RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 TNNT2P45379 298 aaPredicted RBP22.55■■□□□ 1.2
TUBE1-206ENST00000603722 SYTL4Q96C24 671 aaPredicted RBP22.55■■□□□ 1.2
TUBE1-206ENST00000603722 TATP17735 454 aaPredicted RBP22.54■■□□□ 1.2
TUBE1-206ENST00000603722 STK32BQ9NY57 414 aa22.54■■□□□ 1.2
TUBE1-206ENST00000603722 RGPD2P0DJD1 1756 aa22.53■■□□□ 1.2
TUBE1-206ENST00000603722 POLKQ9UBT6 870 aa22.53■■□□□ 1.2
TUBE1-206ENST00000603722 WASHC2AQ641Q2 1341 aa22.53■■□□□ 1.2
TUBE1-206ENST00000603722 PRIM1P49642 420 aaKnown RBP22.52■■□□□ 1.2
TUBE1-206ENST00000603722 PDGFDQ9GZP0 370 aaPredicted RBP22.51■■□□□ 1.19
TUBE1-206ENST00000603722 SPON1Q9HCB6 807 aa22.51■■□□□ 1.19
TUBE1-206ENST00000603722 SLC15A2Q16348 729 aa22.5■■□□□ 1.19
TUBE1-206ENST00000603722 NSD2O96028 1365 aa22.5■■□□□ 1.19
TUBE1-206ENST00000603722 SHANK3Q9BYB0 1731 aa22.49■■□□□ 1.19
TUBE1-206ENST00000603722 ANKRD26Q9UPS8 1709 aa22.49■■□□□ 1.19
TUBE1-206ENST00000603722 PCDH11XQ9BZA7 1347 aa22.49■■□□□ 1.19
TUBE1-206ENST00000603722 PCDH11YQ9BZA8 1340 aa22.49■■□□□ 1.19
TUBE1-206ENST00000603722 NCAPD2Q15021 1401 aa22.48■■□□□ 1.19
TUBE1-206ENST00000603722 BTAF1O14981 1849 aa22.48■■□□□ 1.19
TUBE1-206ENST00000603722 LRRC4BQ9NT99 713 aa22.48■■□□□ 1.19
TUBE1-206ENST00000603722 KIF7Q2M1P5 1343 aa22.48■■□□□ 1.19
TUBE1-206ENST00000603722 EYA1Q99502 592 aa22.47■■□□□ 1.19
TUBE1-206ENST00000603722 DOT1LQ8TEK3 1739 aa22.47■■□□□ 1.19
TUBE1-206ENST00000603722 ZBTB7AO95365 584 aa22.46■■□□□ 1.19
TUBE1-206ENST00000603722 PPP1R1BQ9UD71 204 aaPredicted RBP22.46■■□□□ 1.19
TUBE1-206ENST00000603722 PAPPAQ13219 1627 aa22.46■■□□□ 1.19
TUBE1-206ENST00000603722 EIF4A2Q14240 407 aaKnown RBP22.45■■□□□ 1.18
TUBE1-206ENST00000603722 CASZ1Q86V15 1759 aa22.45■■□□□ 1.18
TUBE1-206ENST00000603722 CYP27B1O15528 508 aa22.44■■□□□ 1.18
TUBE1-206ENST00000603722 ZNF827Q17R98 1081 aa22.44■■□□□ 1.18
TUBE1-206ENST00000603722 SLC27A3Q5K4L6 730 aa22.44■■□□□ 1.18
TUBE1-206ENST00000603722 MORC1Q86VD1 984 aa22.44■■□□□ 1.18
TUBE1-206ENST00000603722 KNSTRNQ9Y448 316 aa22.44■■□□□ 1.18
TUBE1-206ENST00000603722 KCNQ4P56696 695 aa22.42■■□□□ 1.18
TUBE1-206ENST00000603722 SPG7Q9UQ90 795 aa22.4■■□□□ 1.18
TUBE1-206ENST00000603722 ATF5Q9Y2D1 282 aaPredicted RBP22.4■■□□□ 1.18
TUBE1-206ENST00000603722 AKT1S1Q96B36 256 aa22.39■■□□□ 1.17
TUBE1-206ENST00000603722 AMER1Q5JTC6 1135 aaPredicted RBP22.38■■□□□ 1.17
TUBE1-206ENST00000603722 CCNL1Q9UK58 526 aaPredicted RBP22.38■■□□□ 1.17
TUBE1-206ENST00000603722 PKD1L3Q7Z443 1732 aa22.37■■□□□ 1.17
TUBE1-206ENST00000603722 IGSF1Q8N6C5 1336 aa22.37■■□□□ 1.17
TUBE1-206ENST00000603722 PTGER2P43116 358 aa22.37■■□□□ 1.17
TUBE1-206ENST00000603722 MPRIPQ6WCQ1 1025 aa22.37■■□□□ 1.17
TUBE1-206ENST00000603722 MTFR1LQ9H019 292 aa22.37■■□□□ 1.17
TUBE1-206ENST00000603722 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.35■■□□□ 1.17
TUBE1-206ENST00000603722 MAP2P11137 1827 aaKnown RBP22.35■■□□□ 1.17
TUBE1-206ENST00000603722 PALLDQ8WX93 1383 aa22.35■■□□□ 1.17
TUBE1-206ENST00000603722 NKX1-1Q15270 411 aaPredicted RBP22.34■■□□□ 1.17
TUBE1-206ENST00000603722 TFCP2L1Q9NZI6 479 aa22.34■■□□□ 1.17
TUBE1-206ENST00000603722 PHKG2P15735 406 aa22.33■■□□□ 1.17
TUBE1-206ENST00000603722 PNPLA7Q6ZV29 1317 aa22.32■■□□□ 1.16
TUBE1-206ENST00000603722 TOGARAM1Q9Y4F4 1720 aa22.32■■□□□ 1.16
TUBE1-206ENST00000603722 IFNL2Q8IZJ0 200 aa22.32■■□□□ 1.16
TUBE1-206ENST00000603722 LY75O60449 1722 aa22.31■■□□□ 1.16
TUBE1-206ENST00000603722 PLEKHG2Q9H7P9 1386 aa22.31■■□□□ 1.16
TUBE1-206ENST00000603722 PIGBQ92521 554 aa22.31■■□□□ 1.16
TUBE1-206ENST00000603722 PER1O15534 1290 aaPredicted RBP22.3■■□□□ 1.16
TUBE1-206ENST00000603722 SGIP1Q9BQI5 828 aa22.3■■□□□ 1.16
TUBE1-206ENST00000603722 CC2D1BQ5T0F9 858 aaKnown RBP22.29■■□□□ 1.16
TUBE1-206ENST00000603722 AEBP1Q8IUX7 1158 aa22.29■■□□□ 1.16
TUBE1-206ENST00000603722 SMARCC1Q92922 1105 aaPredicted RBP22.28■■□□□ 1.16
TUBE1-206ENST00000603722 TMOD3Q9NYL9 352 aa22.28■■□□□ 1.16
TUBE1-206ENST00000603722 IL13P35225 146 aa22.26■■□□□ 1.15
TUBE1-206ENST00000603722 CNGB1Q14028 1251 aaPredicted RBP22.26■■□□□ 1.15
TUBE1-206ENST00000603722 PLEKHO1Q53GL0 409 aaPredicted RBP22.26■■□□□ 1.15
TUBE1-206ENST00000603722 SULT6B1Q6IMI4 303 aa22.26■■□□□ 1.15
TUBE1-206ENST00000603722 ARXQ96QS3 562 aa22.26■■□□□ 1.15
TUBE1-206ENST00000603722 FHDC1Q9C0D6 1143 aaPredicted RBP22.26■■□□□ 1.15
TUBE1-206ENST00000603722 MTHFSP49914 203 aa22.25■■□□□ 1.15
TUBE1-206ENST00000603722 SLC16A10Q8TF71 515 aa22.25■■□□□ 1.15
TUBE1-206ENST00000603722 KAT6BQ8WYB5 2073 aa22.24■■□□□ 1.15
TUBE1-206ENST00000603722 MSH5O43196 834 aa22.24■■□□□ 1.15
TUBE1-206ENST00000603722 AMOTQ4VCS5 1084 aa22.24■■□□□ 1.15
TUBE1-206ENST00000603722 ZNF530Q6P9A1 599 aaPredicted RBP22.24■■□□□ 1.15
TUBE1-206ENST00000603722 KDRP35968 1356 aa22.23■■□□□ 1.15
TUBE1-206ENST00000603722 HSP90AB1P08238 724 aaKnown RBP22.22■■□□□ 1.15
TUBE1-206ENST00000603722 COL23A1Q86Y22 540 aaPredicted RBP22.22■■□□□ 1.15
TUBE1-206ENST00000603722 SYT17Q9BSW7 474 aa22.22■■□□□ 1.15
TUBE1-206ENST00000603722 ASAP1Q9ULH1 1129 aa22.22■■□□□ 1.15
TUBE1-206ENST00000603722 QSER1Q2KHR3 1735 aa22.21■■□□□ 1.15
TUBE1-206ENST00000603722 LOC102724428A0A0B4J2F2 783 aa22.21■■□□□ 1.15
TUBE1-206ENST00000603722 DCAF8L1A6NGE4 600 aa22.21■■□□□ 1.15
TUBE1-206ENST00000603722 POLD1P28340 1107 aa22.21■■□□□ 1.15
TUBE1-206ENST00000603722 SIK1P57059 783 aa22.21■■□□□ 1.15
TUBE1-206ENST00000603722 DCAF5Q96JK2 942 aa22.21■■□□□ 1.15
TUBE1-206ENST00000603722 C5P01031 1676 aa22.2■■□□□ 1.15
TUBE1-206ENST00000603722 HMGB2P26583 209 aaKnown RBP22.2■■□□□ 1.14
TUBE1-206ENST00000603722 AK7Q96M32 723 aa22.2■■□□□ 1.14
TUBE1-206ENST00000603722 NPC1L1Q9UHC9 1359 aa22.2■■□□□ 1.14
TUBE1-206ENST00000603722 KDM6AO15550 1401 aaPredicted RBP22.2■■□□□ 1.14
TUBE1-206ENST00000603722 C1orf141Q5JVX7 400 aa22.19■■□□□ 1.14
TUBE1-206ENST00000603722 ATG3Q9NT62 314 aa22.19■■□□□ 1.14
TUBE1-206ENST00000603722 TUBGCP6Q96RT7 1819 aa22.19■■□□□ 1.14
TUBE1-206ENST00000603722 ERVV-2B6SEH9 535 aa22.18■■□□□ 1.14
TUBE1-206ENST00000603722 ITGB4P16144 1822 aa22.17■■□□□ 1.14
TUBE1-206ENST00000603722 MSL1Q68DK7 614 aa22.17■■□□□ 1.14
TUBE1-206ENST00000603722 KLHL34Q8N239 644 aa22.17■■□□□ 1.14
TUBE1-206ENST00000603722 LINC00116Q8NCU8 138 aa22.17■■□□□ 1.14
TUBE1-206ENST00000603722 MAP3K5Q99683 1374 aa22.16■■□□□ 1.14
TUBE1-206ENST00000603722 DIAPH1O60610 1272 aaKnown RBP22.16■■□□□ 1.14
TUBE1-206ENST00000603722 HMOX1P09601 288 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 231.5 ms