RNA–Protein interactions for RNA: ENST00000603380.5

ZNF559-213, Transcript of zinc finger protein 559, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF559, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559-213ENST00000603380 FOXD4L3Q6VB84 417 aaPredicted RBP13.47□□□□□ -0.25
ZNF559-213ENST00000603380 TMEM87AQ8NBN3 555 aa13.46□□□□□ -0.25
ZNF559-213ENST00000603380 NSD3Q9BZ95 1437 aa13.46□□□□□ -0.25
ZNF559-213ENST00000603380 U2AF1L5P0DN76 240 aaPredicted RBP13.46□□□□□ -0.25
ZNF559-213ENST00000603380 PTGS1P23219 599 aa13.46□□□□□ -0.25
ZNF559-213ENST00000603380 U2AF1Q01081 240 aaKnown RBP eCLIP13.46□□□□□ -0.25
ZNF559-213ENST00000603380 PAXBP1Q9Y5B6 917 aa13.46□□□□□ -0.25
ZNF559-213ENST00000603380 SPHKAPQ2M3C7 1700 aa13.46□□□□□ -0.26
ZNF559-213ENST00000603380 TNNT1P13805 278 aa13.45□□□□□ -0.26
ZNF559-213ENST00000603380 ALDH1L2Q3SY69 923 aa13.45□□□□□ -0.26
ZNF559-213ENST00000603380 CCDC112Q8NEF3 446 aa13.45□□□□□ -0.26
ZNF559-213ENST00000603380 IFT140Q96RY7 1462 aa13.45□□□□□ -0.26
ZNF559-213ENST00000603380 GOLGA6L6A8MZA4 724 aa13.45□□□□□ -0.26
ZNF559-213ENST00000603380 RAD51AP2Q09MP3 1159 aa13.45□□□□□ -0.26
ZNF559-213ENST00000603380 ZBTB9Q96C00 473 aa13.45□□□□□ -0.26
ZNF559-213ENST00000603380 KIF1BPQ96EK5 621 aa13.45□□□□□ -0.26
ZNF559-213ENST00000603380 NEK4P51957 841 aa13.44□□□□□ -0.26
ZNF559-213ENST00000603380 INTS4Q96HW7 963 aaKnown RBP13.44□□□□□ -0.26
ZNF559-213ENST00000603380 CFAP53Q96M91 514 aa13.44□□□□□ -0.26
ZNF559-213ENST00000603380 YY1AP1Q9H869 796 aa13.44□□□□□ -0.26
ZNF559-213ENST00000603380 EFCC1Q9HA90 598 aa13.44□□□□□ -0.26
ZNF559-213ENST00000603380 IL16Q14005 1332 aa13.44□□□□□ -0.26
ZNF559-213ENST00000603380 PIK3R4Q99570 1358 aa13.44□□□□□ -0.26
ZNF559-213ENST00000603380 SDSP20132 328 aa13.44□□□□□ -0.26
ZNF559-213ENST00000603380 TMPOP42166 694 aaKnown RBP13.44□□□□□ -0.26
ZNF559-213ENST00000603380 C16orf71Q8IYS4 520 aaPredicted RBP13.44□□□□□ -0.26
ZNF559-213ENST00000603380 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.43□□□□□ -0.26
ZNF559-213ENST00000603380 BRPF1P55201 1214 aaPredicted RBP13.43□□□□□ -0.26
ZNF559-213ENST00000603380 FBXO38Q6PIJ6 1188 aa13.43□□□□□ -0.26
ZNF559-213ENST00000603380 LRMPQ12912 555 aa13.43□□□□□ -0.26
ZNF559-213ENST00000603380 PLEKHF1Q96S99 279 aa13.43□□□□□ -0.26
ZNF559-213ENST00000603380 SPAG9O60271 1321 aaKnown RBP13.43□□□□□ -0.26
ZNF559-213ENST00000603380 RPAP1Q9BWH6 1393 aaPredicted RBP13.42□□□□□ -0.26
ZNF559-213ENST00000603380 REC8O95072 547 aa13.42□□□□□ -0.26
ZNF559-213ENST00000603380 MCM2P49736 904 aa13.42□□□□□ -0.26
ZNF559-213ENST00000603380 GIMAP6Q6P9H5 292 aa13.42□□□□□ -0.26
ZNF559-213ENST00000603380 ZNF446Q9NWS9 450 aa13.42□□□□□ -0.26
ZNF559-213ENST00000603380 PTPRTO14522 1441 aa13.42□□□□□ -0.26
ZNF559-213ENST00000603380 KLHL34Q8N239 644 aa13.42□□□□□ -0.26
ZNF559-213ENST00000603380 OTUD7AQ8TE49 926 aaPredicted RBP13.42□□□□□ -0.26
ZNF559-213ENST00000603380 NOL10Q9BSC4 688 aaKnown RBP13.42□□□□□ -0.26
ZNF559-213ENST00000603380 IFT57Q9NWB7 429 aa13.42□□□□□ -0.26
ZNF559-213ENST00000603380 GEMIN8Q9NWZ8 242 aaKnown RBP13.41□□□□□ -0.26
ZNF559-213ENST00000603380 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.41□□□□□ -0.26
ZNF559-213ENST00000603380 ZNF215Q9UL58 517 aaPredicted RBP13.41□□□□□ -0.26
ZNF559-213ENST00000603380 MAGI1Q96QZ7 1491 aaPredicted RBP13.41□□□□□ -0.26
ZNF559-213ENST00000603380 MMP14P50281 582 aa13.41□□□□□ -0.26
ZNF559-213ENST00000603380 SLFNL1Q499Z3 407 aa13.41□□□□□ -0.26
ZNF559-213ENST00000603380 SOX12O15370 315 aa13.41□□□□□ -0.26
ZNF559-213ENST00000603380 CCDC186Q7Z3E2 898 aa13.41□□□□□ -0.26
ZNF559-213ENST00000603380 NFATC2IPQ8NCF5 419 aa13.41□□□□□ -0.26
ZNF559-213ENST00000603380 SRCIN1Q9C0H9 1055 aa13.41□□□□□ -0.26
ZNF559-213ENST00000603380 DCTPP1Q9H773 170 aa13.41□□□□□ -0.26
ZNF559-213ENST00000603380 CNPY2Q9Y2B0 182 aa13.41□□□□□ -0.26
ZNF559-213ENST00000603380 WDR33Q9C0J8 1336 aaKnown RBP13.4□□□□□ -0.26
ZNF559-213ENST00000603380 MYOM2P54296 1465 aa13.4□□□□□ -0.26
ZNF559-213ENST00000603380 U2SURPO15042 1029 aaKnown RBP13.4□□□□□ -0.26
ZNF559-213ENST00000603380 NOP2P46087 812 aaKnown RBP13.4□□□□□ -0.26
ZNF559-213ENST00000603380 UBE2HP62256 183 aa13.4□□□□□ -0.26
ZNF559-213ENST00000603380 CASC1Q6TDU7 716 aa13.4□□□□□ -0.26
ZNF559-213ENST00000603380 SAMD9LQ8IVG5 1584 aa13.4□□□□□ -0.26
ZNF559-213ENST00000603380 ERBB3P21860 1342 aa13.4□□□□□ -0.26
ZNF559-213ENST00000603380 ERC2O15083 957 aa13.4□□□□□ -0.26
ZNF559-213ENST00000603380 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.4□□□□□ -0.26
ZNF559-213ENST00000603380 V9GYY5 206 aaPredicted RBP13.4□□□□□ -0.26
ZNF559-213ENST00000603380 PTCH1Q13635 1447 aa13.4□□□□□ -0.26
ZNF559-213ENST00000603380 PLEKHD1A6NEE1 506 aa13.39□□□□□ -0.27
ZNF559-213ENST00000603380 CHMP4CQ96CF2 233 aa13.39□□□□□ -0.27
ZNF559-213ENST00000603380 RSPH14Q9UHP6 348 aa13.39□□□□□ -0.27
ZNF559-213ENST00000603380 KIAA1210Q9ULL0 1709 aa13.39□□□□□ -0.27
ZNF559-213ENST00000603380 RTL1A6NKG5 1358 aa13.39□□□□□ -0.27
ZNF559-213ENST00000603380 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.39□□□□□ -0.27
ZNF559-213ENST00000603380 ELF2Q15723 593 aa13.38□□□□□ -0.27
ZNF559-213ENST00000603380 ZSCAN25Q6NSZ9 544 aa13.38□□□□□ -0.27
ZNF559-213ENST00000603380 ARHGAP45Q92619 1136 aa13.38□□□□□ -0.27
ZNF559-213ENST00000603380 NRBP1Q9UHY1 535 aa13.38□□□□□ -0.27
ZNF559-213ENST00000603380 KNDC1Q76NI1 1749 aa13.38□□□□□ -0.27
ZNF559-213ENST00000603380 MAST1Q9Y2H9 1570 aa13.38□□□□□ -0.27
ZNF559-213ENST00000603380 TPRNQ4KMQ1 711 aa13.38□□□□□ -0.27
ZNF559-213ENST00000603380 CEP135Q66GS9 1140 aa13.38□□□□□ -0.27
ZNF559-213ENST00000603380 TRAPPC8Q9Y2L5 1435 aa13.38□□□□□ -0.27
ZNF559-213ENST00000603380 RTF1Q92541 710 aaKnown RBP13.38□□□□□ -0.27
ZNF559-213ENST00000603380 SLC12A5Q9H2X9 1139 aa13.38□□□□□ -0.27
ZNF559-213ENST00000603380 RNF216Q9NWF9 866 aaPredicted RBP13.38□□□□□ -0.27
ZNF559-213ENST00000603380 ABCC4O15439 1325 aa13.37□□□□□ -0.27
ZNF559-213ENST00000603380 MRPL50Q8N5N7 158 aaKnown RBP13.37□□□□□ -0.27
ZNF559-213ENST00000603380 TNNT3P45378 269 aaPredicted RBP13.37□□□□□ -0.27
ZNF559-213ENST00000603380 TPD52L1Q16890 204 aaPredicted RBP13.37□□□□□ -0.27
ZNF559-213ENST00000603380 MUM1L1Q5H9M0 696 aa13.37□□□□□ -0.27
ZNF559-213ENST00000603380 NOL8Q76FK4 1167 aaKnown RBP13.37□□□□□ -0.27
ZNF559-213ENST00000603380 USP32Q8NFA0 1604 aa13.36□□□□□ -0.27
ZNF559-213ENST00000603380 PSEN1P49768 467 aa13.36□□□□□ -0.27
ZNF559-213ENST00000603380 ERO1AQ96HE7 468 aa13.36□□□□□ -0.27
ZNF559-213ENST00000603380 RASSF4Q9H2L5 321 aa13.36□□□□□ -0.27
ZNF559-213ENST00000603380 FHOD1Q9Y613 1164 aa13.36□□□□□ -0.27
ZNF559-213ENST00000603380 SBNO2Q9Y2G9 1366 aa13.36□□□□□ -0.27
ZNF559-213ENST00000603380 DHX16O60231 1041 aaKnown RBP13.36□□□□□ -0.27
ZNF559-213ENST00000603380 SRPK2P78362 688 aaKnown RBP13.36□□□□□ -0.27
ZNF559-213ENST00000603380 BMS1Q14692 1282 aaKnown RBP13.36□□□□□ -0.27
ZNF559-213ENST00000603380 ZNF592Q92610 1267 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms