RNA–Protein interactions for RNA: ENST00000603334.1

DDX55P1-201, Transcript of DEAD-box helicase 55 pseudogene 1, humanhuman

BASIC

Gene DDX55P1, Length 1,414 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55P1-201ENST00000603334 FAM208AQ9UK61 1670 aaKnown RBP13.68□□□□□ -0.22
DDX55P1-201ENST00000603334 INSRP06213 1382 aa13.67□□□□□ -0.22
DDX55P1-201ENST00000603334 ANKRD24Q8TF21 1146 aa13.67□□□□□ -0.22
DDX55P1-201ENST00000603334 ADAMTS8Q9UP79 889 aa13.67□□□□□ -0.22
DDX55P1-201ENST00000603334 NUP188Q5SRE5 1749 aa13.67□□□□□ -0.22
DDX55P1-201ENST00000603334 FBLN1P23142 703 aa13.66□□□□□ -0.22
DDX55P1-201ENST00000603334 RRS1Q15050 365 aaKnown RBP13.66□□□□□ -0.22
DDX55P1-201ENST00000603334 SALL2Q9Y467 1007 aaPredicted RBP13.66□□□□□ -0.22
DDX55P1-201ENST00000603334 SMG6Q86US8 1419 aaKnown RBP13.66□□□□□ -0.22
DDX55P1-201ENST00000603334 NUDCQ9Y266 331 aa13.65□□□□□ -0.22
DDX55P1-201ENST00000603334 FAM196AQ6ZSG2 479 aa13.64□□□□□ -0.23
DDX55P1-201ENST00000603334 POLKQ9UBT6 870 aa13.64□□□□□ -0.23
DDX55P1-201ENST00000603334 RGPD3A6NKT7 1758 aaPredicted RBP13.64□□□□□ -0.23
DDX55P1-201ENST00000603334 RGPD4Q7Z3J3 1758 aa13.64□□□□□ -0.23
DDX55P1-201ENST00000603334 SHANK3Q9BYB0 1731 aa13.64□□□□□ -0.23
DDX55P1-201ENST00000603334 U2SURPO15042 1029 aaKnown RBP13.64□□□□□ -0.23
DDX55P1-201ENST00000603334 TRIM37O94972 964 aa13.64□□□□□ -0.23
DDX55P1-201ENST00000603334 EN1Q05925 392 aaPredicted RBP13.64□□□□□ -0.23
DDX55P1-201ENST00000603334 NLRP2Q9NX02 1062 aa13.64□□□□□ -0.23
DDX55P1-201ENST00000603334 ZBED9Q6R2W3 1325 aa13.63□□□□□ -0.23
DDX55P1-201ENST00000603334 SF3B2Q13435 895 aaKnown RBP13.63□□□□□ -0.23
DDX55P1-201ENST00000603334 CCDC146Q8IYE0 955 aa13.63□□□□□ -0.23
DDX55P1-201ENST00000603334 OVOS2A0A0G2JMS6 1433 aa13.63□□□□□ -0.23
DDX55P1-201ENST00000603334 BCL9O00512 1426 aa13.63□□□□□ -0.23
DDX55P1-201ENST00000603334 DIAPH1O60610 1272 aaKnown RBP13.62□□□□□ -0.23
DDX55P1-201ENST00000603334 U2AF1L5P0DN76 240 aaPredicted RBP13.62□□□□□ -0.23
DDX55P1-201ENST00000603334 BAG6P46379 1132 aa13.62□□□□□ -0.23
DDX55P1-201ENST00000603334 U2AF1Q01081 240 aaKnown RBP eCLIP13.62□□□□□ -0.23
DDX55P1-201ENST00000603334 PDE3BQ13370 1112 aa13.62□□□□□ -0.23
DDX55P1-201ENST00000603334 HSP90AB2PQ58FF8 381 aa13.62□□□□□ -0.23
DDX55P1-201ENST00000603334 MARCH10Q8NA82 808 aaPredicted RBP13.62□□□□□ -0.23
DDX55P1-201ENST00000603334 CAMKK2Q96RR4 588 aa13.62□□□□□ -0.23
DDX55P1-201ENST00000603334 EMILIN1Q9Y6C2 1016 aa13.62□□□□□ -0.23
DDX55P1-201ENST00000603334 TNS2Q63HR2 1409 aa13.62□□□□□ -0.23
DDX55P1-201ENST00000603334 EZH2Q15910 746 aaKnown RBP13.61□□□□□ -0.23
DDX55P1-201ENST00000603334 PTF1AQ7RTS3 328 aa13.61□□□□□ -0.23
DDX55P1-201ENST00000603334 NHSQ6T4R5 1651 aa13.6□□□□□ -0.23
DDX55P1-201ENST00000603334 IL2RBP14784 551 aa13.6□□□□□ -0.23
DDX55P1-201ENST00000603334 DDB1Q16531 1140 aa13.6□□□□□ -0.23
DDX55P1-201ENST00000603334 PLEKHG2Q9H7P9 1386 aa13.6□□□□□ -0.23
DDX55P1-201ENST00000603334 LRP5O75197 1615 aa13.59□□□□□ -0.23
DDX55P1-201ENST00000603334 EXOC5O00471 708 aa13.59□□□□□ -0.23
DDX55P1-201ENST00000603334 LTV1Q96GA3 475 aaPredicted RBP13.59□□□□□ -0.23
DDX55P1-201ENST00000603334 NBPF6Q5VWK0 638 aa13.57□□□□□ -0.24
DDX55P1-201ENST00000603334 NBPF4Q96M43 638 aa13.57□□□□□ -0.24
DDX55P1-201ENST00000603334 NCAPD2Q15021 1401 aa13.57□□□□□ -0.24
DDX55P1-201ENST00000603334 APAF1O14727 1248 aa13.56□□□□□ -0.24
DDX55P1-201ENST00000603334 APBA3O96018 575 aa13.56□□□□□ -0.24
DDX55P1-201ENST00000603334 RUNDC1Q96C34 613 aa13.56□□□□□ -0.24
DDX55P1-201ENST00000603334 PNNQ9H307 717 aaKnown RBP13.56□□□□□ -0.24
DDX55P1-201ENST00000603334 BTAF1O14981 1849 aa13.56□□□□□ -0.24
DDX55P1-201ENST00000603334 NEFMP07197 916 aa13.56□□□□□ -0.24
DDX55P1-201ENST00000603334 RAPGEF4Q8WZA2 1011 aa13.56□□□□□ -0.24
DDX55P1-201ENST00000603334 MEGF6O75095 1541 aa13.55□□□□□ -0.24
DDX55P1-201ENST00000603334 PSDA5PKW4 1024 aaPredicted RBP13.55□□□□□ -0.24
DDX55P1-201ENST00000603334 EIF4A2Q14240 407 aaKnown RBP13.55□□□□□ -0.24
DDX55P1-201ENST00000603334 NEUROD2Q15784 382 aa13.54□□□□□ -0.24
DDX55P1-201ENST00000603334 DOT1LQ8TEK3 1739 aa13.54□□□□□ -0.24
DDX55P1-201ENST00000603334 EYA1Q99502 592 aa13.54□□□□□ -0.24
DDX55P1-201ENST00000603334 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.54□□□□□ -0.24
DDX55P1-201ENST00000603334 TATP17735 454 aaPredicted RBP13.53□□□□□ -0.24
DDX55P1-201ENST00000603334 BCL11BQ9C0K0 894 aaPredicted RBP13.53□□□□□ -0.24
DDX55P1-201ENST00000603334 IGSF1Q8N6C5 1336 aa13.53□□□□□ -0.24
DDX55P1-201ENST00000603334 MAPK8IP3Q9UPT6 1336 aa13.53□□□□□ -0.24
DDX55P1-201ENST00000603334 PAPPAQ13219 1627 aa13.52□□□□□ -0.24
DDX55P1-201ENST00000603334 KCNQ2O43526 872 aa13.52□□□□□ -0.25
DDX55P1-201ENST00000603334 IL13P35225 146 aa13.52□□□□□ -0.25
DDX55P1-201ENST00000603334 PROM2Q8N271 834 aa13.52□□□□□ -0.25
DDX55P1-201ENST00000603334 ZCRB1Q8TBF4 217 aaKnown RBP13.52□□□□□ -0.25
DDX55P1-201ENST00000603334 COL3A1P02461 1466 aaPredicted RBP13.52□□□□□ -0.25
DDX55P1-201ENST00000603334 PKD1L3Q7Z443 1732 aa13.52□□□□□ -0.25
DDX55P1-201ENST00000603334 CASZ1Q86V15 1759 aa13.52□□□□□ -0.25
DDX55P1-201ENST00000603334 PLSCR1O15162 318 aa13.51□□□□□ -0.25
DDX55P1-201ENST00000603334 HMOX1P09601 288 aa13.51□□□□□ -0.25
DDX55P1-201ENST00000603334 RRP7AQ9Y3A4 280 aaKnown RBP13.51□□□□□ -0.25
DDX55P1-201ENST00000603334 GTF3C3Q9Y5Q9 886 aa13.51□□□□□ -0.25
DDX55P1-201ENST00000603334 FCHSD2O94868 740 aa13.5□□□□□ -0.25
DDX55P1-201ENST00000603334 R3HDM1Q15032 1099 aaKnown RBP13.5□□□□□ -0.25
DDX55P1-201ENST00000603334 NGEFQ8N5V2 710 aa13.49□□□□□ -0.25
DDX55P1-201ENST00000603334 SPG7Q9UQ90 795 aa13.49□□□□□ -0.25
DDX55P1-201ENST00000603334 TOGARAM1Q9Y4F4 1720 aa13.49□□□□□ -0.25
DDX55P1-201ENST00000603334 KDRP35968 1356 aa13.49□□□□□ -0.25
DDX55P1-201ENST00000603334 LY75O60449 1722 aa13.48□□□□□ -0.25
DDX55P1-201ENST00000603334 PRKAR2BP31323 418 aa13.48□□□□□ -0.25
DDX55P1-201ENST00000603334 AMOTQ4VCS5 1084 aa13.48□□□□□ -0.25
DDX55P1-201ENST00000603334 USHBP1Q8N6Y0 703 aa13.48□□□□□ -0.25
DDX55P1-201ENST00000603334 PCDH11XQ9BZA7 1347 aa13.48□□□□□ -0.25
DDX55P1-201ENST00000603334 PCDH11YQ9BZA8 1340 aa13.48□□□□□ -0.25
DDX55P1-201ENST00000603334 KAT6BQ8WYB5 2073 aa13.48□□□□□ -0.25
DDX55P1-201ENST00000603334 NEFLP07196 543 aa13.47□□□□□ -0.25
DDX55P1-201ENST00000603334 GOLGA2Q08379 1002 aa13.47□□□□□ -0.25
DDX55P1-201ENST00000603334 CDCA7LQ96GN5 454 aa13.47□□□□□ -0.25
DDX55P1-201ENST00000603334 ACSBG1Q96GR2 724 aa13.47□□□□□ -0.25
DDX55P1-201ENST00000603334 ANO8Q9HCE9 1232 aaPredicted RBP13.47□□□□□ -0.25
DDX55P1-201ENST00000603334 SULT6B1Q6IMI4 303 aa13.47□□□□□ -0.25
DDX55P1-201ENST00000603334 SUPT16HQ9Y5B9 1047 aaKnown RBP13.47□□□□□ -0.25
DDX55P1-201ENST00000603334 ITGB4P16144 1822 aa13.46□□□□□ -0.26
DDX55P1-201ENST00000603334 PLEKHO1Q53GL0 409 aaPredicted RBP13.46□□□□□ -0.26
DDX55P1-201ENST00000603334 DDX54Q8TDD1 881 aaKnown RBP13.46□□□□□ -0.26
DDX55P1-201ENST00000603334 PLEKHF1Q96S99 279 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms