RNA–Protein interactions for RNA: ENST00000604922.1

SH3D19-213, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-213ENST00000604922 CLUAP1Q96AJ1 413 aa10.48□□□□□ -0.73
SH3D19-213ENST00000604922 POLMQ9NP87 494 aaPredicted RBP10.48□□□□□ -0.73
SH3D19-213ENST00000604922 TERTO14746 1132 aaKnown RBP10.47□□□□□ -0.73
SH3D19-213ENST00000604922 LORP23490 312 aaPredicted RBP10.47□□□□□ -0.73
SH3D19-213ENST00000604922 SCTRP47872 440 aa10.47□□□□□ -0.73
SH3D19-213ENST00000604922 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.47□□□□□ -0.73
SH3D19-213ENST00000604922 SIRT1Q96EB6 747 aa10.47□□□□□ -0.73
SH3D19-213ENST00000604922 INSM2Q96T92 566 aaPredicted RBP10.47□□□□□ -0.73
SH3D19-213ENST00000604922 SOBPA7XYQ1 873 aa10.46□□□□□ -0.73
SH3D19-213ENST00000604922 MAP7D1Q3KQU3 841 aa10.46□□□□□ -0.73
SH3D19-213ENST00000604922 PROSER2Q86WR7 435 aaPredicted RBP10.46□□□□□ -0.73
SH3D19-213ENST00000604922 ALG2Q9H553 416 aa10.46□□□□□ -0.73
SH3D19-213ENST00000604922 FIGNL2A6NMB9 653 aa10.45□□□□□ -0.74
SH3D19-213ENST00000604922 CDCA7Q9BWT1 371 aaPredicted RBP10.45□□□□□ -0.74
SH3D19-213ENST00000604922 NXF1Q9UBU9 619 aaKnown RBP10.45□□□□□ -0.74
SH3D19-213ENST00000604922 DNMT3LQ9UJW3 386 aa10.45□□□□□ -0.74
SH3D19-213ENST00000604922 FAM181BA6NEQ2 426 aa10.44□□□□□ -0.74
SH3D19-213ENST00000604922 A6NJR5 290 aa10.44□□□□□ -0.74
SH3D19-213ENST00000604922 CTSOP43234 321 aaPredicted RBP10.44□□□□□ -0.74
SH3D19-213ENST00000604922 KDF1Q8NAX2 398 aaPredicted RBP10.44□□□□□ -0.74
SH3D19-213ENST00000604922 OSBPL3Q9H4L5 887 aa10.44□□□□□ -0.74
SH3D19-213ENST00000604922 MEN1O00255 615 aa10.43□□□□□ -0.74
SH3D19-213ENST00000604922 TSGA10IPQ3SY00 556 aa10.43□□□□□ -0.74
SH3D19-213ENST00000604922 OXLD1Q5BKU9 147 aa10.43□□□□□ -0.74
SH3D19-213ENST00000604922 NPAS3Q8IXF0 933 aa10.43□□□□□ -0.74
SH3D19-213ENST00000604922 PLPP7Q8NBV4 271 aa10.43□□□□□ -0.74
SH3D19-213ENST00000604922 SLC16A10Q8TF71 515 aa10.43□□□□□ -0.74
SH3D19-213ENST00000604922 NLRP3Q96P20 1036 aa10.43□□□□□ -0.74
SH3D19-213ENST00000604922 CHIC2Q9UKJ5 165 aa10.43□□□□□ -0.74
SH3D19-213ENST00000604922 A0A1W2PRU2 124 aa10.42□□□□□ -0.74
SH3D19-213ENST00000604922 POM121CA8CG34 1229 aa10.42□□□□□ -0.74
SH3D19-213ENST00000604922 TRAK2O60296 914 aa10.42□□□□□ -0.74
SH3D19-213ENST00000604922 HDGFL1Q5TGJ6 251 aa10.42□□□□□ -0.74
SH3D19-213ENST00000604922 GNRH1P01148 92 aa10.41□□□□□ -0.74
SH3D19-213ENST00000604922 FNBP4Q8N3X1 1017 aaPredicted RBP10.41□□□□□ -0.74
SH3D19-213ENST00000604922 SKIP12755 728 aa10.4□□□□□ -0.74
SH3D19-213ENST00000604922 RNF217Q8TC41 542 aa10.4□□□□□ -0.74
SH3D19-213ENST00000604922 ARHGEF10LQ9HCE6 1279 aa10.4□□□□□ -0.74
SH3D19-213ENST00000604922 LZTS3O60299 673 aaPredicted RBP10.39□□□□□ -0.75
SH3D19-213ENST00000604922 GPC1P35052 558 aa10.39□□□□□ -0.75
SH3D19-213ENST00000604922 RNF144AP50876 292 aaPredicted RBP10.39□□□□□ -0.75
SH3D19-213ENST00000604922 NFATC2IPQ8NCF5 419 aa10.39□□□□□ -0.75
SH3D19-213ENST00000604922 PIK3CDO00329 1044 aa10.38□□□□□ -0.75
SH3D19-213ENST00000604922 CLN3Q13286 438 aa10.38□□□□□ -0.75
SH3D19-213ENST00000604922 ESCO1Q5FWF5 840 aa10.38□□□□□ -0.75
SH3D19-213ENST00000604922 LYSMD3Q7Z3D4 306 aa10.38□□□□□ -0.75
SH3D19-213ENST00000604922 EML3Q32P44 896 aa10.37□□□□□ -0.75
SH3D19-213ENST00000604922 SLC27A3Q5K4L6 730 aa10.37□□□□□ -0.75
SH3D19-213ENST00000604922 FOXD4L5Q5VV16 416 aaPredicted RBP10.37□□□□□ -0.75
SH3D19-213ENST00000604922 GTF3C3Q9Y5Q9 886 aa10.37□□□□□ -0.75
SH3D19-213ENST00000604922 PTSQ03393 145 aa10.36□□□□□ -0.75
SH3D19-213ENST00000604922 ADAMTS19Q8TE59 1207 aa10.36□□□□□ -0.75
SH3D19-213ENST00000604922 RAB6BQ9NRW1 208 aa10.36□□□□□ -0.75
SH3D19-213ENST00000604922 H3BM21 787 aa10.35□□□□□ -0.75
SH3D19-213ENST00000604922 VEGFBP49765 207 aa10.35□□□□□ -0.75
SH3D19-213ENST00000604922 PRICKLE2Q7Z3G6 844 aa10.35□□□□□ -0.75
SH3D19-213ENST00000604922 ZSCAN1Q8NBB4 408 aa10.35□□□□□ -0.75
SH3D19-213ENST00000604922 GLMNQ92990 594 aa10.35□□□□□ -0.75
SH3D19-213ENST00000604922 CNKSR1Q969H4 720 aa10.35□□□□□ -0.75
SH3D19-213ENST00000604922 ESYT1Q9BSJ8 1104 aa10.35□□□□□ -0.75
SH3D19-213ENST00000604922 NOD1Q9Y239 953 aa10.35□□□□□ -0.75
SH3D19-213ENST00000604922 IRF7Q92985 503 aa10.34□□□□□ -0.75
SH3D19-213ENST00000604922 PPFIA3O75145 1194 aa10.33□□□□□ -0.76
SH3D19-213ENST00000604922 GTF2E1P29083 439 aaPredicted RBP10.33□□□□□ -0.76
SH3D19-213ENST00000604922 CALR3Q96L12 384 aaKnown RBP10.33□□□□□ -0.76
SH3D19-213ENST00000604922 USP17L5A8MUK1 530 aa10.32□□□□□ -0.76
SH3D19-213ENST00000604922 NCOA4Q13772 614 aa10.32□□□□□ -0.76
SH3D19-213ENST00000604922 CCDC155Q8N6L0 562 aa10.32□□□□□ -0.76
SH3D19-213ENST00000604922 XAGE2Q96GT9 111 aa10.32□□□□□ -0.76
SH3D19-213ENST00000604922 IL2RAP01589 272 aa10.31□□□□□ -0.76
SH3D19-213ENST00000604922 CENPCQ03188 943 aa10.31□□□□□ -0.76
SH3D19-213ENST00000604922 GRIP2Q9C0E4 1043 aa10.31□□□□□ -0.76
SH3D19-213ENST00000604922 SLC35F4A4IF30 521 aa10.3□□□□□ -0.76
SH3D19-213ENST00000604922 ATP9BO43861 1147 aa10.3□□□□□ -0.76
SH3D19-213ENST00000604922 TBC1D9Q6ZT07 1266 aa10.3□□□□□ -0.76
SH3D19-213ENST00000604922 DEPDC4Q8N2C3 294 aa10.3□□□□□ -0.76
SH3D19-213ENST00000604922 RHOQP17081 205 aa10.29□□□□□ -0.76
SH3D19-213ENST00000604922 GMPRP36959 345 aa10.29□□□□□ -0.76
SH3D19-213ENST00000604922 TRIM50Q86XT4 487 aa10.29□□□□□ -0.76
SH3D19-213ENST00000604922 UCN2Q96RP3 112 aa10.29□□□□□ -0.76
SH3D19-213ENST00000604922 ZSCAN10Q96SZ4 725 aaPredicted RBP10.29□□□□□ -0.76
SH3D19-213ENST00000604922 ETNK1Q9HBU6 452 aa10.29□□□□□ -0.76
SH3D19-213ENST00000604922 USP17L3A6NCW0 530 aa10.28□□□□□ -0.76
SH3D19-213ENST00000604922 USP17L4A6NCW7 530 aa10.28□□□□□ -0.76
SH3D19-213ENST00000604922 GDF10P55107 478 aa10.28□□□□□ -0.76
SH3D19-213ENST00000604922 PSME1Q06323 249 aa10.28□□□□□ -0.76
SH3D19-213ENST00000604922 TMEM214Q6NUQ4 689 aaKnown RBP10.28□□□□□ -0.76
SH3D19-213ENST00000604922 USP17L2Q6R6M4 530 aa10.28□□□□□ -0.76
SH3D19-213ENST00000604922 USP17L1Q7RTZ2 530 aa10.28□□□□□ -0.76
SH3D19-213ENST00000604922 PLEKHM2Q8IWE5 1019 aa10.28□□□□□ -0.76
SH3D19-213ENST00000604922 ZMYND15Q9H091 742 aa10.28□□□□□ -0.76
SH3D19-213ENST00000604922 INHAP05111 366 aa10.27□□□□□ -0.77
SH3D19-213ENST00000604922 GTF2IP78347 998 aa10.27□□□□□ -0.77
SH3D19-213ENST00000604922 POU4F2Q12837 409 aa10.27□□□□□ -0.77
SH3D19-213ENST00000604922 WDR44Q5JSH3 913 aa10.27□□□□□ -0.77
SH3D19-213ENST00000604922 TAS1R3Q7RTX0 852 aa10.27□□□□□ -0.77
SH3D19-213ENST00000604922 ZNF777Q9ULD5 760 aaPredicted RBP10.27□□□□□ -0.77
SH3D19-213ENST00000604922 PCDHGA11Q9Y5H2 935 aa10.27□□□□□ -0.77
SH3D19-213ENST00000604922 SPATA31C2B4DYI2 1134 aa10.26□□□□□ -0.77
SH3D19-213ENST00000604922 ATP1A2P50993 1020 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms