RNA–Protein interactions for RNA: ENST00000604654.1

VDAC3P1-201, Transcript of voltage dependent anion channel 3 pseudogene 1, humanhuman

BASIC

Gene VDAC3P1, Length 850 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3P1-201ENST00000604654 PER1O15534 1290 aaPredicted RBP13.22□□□□□ -0.29
VDAC3P1-201ENST00000604654 BCL9O00512 1426 aa13.22□□□□□ -0.29
VDAC3P1-201ENST00000604654 NCAPD2Q15021 1401 aa13.22□□□□□ -0.29
VDAC3P1-201ENST00000604654 SPG7Q9UQ90 795 aa13.21□□□□□ -0.29
VDAC3P1-201ENST00000604654 SCN11AQ9UI33 1791 aa13.21□□□□□ -0.29
VDAC3P1-201ENST00000604654 EIF4A2Q14240 407 aaKnown RBP13.2□□□□□ -0.3
VDAC3P1-201ENST00000604654 USHBP1Q8N6Y0 703 aa13.2□□□□□ -0.3
VDAC3P1-201ENST00000604654 ZCRB1Q8TBF4 217 aaKnown RBP13.2□□□□□ -0.3
VDAC3P1-201ENST00000604654 TOGARAM1Q9Y4F4 1720 aa13.19□□□□□ -0.3
VDAC3P1-201ENST00000604654 MTHFSP49914 203 aa13.19□□□□□ -0.3
VDAC3P1-201ENST00000604654 NBPF6Q5VWK0 638 aa13.19□□□□□ -0.3
VDAC3P1-201ENST00000604654 NBPF4Q96M43 638 aa13.19□□□□□ -0.3
VDAC3P1-201ENST00000604654 NUDCQ9Y266 331 aa13.19□□□□□ -0.3
VDAC3P1-201ENST00000604654 LY75O60449 1722 aa13.19□□□□□ -0.3
VDAC3P1-201ENST00000604654 IGSF1Q8N6C5 1336 aa13.18□□□□□ -0.3
VDAC3P1-201ENST00000604654 DIAPH1O60610 1272 aaKnown RBP13.18□□□□□ -0.3
VDAC3P1-201ENST00000604654 TRIM37O94972 964 aa13.18□□□□□ -0.3
VDAC3P1-201ENST00000604654 FAM182BQ5T319 152 aa13.18□□□□□ -0.3
VDAC3P1-201ENST00000604654 DDX54Q8TDD1 881 aaKnown RBP13.18□□□□□ -0.3
VDAC3P1-201ENST00000604654 NEFMP07197 916 aa13.17□□□□□ -0.3
VDAC3P1-201ENST00000604654 DDX10Q13206 875 aaKnown RBP13.17□□□□□ -0.3
VDAC3P1-201ENST00000604654 APBA3O96018 575 aa13.16□□□□□ -0.3
VDAC3P1-201ENST00000604654 RALBP1Q15311 655 aa13.16□□□□□ -0.3
VDAC3P1-201ENST00000604654 MARCH10Q8NA82 808 aaPredicted RBP13.16□□□□□ -0.3
VDAC3P1-201ENST00000604654 EYA1Q99502 592 aa13.16□□□□□ -0.3
VDAC3P1-201ENST00000604654 COL3A1P02461 1466 aaPredicted RBP13.16□□□□□ -0.3
VDAC3P1-201ENST00000604654 ZNF316A6NFI3 1004 aaPredicted RBP13.15□□□□□ -0.3
VDAC3P1-201ENST00000604654 U2SURPO15042 1029 aaKnown RBP13.15□□□□□ -0.3
VDAC3P1-201ENST00000604654 HSP90AB1P08238 724 aaKnown RBP13.15□□□□□ -0.3
VDAC3P1-201ENST00000604654 HMGB2P26583 209 aaKnown RBP13.15□□□□□ -0.3
VDAC3P1-201ENST00000604654 AMOTQ4VCS5 1084 aa13.15□□□□□ -0.3
VDAC3P1-201ENST00000604654 BCL11BQ9C0K0 894 aaPredicted RBP13.15□□□□□ -0.3
VDAC3P1-201ENST00000604654 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.15□□□□□ -0.3
VDAC3P1-201ENST00000604654 DLG5Q8TDM6 1919 aa13.15□□□□□ -0.3
VDAC3P1-201ENST00000604654 C5P01031 1676 aa13.15□□□□□ -0.31
VDAC3P1-201ENST00000604654 QSER1Q2KHR3 1735 aa13.14□□□□□ -0.31
VDAC3P1-201ENST00000604654 TAF1LQ8IZX4 1826 aa13.14□□□□□ -0.31
VDAC3P1-201ENST00000604654 PLEKHO1Q53GL0 409 aaPredicted RBP13.14□□□□□ -0.31
VDAC3P1-201ENST00000604654 C1orf141Q5JVX7 400 aa13.14□□□□□ -0.31
VDAC3P1-201ENST00000604654 SYTL4Q96C24 671 aaPredicted RBP13.14□□□□□ -0.31
VDAC3P1-201ENST00000604654 KDRP35968 1356 aa13.13□□□□□ -0.31
VDAC3P1-201ENST00000604654 PPP2R1AP30153 589 aa13.12□□□□□ -0.31
VDAC3P1-201ENST00000604654 SULT6B1Q6IMI4 303 aa13.12□□□□□ -0.31
VDAC3P1-201ENST00000604654 IFNL2Q8IZJ0 200 aa13.12□□□□□ -0.31
VDAC3P1-201ENST00000604654 MYBBP1AQ9BQG0 1328 aaKnown RBP13.12□□□□□ -0.31
VDAC3P1-201ENST00000604654 IL13P35225 146 aa13.11□□□□□ -0.31
VDAC3P1-201ENST00000604654 NBPF14Q5TI25 921 aa13.11□□□□□ -0.31
VDAC3P1-201ENST00000604654 DEFB132Q7Z7B7 95 aa13.11□□□□□ -0.31
VDAC3P1-201ENST00000604654 ACSBG1Q96GR2 724 aa13.11□□□□□ -0.31
VDAC3P1-201ENST00000604654 PNNQ9H307 717 aaKnown RBP13.11□□□□□ -0.31
VDAC3P1-201ENST00000604654 EN1Q05925 392 aaPredicted RBP13.1□□□□□ -0.31
VDAC3P1-201ENST00000604654 ZNF530Q6P9A1 599 aaPredicted RBP13.1□□□□□ -0.31
VDAC3P1-201ENST00000604654 ZNF831Q5JPB2 1677 aa13.09□□□□□ -0.31
VDAC3P1-201ENST00000604654 SIPA1L3O60292 1781 aaPredicted RBP13.09□□□□□ -0.31
VDAC3P1-201ENST00000604654 TUBGCP6Q96RT7 1819 aa13.09□□□□□ -0.31
VDAC3P1-201ENST00000604654 PLSCR1O15162 318 aa13.08□□□□□ -0.32
VDAC3P1-201ENST00000604654 HMOX1P09601 288 aa13.08□□□□□ -0.32
VDAC3P1-201ENST00000604654 PAPPAQ13219 1627 aa13.08□□□□□ -0.32
VDAC3P1-201ENST00000604654 ADAMTS7Q9UKP4 1686 aa13.08□□□□□ -0.32
VDAC3P1-201ENST00000604654 U2AF1L5P0DN76 240 aaPredicted RBP13.07□□□□□ -0.32
VDAC3P1-201ENST00000604654 PHKG2P15735 406 aa13.07□□□□□ -0.32
VDAC3P1-201ENST00000604654 U2AF1Q01081 240 aaKnown RBP eCLIP13.07□□□□□ -0.32
VDAC3P1-201ENST00000604654 GAS2L2Q8NHY3 880 aa13.07□□□□□ -0.32
VDAC3P1-201ENST00000604654 TMOD3Q9NYL9 352 aa13.07□□□□□ -0.32
VDAC3P1-201ENST00000604654 MAPK8IP3Q9UPT6 1336 aa13.07□□□□□ -0.32
VDAC3P1-201ENST00000604654 ANP32CO43423 234 aa13.06□□□□□ -0.32
VDAC3P1-201ENST00000604654 WDR43Q15061 677 aaKnown RBP eCLIP13.06□□□□□ -0.32
VDAC3P1-201ENST00000604654 EZH2Q15910 746 aaKnown RBP13.06□□□□□ -0.32
VDAC3P1-201ENST00000604654 AEBP1Q8IUX7 1158 aa13.06□□□□□ -0.32
VDAC3P1-201ENST00000604654 SMARCC1Q92922 1105 aaPredicted RBP13.06□□□□□ -0.32
VDAC3P1-201ENST00000604654 DCAF5Q96JK2 942 aa13.06□□□□□ -0.32
VDAC3P1-201ENST00000604654 LRP5O75197 1615 aa13.06□□□□□ -0.32
VDAC3P1-201ENST00000604654 COL5A3P25940 1745 aaPredicted RBP13.05□□□□□ -0.32
VDAC3P1-201ENST00000604654 CYP27B1O15528 508 aa13.05□□□□□ -0.32
VDAC3P1-201ENST00000604654 PRIM1P49642 420 aaKnown RBP13.05□□□□□ -0.32
VDAC3P1-201ENST00000604654 AKAP4Q5JQC9 854 aa13.05□□□□□ -0.32
VDAC3P1-201ENST00000604654 CICQ96RK0 1608 aaPredicted RBP13.05□□□□□ -0.32
VDAC3P1-201ENST00000604654 UBR2Q8IWV8 1755 aa13.04□□□□□ -0.32
VDAC3P1-201ENST00000604654 MRC1P22897 1456 aa13.04□□□□□ -0.32
VDAC3P1-201ENST00000604654 SLC27A3Q5K4L6 730 aa13.04□□□□□ -0.32
VDAC3P1-201ENST00000604654 MPRIPQ6WCQ1 1025 aa13.04□□□□□ -0.32
VDAC3P1-201ENST00000604654 CAMKK2Q96RR4 588 aa13.04□□□□□ -0.32
VDAC3P1-201ENST00000604654 C4BP0C0L5 1744 aa13.04□□□□□ -0.32
VDAC3P1-201ENST00000604654 MAP3K5Q99683 1374 aa13.04□□□□□ -0.32
VDAC3P1-201ENST00000604654 CASZ1Q86V15 1759 aa13.03□□□□□ -0.32
VDAC3P1-201ENST00000604654 ERVV-2B6SEH9 535 aa13.03□□□□□ -0.32
VDAC3P1-201ENST00000604654 KCNQ2O43526 872 aa13.03□□□□□ -0.32
VDAC3P1-201ENST00000604654 CABP4P57796 275 aa13.03□□□□□ -0.32
VDAC3P1-201ENST00000604654 NKX1-1Q15270 411 aaPredicted RBP13.03□□□□□ -0.32
VDAC3P1-201ENST00000604654 STK32BQ9NY57 414 aa13.03□□□□□ -0.32
VDAC3P1-201ENST00000604654 PALLDQ8WX93 1383 aa13.03□□□□□ -0.32
VDAC3P1-201ENST00000604654 UBR3Q6ZT12 1888 aa13.02□□□□□ -0.32
VDAC3P1-201ENST00000604654 FCHSD2O94868 740 aa13.02□□□□□ -0.33
VDAC3P1-201ENST00000604654 PRKAR2BP31323 418 aa13.02□□□□□ -0.33
VDAC3P1-201ENST00000604654 TXNRD1Q16881 649 aa13.02□□□□□ -0.33
VDAC3P1-201ENST00000604654 RTF1Q92541 710 aaKnown RBP13.02□□□□□ -0.33
VDAC3P1-201ENST00000604654 PRKRIP1Q9H875 184 aaPredicted RBP13.02□□□□□ -0.33
VDAC3P1-201ENST00000604654 LAMB4A4D0S4 1761 aa13.02□□□□□ -0.33
VDAC3P1-201ENST00000604654 KDM6AO15550 1401 aaPredicted RBP13.01□□□□□ -0.33
VDAC3P1-201ENST00000604654 TJP1Q07157 1748 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms