1Q96GR2 724 aa26■■□□□ 1.75
SRSF4-206ENST00000605204 PKD1L3Q7Z443 1732 aa26■■□□□ 1.75
SRSF4-206ENST00000605204 UTRNP46939 3433 aa25.99■■□□□ 1.75
SRSF4-206ENST00000605204 DOT1LQ8TEK3 1739 aa25.98■■□□□ 1.75
SRSF4-206ENST00000605204 PTGER2P43116 358 aa25.98■■□□□ 1.75
SRSF4-206ENST00000605204 TUBGCP6Q96RT7 1819 aa25.97■■□□□ 1.75
SRSF4-206ENST00000605204 YY1P25490 414 aa25.96■■□□□ 1.75
SRSF4-206ENST00000605204 IL13P35225 146 aa25.96■■□□□ 1.75
SRSF4-206ENST00000605204 KDRP35968 1356 aa25.96■■□□□ 1.75
SRSF4-206ENST00000605204 CYP27B1O15528 508 aa25.95■■□□□ 1.74
SRSF4-206ENST00000605204 STK32BQ9NY57 414 aa25.95■■□□□ 1.74
SRSF4-206ENST00000605204 NKX1-1Q15270 411 aaPredicted RBP25.94■■□□□ 1.74
SRSF4-206ENST00000605204 SLC15A2Q16348 729 aa25.94■■□□□ 1.74
SRSF4-206ENST00000605204 AMOTQ4VCS5 1084 aa25.94■■□□□ 1.74
SRSF4-206ENST00000605204 PRIM1P49642 420 aaKnown RBP25.93■■□□□ 1.74
SRSF4-206ENST00000605204 SYTL4Q96C24 671 aaPredicted RBP25.93■■□□□ 1.74
SRSF4-206ENST00000605204 ATF5Q9Y2D1 282 aaPredicted RBP25.93■■□□□ 1.74
SRSF4-206ENST00000605204 QSER1Q2KHR3 1735 aa25.92■■□□□ 1.74
SRSF4-206ENST00000605204 DIAPH1O60610 1272 aaKnown RBP25.92■■□□□ 1.74
SRSF4-206ENST00000605204 IFNL2Q8IZJ0 200 aa25.92■■□□□ 1.74
SRSF4-206ENST00000605204 PLEKHO1Q53GL0 409 aaPredicted RBP25.91■■□□□ 1.74
SRSF4-206ENST00000605204 HMGB2P26583 209 aaKnown RBP25.9■■□□□ 1.74
SRSF4-206ENST00000605204 ZNF827Q17R98 1081 aa25.9■■□□□ 1.74
SRSF4-206ENST00000605204 SULT6B1Q6IMI4 303 aa25.9■■□□□ 1.74
SRSF4-206ENST00000605204 CFAP53Q96M91 514 aa25.9■■□□□ 1.74
SRSF4-206ENST00000605204 KAT6BQ8WYB5 2073 aa25.89■■□□□ 1.74
SRSF4-206ENST00000605204 HSP90AB1P08238 724 aaKnown RBP25.89■■□□□ 1.74
SRSF4-206ENST00000605204 SLC27A3Q5K4L6 730 aa25.89■■□□□ 1.74
SRSF4-206ENST00000605204 SGIP1Q9BQI5 828 aa25.89■■□□□ 1.74
SRSF4-206ENST00000605204 PHKG2P15735 406 aa25.88■■□□□ 1.73
SRSF4-206ENST00000605204 LY75O60449 1722 aa25.87■■□□□ 1.73
SRSF4-206ENST00000605204 COL24A1Q17RW2 1714 aa25.87■■□□□ 1.73
SRSF4-206ENST00000605204 COL3A1P02461 1466 aaPredicted RBP25.87■■□□□ 1.73
SRSF4-206ENST00000605204 CNGB1Q14028 1251 aaPredicted RBP25.86■■□□□ 1.73
SRSF4-206ENST00000605204 AEBP1Q8IUX7 1158 aa25.85■■□□□ 1.73
SRSF4-206ENST00000605204 FHDC1Q9C0D6 1143 aaPredicted RBP25.85■■□□□ 1.73
SRSF4-206ENST00000605204 LRRC4BQ9NT99 713 aa25.85■■□□□ 1.73
SRSF4-206ENST00000605204 MTFR1LQ9H019 292 aa25.84■■□□□ 1.73
SRSF4-206ENST00000605204 PPP2R1AP30153 589 aa25.83■■□□□ 1.73
SRSF4-206ENST00000605204 C1orf141Q5JVX7 400 aa25.82■■□□□ 1.72
SRSF4-206ENST00000605204 ZNF530Q6P9A1 599 aaPredicted RBP25.82■■□□□ 1.72
SRSF4-206ENST00000605204 DCAF5Q96JK2 942 aa25.82■■□□□ 1.72
SRSF4-206ENST00000605204 SMARCC1Q92922 1105 aaPredicted RBP25.82■■□□□ 1.72
SRSF4-206ENST00000605204 NUDCQ9Y266 331 aa25.81■■□□□ 1.72
SRSF4-206ENST00000605204 MPRIPQ6WCQ1 1025 aa25.8■■□□□ 1.72
SRSF4-206ENST00000605204 TMOD3Q9NYL9 352 aa25.8■■□□□ 1.72
SRSF4-206ENST00000605204 GOLGB1Q14789 3259 aaKnown RBP25.79■■□□□ 1.72
SRSF4-206ENST00000605204 ERVV-2B6SEH9 535 aa25.79■■□□□ 1.72
SRSF4-206ENST00000605204 SYT17Q9BSW7 474 aa25.79■■□□□ 1.72
SRSF4-206ENST00000605204 TOGARAM1Q9Y4F4 1720 aa25.78■■□□□ 1.72
SRSF4-206ENST00000605204 CHD4Q14839 1912 aa25.78■■□□□ 1.72
SRSF4-206ENST00000605204 PALLDQ8WX93 1383 aa25.77■■□□□ 1.72
SRSF4-206ENST00000605204 U2SURPO15042 1029 aaKnown RBP25.77■■□□□ 1.72
SRSF4-206ENST00000605204 MAP3K5Q99683 1374 aa25.76■■□□□ 1.71
SRSF4-206ENST00000605204 DCAF8L1A6NGE4 600 aa25.76■■□□□ 1.71
SRSF4-206ENST00000605204 HMOX1P09601 288 aa25.76■■□□□ 1.71
SRSF4-206ENST00000605204 RALBP1Q15311 655 aa25.76■■□□□ 1.71
SRSF4-206ENST00000605204 AKT1S1Q96B36 256 aa25.76■■□□□ 1.71
SRSF4-206ENST00000605204 CCNL1Q9UK58 526 aaPredicted RBP25.76■■□□□ 1.71
SRSF4-206ENST00000605204 KCNQ4P56696 695 aa25.75■■□□□ 1.71
SRSF4-206ENST00000605204 DDX10Q13206 875 aaKnown RBP25.75■■□□□ 1.71
SRSF4-206ENST00000605204 PIGBQ92521 554 aa25.75■■□□□ 1.71
SRSF4-206ENST00000605204 AKAP4Q5JQC9 854 aa25.74■■□□□ 1.71
SRSF4-206ENST00000605204 PNPLA7Q6ZV29 1317 aa25.73■■□□□ 1.71
SRSF4-206ENST00000605204 KDM6AO15550 1401 aaPredicted RBP25.73■■□□□ 1.71
SRSF4-206ENST00000605204 ARXQ96QS3 562 aa25.72■■□□□ 1.71
SRSF4-206ENST00000605204 C5P01031 1676 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms