RNA–Protein interactions for RNA: ENST00000603038.1

CHCHD2P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 3, humanhuman

BASIC

Gene CHCHD2P3, Length 451 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD2P3-201ENST00000603038 KIF24Q5T7B8 1368 aa21.62■■□□□ 1.05
CHCHD2P3-201ENST00000603038 RGPD3A6NKT7 1758 aaPredicted RBP21.62■■□□□ 1.05
CHCHD2P3-201ENST00000603038 RGPD4Q7Z3J3 1758 aa21.62■■□□□ 1.05
CHCHD2P3-201ENST00000603038 LRP5O75197 1615 aa21.62■■□□□ 1.05
CHCHD2P3-201ENST00000603038 WASHC2AQ641Q2 1341 aa21.61■■□□□ 1.05
CHCHD2P3-201ENST00000603038 SHANK3Q9BYB0 1731 aa21.61■■□□□ 1.05
CHCHD2P3-201ENST00000603038 PRIM1P49642 420 aaKnown RBP21.61■■□□□ 1.05
CHCHD2P3-201ENST00000603038 KIF7Q2M1P5 1343 aa21.6■■□□□ 1.05
CHCHD2P3-201ENST00000603038 BTAF1O14981 1849 aa21.6■■□□□ 1.05
CHCHD2P3-201ENST00000603038 RAPGEF4Q8WZA2 1011 aa21.6■■□□□ 1.05
CHCHD2P3-201ENST00000603038 SMG6Q86US8 1419 aaKnown RBP21.6■■□□□ 1.05
CHCHD2P3-201ENST00000603038 TATP17735 454 aaPredicted RBP21.59■■□□□ 1.05
CHCHD2P3-201ENST00000603038 EYA1Q99502 592 aa21.59■■□□□ 1.05
CHCHD2P3-201ENST00000603038 SYTL4Q96C24 671 aaPredicted RBP21.58■■□□□ 1.05
CHCHD2P3-201ENST00000603038 LRRC4BQ9NT99 713 aa21.57■■□□□ 1.04
CHCHD2P3-201ENST00000603038 ANKRD26Q9UPS8 1709 aa21.56■■□□□ 1.04
CHCHD2P3-201ENST00000603038 KCNQ4P56696 695 aa21.56■■□□□ 1.04
CHCHD2P3-201ENST00000603038 CYP27B1O15528 508 aa21.55■■□□□ 1.04
CHCHD2P3-201ENST00000603038 EIF4A2Q14240 407 aaKnown RBP21.55■■□□□ 1.04
CHCHD2P3-201ENST00000603038 NSD2O96028 1365 aa21.54■■□□□ 1.04
CHCHD2P3-201ENST00000603038 SLC15A2Q16348 729 aa21.54■■□□□ 1.04
CHCHD2P3-201ENST00000603038 MORC1Q86VD1 984 aa21.54■■□□□ 1.04
CHCHD2P3-201ENST00000603038 STK32BQ9NY57 414 aa21.53■■□□□ 1.04
CHCHD2P3-201ENST00000603038 KNSTRNQ9Y448 316 aa21.53■■□□□ 1.04
CHCHD2P3-201ENST00000603038 DOT1LQ8TEK3 1739 aa21.52■■□□□ 1.04
CHCHD2P3-201ENST00000603038 AMER1Q5JTC6 1135 aaPredicted RBP21.52■■□□□ 1.04
CHCHD2P3-201ENST00000603038 NCAPD2Q15021 1401 aa21.52■■□□□ 1.04
CHCHD2P3-201ENST00000603038 PER1O15534 1290 aaPredicted RBP21.5■■□□□ 1.03
CHCHD2P3-201ENST00000603038 ZBTB7AO95365 584 aa21.5■■□□□ 1.03
CHCHD2P3-201ENST00000603038 ZNF827Q17R98 1081 aa21.5■■□□□ 1.03
CHCHD2P3-201ENST00000603038 SPON1Q9HCB6 807 aa21.5■■□□□ 1.03
CHCHD2P3-201ENST00000603038 PCDH11XQ9BZA7 1347 aa21.49■■□□□ 1.03
CHCHD2P3-201ENST00000603038 PCDH11YQ9BZA8 1340 aa21.49■■□□□ 1.03
CHCHD2P3-201ENST00000603038 CASZ1Q86V15 1759 aa21.48■■□□□ 1.03
CHCHD2P3-201ENST00000603038 ATF5Q9Y2D1 282 aaPredicted RBP21.48■■□□□ 1.03
CHCHD2P3-201ENST00000603038 AKT1S1Q96B36 256 aa21.46■■□□□ 1.03
CHCHD2P3-201ENST00000603038 PAPPAQ13219 1627 aa21.46■■□□□ 1.03
CHCHD2P3-201ENST00000603038 SLC27A3Q5K4L6 730 aa21.45■■□□□ 1.02
CHCHD2P3-201ENST00000603038 MPRIPQ6WCQ1 1025 aa21.45■■□□□ 1.02
CHCHD2P3-201ENST00000603038 SPG7Q9UQ90 795 aa21.45■■□□□ 1.02
CHCHD2P3-201ENST00000603038 PKD1L3Q7Z443 1732 aa21.44■■□□□ 1.02
CHCHD2P3-201ENST00000603038 NKX1-1Q15270 411 aaPredicted RBP21.44■■□□□ 1.02
CHCHD2P3-201ENST00000603038 IGSF1Q8N6C5 1336 aa21.44■■□□□ 1.02
CHCHD2P3-201ENST00000603038 PTGER2P43116 358 aa21.43■■□□□ 1.02
CHCHD2P3-201ENST00000603038 CC2D1BQ5T0F9 858 aaKnown RBP21.43■■□□□ 1.02
CHCHD2P3-201ENST00000603038 LY75O60449 1722 aa21.42■■□□□ 1.02
CHCHD2P3-201ENST00000603038 CNGB1Q14028 1251 aaPredicted RBP21.42■■□□□ 1.02
CHCHD2P3-201ENST00000603038 AEBP1Q8IUX7 1158 aa21.42■■□□□ 1.02
CHCHD2P3-201ENST00000603038 PIGBQ92521 554 aa21.42■■□□□ 1.02
CHCHD2P3-201ENST00000603038 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.42■■□□□ 1.02
CHCHD2P3-201ENST00000603038 TOGARAM1Q9Y4F4 1720 aa21.42■■□□□ 1.02
CHCHD2P3-201ENST00000603038 ITGB4P16144 1822 aa21.41■■□□□ 1.02
CHCHD2P3-201ENST00000603038 PHKG2P15735 406 aa21.41■■□□□ 1.02
CHCHD2P3-201ENST00000603038 PPP1R1BQ9UD71 204 aaPredicted RBP21.41■■□□□ 1.02
CHCHD2P3-201ENST00000603038 CCNL1Q9UK58 526 aaPredicted RBP21.41■■□□□ 1.02
CHCHD2P3-201ENST00000603038 IL13P35225 146 aa21.4■■□□□ 1.02
CHCHD2P3-201ENST00000603038 MTHFSP49914 203 aa21.4■■□□□ 1.02
CHCHD2P3-201ENST00000603038 IFNL2Q8IZJ0 200 aa21.39■■□□□ 1.01
CHCHD2P3-201ENST00000603038 SGIP1Q9BQI5 828 aa21.38■■□□□ 1.01
CHCHD2P3-201ENST00000603038 PNPLA7Q6ZV29 1317 aa21.37■■□□□ 1.01
CHCHD2P3-201ENST00000603038 MTFR1LQ9H019 292 aa21.37■■□□□ 1.01
CHCHD2P3-201ENST00000603038 SULT6B1Q6IMI4 303 aa21.36■■□□□ 1.01
CHCHD2P3-201ENST00000603038 TFCP2L1Q9NZI6 479 aa21.36■■□□□ 1.01
CHCHD2P3-201ENST00000603038 PALLDQ8WX93 1383 aa21.36■■□□□ 1.01
CHCHD2P3-201ENST00000603038 TUBGCP6Q96RT7 1819 aa21.35■■□□□ 1.01
CHCHD2P3-201ENST00000603038 PLEKHO1Q53GL0 409 aaPredicted RBP21.34■■□□□ 1.01
CHCHD2P3-201ENST00000603038 ASAP1Q9ULH1 1129 aa21.34■■□□□ 1.01
CHCHD2P3-201ENST00000603038 ZNF530Q6P9A1 599 aaPredicted RBP21.32■■□□□ 1
CHCHD2P3-201ENST00000603038 SMIM5Q71RC9 77 aa21.32■■□□□ 1
CHCHD2P3-201ENST00000603038 COL23A1Q86Y22 540 aaPredicted RBP21.32■■□□□ 1
CHCHD2P3-201ENST00000603038 TMOD3Q9NYL9 352 aa21.32■■□□□ 1
CHCHD2P3-201ENST00000603038 SMARCC1Q92922 1105 aaPredicted RBP21.31■■□□□ 1
CHCHD2P3-201ENST00000603038 ATG3Q9NT62 314 aa21.31■■□□□ 1
CHCHD2P3-201ENST00000603038 HMOX1P09601 288 aa21.3■■□□□ 1
CHCHD2P3-201ENST00000603038 AMIGO3Q86WK7 504 aa21.3■■□□□ 1
CHCHD2P3-201ENST00000603038 QSER1Q2KHR3 1735 aa21.29■■□□□ 1
CHCHD2P3-201ENST00000603038 TAF1LQ8IZX4 1826 aa21.29■■□□□ 1
CHCHD2P3-201ENST00000603038 AMOTQ4VCS5 1084 aa21.29■■□□□ 1
CHCHD2P3-201ENST00000603038 FHDC1Q9C0D6 1143 aaPredicted RBP21.29■■□□□ 1
CHCHD2P3-201ENST00000603038 KDRP35968 1356 aa21.28■■□□□ 1
CHCHD2P3-201ENST00000603038 NPC1L1Q9UHC9 1359 aa21.28■■□□□ 1
CHCHD2P3-201ENST00000603038 LOC102724428A0A0B4J2F2 783 aa21.28■■□□□ 1
CHCHD2P3-201ENST00000603038 SIK1P57059 783 aa21.28■■□□□ 1
CHCHD2P3-201ENST00000603038 SLC16A10Q8TF71 515 aa21.28■■□□□ 1
CHCHD2P3-201ENST00000603038 ARXQ96QS3 562 aa21.28■■□□□ 1
CHCHD2P3-201ENST00000603038 ERVV-2B6SEH9 535 aa21.27■■□□□ 1
CHCHD2P3-201ENST00000603038 MSH5O43196 834 aa21.27■■□□□ 1
CHCHD2P3-201ENST00000603038 ITPK1Q13572 414 aa21.27■■□□□ 1
CHCHD2P3-201ENST00000603038 DCAF5Q96JK2 942 aa21.27■■□□□ 1
CHCHD2P3-201ENST00000603038 SYT17Q9BSW7 474 aa21.27■■□□□ 1
CHCHD2P3-201ENST00000603038 KDM6AO15550 1401 aaPredicted RBP21.27■■□□□ 1
CHCHD2P3-201ENST00000603038 PLEKHG2Q9H7P9 1386 aa21.26■□□□□ 0.99
CHCHD2P3-201ENST00000603038 C5P01031 1676 aa21.26■□□□□ 0.99
CHCHD2P3-201ENST00000603038 DIAPH1O60610 1272 aaKnown RBP21.26■□□□□ 0.99
CHCHD2P3-201ENST00000603038 LINC00116Q8NCU8 138 aa21.26■□□□□ 0.99
CHCHD2P3-201ENST00000603038 SLC4A9Q96Q91 983 aa21.26■□□□□ 0.99
CHCHD2P3-201ENST00000603038 HSP90AB1P08238 724 aaKnown RBP21.25■□□□□ 0.99
CHCHD2P3-201ENST00000603038 ATP6V1AP38606 617 aa21.23■□□□□ 0.99
CHCHD2P3-201ENST00000603038 CABP4P57796 275 aa21.23■□□□□ 0.99
CHCHD2P3-201ENST00000603038 C1orf141Q5JVX7 400 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms