RNA–Protein interactions for RNA: ENST00000604859.1

NEK4P3-201, Transcript of NIMA-related kinase 4 pseudogene 3, humanhuman

BASIC

Gene NEK4P3, Length 544 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P3-201ENST00000604859 QSER1Q2KHR3 1735 aa18.03■□□□□ 0.48
NEK4P3-201ENST00000604859 KCNQ4P56696 695 aa18.02■□□□□ 0.48
NEK4P3-201ENST00000604859 PNPLA7Q6ZV29 1317 aa18.01■□□□□ 0.47
NEK4P3-201ENST00000604859 FYB1O15117 783 aa18.01■□□□□ 0.47
NEK4P3-201ENST00000604859 POLD1P28340 1107 aa18.01■□□□□ 0.47
NEK4P3-201ENST00000604859 RRS1Q15050 365 aaKnown RBP18.01■□□□□ 0.47
NEK4P3-201ENST00000604859 NBPF6Q5VWK0 638 aa18■□□□□ 0.47
NEK4P3-201ENST00000604859 NBPF4Q96M43 638 aa18■□□□□ 0.47
NEK4P3-201ENST00000604859 LY75O60449 1722 aa18■□□□□ 0.47
NEK4P3-201ENST00000604859 DOT1LQ8TEK3 1739 aa18■□□□□ 0.47
NEK4P3-201ENST00000604859 SHANK3Q9BYB0 1731 aa18■□□□□ 0.47
NEK4P3-201ENST00000604859 TMF1P82094 1093 aa17.99■□□□□ 0.47
NEK4P3-201ENST00000604859 GPR162Q16538 588 aa17.99■□□□□ 0.47
NEK4P3-201ENST00000604859 GGNBP2Q9H3C7 697 aa17.99■□□□□ 0.47
NEK4P3-201ENST00000604859 RTL1A6NKG5 1358 aa17.99■□□□□ 0.47
NEK4P3-201ENST00000604859 NSD2O96028 1365 aa17.99■□□□□ 0.47
NEK4P3-201ENST00000604859 CGNL1Q0VF96 1302 aa17.98■□□□□ 0.47
NEK4P3-201ENST00000604859 MEGF6O75095 1541 aa17.98■□□□□ 0.47
NEK4P3-201ENST00000604859 COL24A1Q17RW2 1714 aa17.98■□□□□ 0.47
NEK4P3-201ENST00000604859 TUBGCP6Q96RT7 1819 aa17.98■□□□□ 0.47
NEK4P3-201ENST00000604859 RAPGEF4Q8WZA2 1011 aa17.97■□□□□ 0.47
NEK4P3-201ENST00000604859 CCNL1Q9UK58 526 aaPredicted RBP17.97■□□□□ 0.47
NEK4P3-201ENST00000604859 KLHL34Q8N239 644 aa17.96■□□□□ 0.47
NEK4P3-201ENST00000604859 USHBP1Q8N6Y0 703 aa17.96■□□□□ 0.47
NEK4P3-201ENST00000604859 GOLGB1Q14789 3259 aaKnown RBP17.96■□□□□ 0.46
NEK4P3-201ENST00000604859 USP47Q96K76 1375 aa17.95■□□□□ 0.46
NEK4P3-201ENST00000604859 TATP17735 454 aaPredicted RBP17.95■□□□□ 0.46
NEK4P3-201ENST00000604859 SMG6Q86US8 1419 aaKnown RBP17.95■□□□□ 0.46
NEK4P3-201ENST00000604859 HSP90AB2PQ58FF8 381 aa17.94■□□□□ 0.46
NEK4P3-201ENST00000604859 INSRP06213 1382 aa17.93■□□□□ 0.46
NEK4P3-201ENST00000604859 MSH5O43196 834 aa17.93■□□□□ 0.46
NEK4P3-201ENST00000604859 CDCA8Q53HL2 280 aa17.93■□□□□ 0.46
NEK4P3-201ENST00000604859 COL23A1Q86Y22 540 aaPredicted RBP17.92■□□□□ 0.46
NEK4P3-201ENST00000604859 PELP1Q8IZL8 1130 aaKnown RBP17.92■□□□□ 0.46
NEK4P3-201ENST00000604859 HMGB2P26583 209 aaKnown RBP17.91■□□□□ 0.46
NEK4P3-201ENST00000604859 PCDH11XQ9BZA7 1347 aa17.91■□□□□ 0.46
NEK4P3-201ENST00000604859 PCDH11YQ9BZA8 1340 aa17.91■□□□□ 0.46
NEK4P3-201ENST00000604859 KIF20BQ96Q89 1820 aa17.91■□□□□ 0.46
NEK4P3-201ENST00000604859 KIF24Q5T7B8 1368 aa17.91■□□□□ 0.46
NEK4P3-201ENST00000604859 NLGN2Q8NFZ4 835 aa17.9■□□□□ 0.46
NEK4P3-201ENST00000604859 FLT4P35916 1363 aa17.9■□□□□ 0.46
NEK4P3-201ENST00000604859 C1QTNF8P60827 252 aa17.89■□□□□ 0.45
NEK4P3-201ENST00000604859 MPRIPQ6WCQ1 1025 aa17.89■□□□□ 0.45
NEK4P3-201ENST00000604859 CARD14Q9BXL6 1004 aa17.89■□□□□ 0.45
NEK4P3-201ENST00000604859 C5P01031 1676 aa17.87■□□□□ 0.45
NEK4P3-201ENST00000604859 CYP27B1O15528 508 aa17.87■□□□□ 0.45
NEK4P3-201ENST00000604859 FLAD1Q8NFF5 587 aa17.87■□□□□ 0.45
NEK4P3-201ENST00000604859 ITGB4P16144 1822 aa17.86■□□□□ 0.45
NEK4P3-201ENST00000604859 TAF1LQ8IZX4 1826 aa17.86■□□□□ 0.45
NEK4P3-201ENST00000604859 GRIN3BO60391 1043 aa17.86■□□□□ 0.45
NEK4P3-201ENST00000604859 EMILIN1Q9Y6C2 1016 aa17.86■□□□□ 0.45
NEK4P3-201ENST00000604859 PALLDQ8WX93 1383 aa17.86■□□□□ 0.45
NEK4P3-201ENST00000604859 MSL1Q68DK7 614 aa17.85■□□□□ 0.45
NEK4P3-201ENST00000604859 SMARCC1Q92922 1105 aaPredicted RBP17.85■□□□□ 0.45
NEK4P3-201ENST00000604859 PPM1GO15355 546 aaPredicted RBP17.84■□□□□ 0.45
NEK4P3-201ENST00000604859 SENP3-EIF4A1A0A087X0R7 540 aa17.83■□□□□ 0.44
NEK4P3-201ENST00000604859 YBX3P16989 372 aaKnown RBP eCLIP17.83■□□□□ 0.44
NEK4P3-201ENST00000604859 TRIM26Q12899 539 aaPredicted RBP17.83■□□□□ 0.44
NEK4P3-201ENST00000604859 MAP2P11137 1827 aaKnown RBP17.83■□□□□ 0.44
NEK4P3-201ENST00000604859 NSD3Q9BZ95 1437 aa17.82■□□□□ 0.44
NEK4P3-201ENST00000604859 NKX1-1Q15270 411 aaPredicted RBP17.82■□□□□ 0.44
NEK4P3-201ENST00000604859 PIGBQ92521 554 aa17.82■□□□□ 0.44
NEK4P3-201ENST00000604859 SPG7Q9UQ90 795 aa17.82■□□□□ 0.44
NEK4P3-201ENST00000604859 CD2APQ9Y5K6 639 aa17.82■□□□□ 0.44
NEK4P3-201ENST00000604859 PKD1L3Q7Z443 1732 aa17.81■□□□□ 0.44
NEK4P3-201ENST00000604859 TOGARAM1Q9Y4F4 1720 aa17.81■□□□□ 0.44
NEK4P3-201ENST00000604859 WASHC2AQ641Q2 1341 aa17.81■□□□□ 0.44
NEK4P3-201ENST00000604859 GIGYF1O75420 1035 aaPredicted RBP17.81■□□□□ 0.44
NEK4P3-201ENST00000604859 AK7Q96M32 723 aa17.81■□□□□ 0.44
NEK4P3-201ENST00000604859 C4BP0C0L5 1744 aa17.8■□□□□ 0.44
NEK4P3-201ENST00000604859 NCAPD2Q15021 1401 aa17.8■□□□□ 0.44
NEK4P3-201ENST00000604859 EYA1Q99502 592 aa17.79■□□□□ 0.44
NEK4P3-201ENST00000604859 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.79■□□□□ 0.44
NEK4P3-201ENST00000604859 TIMELESSQ9UNS1 1208 aa17.79■□□□□ 0.44
NEK4P3-201ENST00000604859 UBR3Q6ZT12 1888 aa17.78■□□□□ 0.44
NEK4P3-201ENST00000604859 LOC102724428A0A0B4J2F2 783 aa17.77■□□□□ 0.44
NEK4P3-201ENST00000604859 PHF14O94880 888 aa17.77■□□□□ 0.44
NEK4P3-201ENST00000604859 SIK1P57059 783 aa17.77■□□□□ 0.44
NEK4P3-201ENST00000604859 AMIGO3Q86WK7 504 aa17.77■□□□□ 0.44
NEK4P3-201ENST00000604859 POLKQ9UBT6 870 aa17.77■□□□□ 0.44
NEK4P3-201ENST00000604859 ANKRD26Q9UPS8 1709 aa17.77■□□□□ 0.44
NEK4P3-201ENST00000604859 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.76■□□□□ 0.43
NEK4P3-201ENST00000604859 SMIM5Q71RC9 77 aa17.76■□□□□ 0.43
NEK4P3-201ENST00000604859 TMOD3Q9NYL9 352 aa17.76■□□□□ 0.43
NEK4P3-201ENST00000604859 SSFA2P28290 1259 aa17.75■□□□□ 0.43
NEK4P3-201ENST00000604859 IFNL2Q8IZJ0 200 aa17.75■□□□□ 0.43
NEK4P3-201ENST00000604859 ASAP1Q9ULH1 1129 aa17.75■□□□□ 0.43
NEK4P3-201ENST00000604859 PHKG2P15735 406 aa17.74■□□□□ 0.43
NEK4P3-201ENST00000604859 LINC00116Q8NCU8 138 aa17.74■□□□□ 0.43
NEK4P3-201ENST00000604859 ATP6V1AP38606 617 aa17.73■□□□□ 0.43
NEK4P3-201ENST00000604859 TNNT2P45379 298 aaPredicted RBP17.72■□□□□ 0.43
NEK4P3-201ENST00000604859 POLR3GLQ9BT43 218 aa17.72■□□□□ 0.43
NEK4P3-201ENST00000604859 ITPK1Q13572 414 aa17.71■□□□□ 0.43
NEK4P3-201ENST00000604859 EIF4A2Q14240 407 aaKnown RBP17.71■□□□□ 0.43
NEK4P3-201ENST00000604859 ATG3Q9NT62 314 aa17.71■□□□□ 0.43
NEK4P3-201ENST00000604859 GNPATO15228 680 aa17.7■□□□□ 0.42
NEK4P3-201ENST00000604859 ATP10DQ9P241 1426 aa17.7■□□□□ 0.42
NEK4P3-201ENST00000604859 IGSF1Q8N6C5 1336 aa17.7■□□□□ 0.42
NEK4P3-201ENST00000604859 GPBP1L1Q9HC44 474 aaPredicted RBP17.68■□□□□ 0.42
NEK4P3-201ENST00000604859 PLEKHG2Q9H7P9 1386 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms