RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 HSPA6P17066 643 aa16.82■□□□□ 0.28
PDLIM1P1-201ENST00000604187 TMC1Q8TDI8 760 aa16.82■□□□□ 0.28
PDLIM1P1-201ENST00000604187 HDGFL2Q7Z4V5 671 aaPredicted RBP16.81■□□□□ 0.28
PDLIM1P1-201ENST00000604187 IP6K1Q92551 441 aa16.81■□□□□ 0.28
PDLIM1P1-201ENST00000604187 ADCY9O60503 1353 aa16.8■□□□□ 0.28
PDLIM1P1-201ENST00000604187 EDC4Q6P2E9 1401 aaKnown RBP16.79■□□□□ 0.28
PDLIM1P1-201ENST00000604187 COL24A1Q17RW2 1714 aa16.79■□□□□ 0.28
PDLIM1P1-201ENST00000604187 CD2APQ9Y5K6 639 aa16.79■□□□□ 0.28
PDLIM1P1-201ENST00000604187 QSER1Q2KHR3 1735 aa16.79■□□□□ 0.28
PDLIM1P1-201ENST00000604187 MON2Q7Z3U7 1717 aa16.79■□□□□ 0.28
PDLIM1P1-201ENST00000604187 USP47Q96K76 1375 aa16.78■□□□□ 0.28
PDLIM1P1-201ENST00000604187 ZCRB1Q8TBF4 217 aaKnown RBP16.78■□□□□ 0.28
PDLIM1P1-201ENST00000604187 SLC12A5Q9H2X9 1139 aa16.78■□□□□ 0.28
PDLIM1P1-201ENST00000604187 USP54Q70EL1 1684 aa16.78■□□□□ 0.28
PDLIM1P1-201ENST00000604187 A0A1W2PP64 1363 aa16.77■□□□□ 0.27
PDLIM1P1-201ENST00000604187 MEGF6O75095 1541 aa16.76■□□□□ 0.27
PDLIM1P1-201ENST00000604187 TERF2IPQ9NYB0 399 aa16.76■□□□□ 0.27
PDLIM1P1-201ENST00000604187 MAP3K19Q56UN5 1328 aa16.75■□□□□ 0.27
PDLIM1P1-201ENST00000604187 WWC3Q9ULE0 1092 aa16.75■□□□□ 0.27
PDLIM1P1-201ENST00000604187 HOXC9P31274 260 aa16.74■□□□□ 0.27
PDLIM1P1-201ENST00000604187 TUBGCP6Q96RT7 1819 aa16.74■□□□□ 0.27
PDLIM1P1-201ENST00000604187 LTN1O94822 1766 aa16.74■□□□□ 0.27
PDLIM1P1-201ENST00000604187 DOT1LQ8TEK3 1739 aa16.73■□□□□ 0.27
PDLIM1P1-201ENST00000604187 MAPK8IP2Q13387 824 aaPredicted RBP16.73■□□□□ 0.27
PDLIM1P1-201ENST00000604187 SIN3AQ96ST3 1273 aa16.73■□□□□ 0.27
PDLIM1P1-201ENST00000604187 AMPHP49418 695 aa16.72■□□□□ 0.27
PDLIM1P1-201ENST00000604187 FLAD1Q8NFF5 587 aa16.72■□□□□ 0.27
PDLIM1P1-201ENST00000604187 IGSF1Q8N6C5 1336 aa16.71■□□□□ 0.27
PDLIM1P1-201ENST00000604187 FBLN1P23142 703 aa16.71■□□□□ 0.27
PDLIM1P1-201ENST00000604187 NEUROD1Q13562 356 aa16.71■□□□□ 0.27
PDLIM1P1-201ENST00000604187 USHBP1Q8N6Y0 703 aa16.71■□□□□ 0.27
PDLIM1P1-201ENST00000604187 COG3Q96JB2 828 aa16.71■□□□□ 0.27
PDLIM1P1-201ENST00000604187 PALLDQ8WX93 1383 aa16.71■□□□□ 0.27
PDLIM1P1-201ENST00000604187 CARD11Q9BXL7 1154 aa16.7■□□□□ 0.26
PDLIM1P1-201ENST00000604187 LY75O60449 1722 aa16.7■□□□□ 0.26
PDLIM1P1-201ENST00000604187 KIF3CO14782 793 aa16.69■□□□□ 0.26
PDLIM1P1-201ENST00000604187 NBPF6Q5VWK0 638 aa16.69■□□□□ 0.26
PDLIM1P1-201ENST00000604187 AMIGO3Q86WK7 504 aa16.69■□□□□ 0.26
PDLIM1P1-201ENST00000604187 RAPGEF4Q8WZA2 1011 aa16.69■□□□□ 0.26
PDLIM1P1-201ENST00000604187 AK7Q96M32 723 aa16.69■□□□□ 0.26
PDLIM1P1-201ENST00000604187 NBPF4Q96M43 638 aa16.69■□□□□ 0.26
PDLIM1P1-201ENST00000604187 FAM208AQ9UK61 1670 aaKnown RBP16.69■□□□□ 0.26
PDLIM1P1-201ENST00000604187 PHF14O94880 888 aa16.68■□□□□ 0.26
PDLIM1P1-201ENST00000604187 CGNL1Q0VF96 1302 aa16.68■□□□□ 0.26
PDLIM1P1-201ENST00000604187 RTL1A6NKG5 1358 aa16.67■□□□□ 0.26
PDLIM1P1-201ENST00000604187 MPRIPQ6WCQ1 1025 aa16.67■□□□□ 0.26
PDLIM1P1-201ENST00000604187 HMGB2P26583 209 aaKnown RBP16.66■□□□□ 0.26
PDLIM1P1-201ENST00000604187 SMIM5Q71RC9 77 aa16.66■□□□□ 0.26
PDLIM1P1-201ENST00000604187 PCDH11XQ9BZA7 1347 aa16.66■□□□□ 0.26
PDLIM1P1-201ENST00000604187 PCDH11YQ9BZA8 1340 aa16.66■□□□□ 0.26
PDLIM1P1-201ENST00000604187 KAT6BQ8WYB5 2073 aa16.65■□□□□ 0.26
PDLIM1P1-201ENST00000604187 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.65■□□□□ 0.26
PDLIM1P1-201ENST00000604187 TATP17735 454 aaPredicted RBP16.65■□□□□ 0.26
PDLIM1P1-201ENST00000604187 APLP1P51693 650 aa16.65■□□□□ 0.26
PDLIM1P1-201ENST00000604187 RRS1Q15050 365 aaKnown RBP16.65■□□□□ 0.26
PDLIM1P1-201ENST00000604187 SMG6Q86US8 1419 aaKnown RBP16.64■□□□□ 0.25
PDLIM1P1-201ENST00000604187 PUS7Q96PZ0 661 aaKnown RBP16.64■□□□□ 0.25
PDLIM1P1-201ENST00000604187 SMARCC1Q92922 1105 aaPredicted RBP16.63■□□□□ 0.25
PDLIM1P1-201ENST00000604187 C5P01031 1676 aa16.62■□□□□ 0.25
PDLIM1P1-201ENST00000604187 NSD3Q9BZ95 1437 aa16.62■□□□□ 0.25
PDLIM1P1-201ENST00000604187 CYP27B1O15528 508 aa16.61■□□□□ 0.25
PDLIM1P1-201ENST00000604187 SSFA2P28290 1259 aa16.6■□□□□ 0.25
PDLIM1P1-201ENST00000604187 DNAJC5GQ8N7S2 189 aa16.6■□□□□ 0.25
PDLIM1P1-201ENST00000604187 C4BP0C0L5 1744 aa16.59■□□□□ 0.25
PDLIM1P1-201ENST00000604187 TOMM70O94826 608 aa16.59■□□□□ 0.25
PDLIM1P1-201ENST00000604187 LINC00116Q8NCU8 138 aa16.59■□□□□ 0.25
PDLIM1P1-201ENST00000604187 PIGBQ92521 554 aa16.59■□□□□ 0.25
PDLIM1P1-201ENST00000604187 GGNBP2Q9H3C7 697 aa16.59■□□□□ 0.25
PDLIM1P1-201ENST00000604187 GNPATO15228 680 aa16.58■□□□□ 0.24
PDLIM1P1-201ENST00000604187 MMP10P09238 476 aa16.58■□□□□ 0.24
PDLIM1P1-201ENST00000604187 HSP90AB2PQ58FF8 381 aa16.58■□□□□ 0.24
PDLIM1P1-201ENST00000604187 PXDNLA1KZ92 1463 aa16.58■□□□□ 0.24
PDLIM1P1-201ENST00000604187 CICQ96RK0 1608 aaPredicted RBP16.58■□□□□ 0.24
PDLIM1P1-201ENST00000604187 INSRP06213 1382 aa16.57■□□□□ 0.24
PDLIM1P1-201ENST00000604187 LOC102724428A0A0B4J2F2 783 aa16.57■□□□□ 0.24
PDLIM1P1-201ENST00000604187 SIK1P57059 783 aa16.57■□□□□ 0.24
PDLIM1P1-201ENST00000604187 TESK2Q96S53 571 aa16.57■□□□□ 0.24
PDLIM1P1-201ENST00000604187 NMRK2Q9NPI5 230 aa16.57■□□□□ 0.24
PDLIM1P1-201ENST00000604187 TOGARAM1Q9Y4F4 1720 aa16.56■□□□□ 0.24
PDLIM1P1-201ENST00000604187 FYB1O15117 783 aa16.56■□□□□ 0.24
PDLIM1P1-201ENST00000604187 BCS1LQ9Y276 419 aa16.56■□□□□ 0.24
PDLIM1P1-201ENST00000604187 FLT4P35916 1363 aa16.55■□□□□ 0.24
PDLIM1P1-201ENST00000604187 A0A0G2JLW4 131 aa16.54■□□□□ 0.24
PDLIM1P1-201ENST00000604187 ITPK1Q13572 414 aa16.54■□□□□ 0.24
PDLIM1P1-201ENST00000604187 ARHGAP27Q6ZUM4 889 aa16.54■□□□□ 0.24
PDLIM1P1-201ENST00000604187 ST20-MTHFSA0A0A6YYL1 179 aa16.53■□□□□ 0.24
PDLIM1P1-201ENST00000604187 HTRA3P83110 453 aa16.53■□□□□ 0.24
PDLIM1P1-201ENST00000604187 NCBP3Q53F19 620 aaKnown RBP16.53■□□□□ 0.24
PDLIM1P1-201ENST00000604187 TMOD3Q9NYL9 352 aa16.53■□□□□ 0.24
PDLIM1P1-201ENST00000604187 RGPD2P0DJD1 1756 aa16.53■□□□□ 0.24
PDLIM1P1-201ENST00000604187 TGFB2P61812 414 aa16.52■□□□□ 0.24
PDLIM1P1-201ENST00000604187 NKX1-1Q15270 411 aaPredicted RBP16.52■□□□□ 0.24
PDLIM1P1-201ENST00000604187 COL13A1Q5TAT6 717 aaPredicted RBP16.52■□□□□ 0.24
PDLIM1P1-201ENST00000604187 ASAP1Q9ULH1 1129 aa16.52■□□□□ 0.24
PDLIM1P1-201ENST00000604187 C10orf71Q711Q0 1435 aa16.52■□□□□ 0.23
PDLIM1P1-201ENST00000604187 CAPN15O75808 1086 aa16.51■□□□□ 0.23
PDLIM1P1-201ENST00000604187 ATP6V1AP38606 617 aa16.51■□□□□ 0.23
PDLIM1P1-201ENST00000604187 RBM46Q8TBY0 533 aaKnown RBP16.51■□□□□ 0.23
PDLIM1P1-201ENST00000604187 SPG7Q9UQ90 795 aa16.51■□□□□ 0.23
PDLIM1P1-201ENST00000604187 KIF24Q5T7B8 1368 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms