RNA–Protein interactions for RNA: ENST00000602841.5

SCNM1-207, Transcript of sodium channel modifier 1, humanhuman

TSL 3

Gene SCNM1, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-207ENST00000602841 ABCA3Q99758 1704 aa14.32□□□□□ -0.12
SCNM1-207ENST00000602841 APAF1O14727 1248 aa14.32□□□□□ -0.12
SCNM1-207ENST00000602841 U2SURPO15042 1029 aaKnown RBP14.32□□□□□ -0.12
SCNM1-207ENST00000602841 NCBP3Q53F19 620 aaKnown RBP14.32□□□□□ -0.12
SCNM1-207ENST00000602841 BTG4Q9NY30 223 aa14.32□□□□□ -0.12
SCNM1-207ENST00000602841 KIAA0232Q92628 1395 aa14.32□□□□□ -0.12
SCNM1-207ENST00000602841 LTN1O94822 1766 aa14.32□□□□□ -0.12
SCNM1-207ENST00000602841 NBPF6Q5VWK0 638 aa14.31□□□□□ -0.12
SCNM1-207ENST00000602841 NBPF4Q96M43 638 aa14.31□□□□□ -0.12
SCNM1-207ENST00000602841 SPATA31A5Q5VU36 1347 aa14.31□□□□□ -0.12
SCNM1-207ENST00000602841 SPATA31A7Q8IWB4 1347 aa14.31□□□□□ -0.12
SCNM1-207ENST00000602841 LMO7Q8WWI1 1683 aa14.3□□□□□ -0.12
SCNM1-207ENST00000602841 RREB1Q92766 1687 aa14.3□□□□□ -0.12
SCNM1-207ENST00000602841 NUP188Q5SRE5 1749 aa14.3□□□□□ -0.12
SCNM1-207ENST00000602841 HMOX1P09601 288 aa14.3□□□□□ -0.12
SCNM1-207ENST00000602841 TCP11L2Q8N4U5 519 aa14.3□□□□□ -0.12
SCNM1-207ENST00000602841 ABCC6O95255 1503 aa14.3□□□□□ -0.12
SCNM1-207ENST00000602841 PTGER2P43116 358 aa14.29□□□□□ -0.12
SCNM1-207ENST00000602841 CHRNA2Q15822 529 aa14.29□□□□□ -0.12
SCNM1-207ENST00000602841 SYT17Q9BSW7 474 aa14.29□□□□□ -0.12
SCNM1-207ENST00000602841 PDGFDQ9GZP0 370 aaPredicted RBP14.29□□□□□ -0.12
SCNM1-207ENST00000602841 ERBB3P21860 1342 aa14.28□□□□□ -0.12
SCNM1-207ENST00000602841 PRKAR2BP31323 418 aa14.28□□□□□ -0.12
SCNM1-207ENST00000602841 SULT6B1Q6IMI4 303 aa14.28□□□□□ -0.12
SCNM1-207ENST00000602841 ANKRD24Q8TF21 1146 aa14.28□□□□□ -0.12
SCNM1-207ENST00000602841 TRIM35Q9UPQ4 493 aa14.28□□□□□ -0.12
SCNM1-207ENST00000602841 THSD7AQ9UPZ6 1657 aa14.28□□□□□ -0.12
SCNM1-207ENST00000602841 TRMT2AQ8IZ69 625 aaKnown RBP14.27□□□□□ -0.13
SCNM1-207ENST00000602841 FHDC1Q9C0D6 1143 aaPredicted RBP14.27□□□□□ -0.13
SCNM1-207ENST00000602841 SPINK5Q9NQ38 1064 aaPredicted RBP14.27□□□□□ -0.13
SCNM1-207ENST00000602841 NRAPQ86VF7 1730 aa14.27□□□□□ -0.13
SCNM1-207ENST00000602841 TMPOP42166 694 aaKnown RBP14.26□□□□□ -0.13
SCNM1-207ENST00000602841 CCDC27Q2M243 656 aa14.26□□□□□ -0.13
SCNM1-207ENST00000602841 ZBTB7AO95365 584 aa14.25□□□□□ -0.13
SCNM1-207ENST00000602841 WWC1Q8IX03 1113 aa14.25□□□□□ -0.13
SCNM1-207ENST00000602841 LTV1Q96GA3 475 aaPredicted RBP14.25□□□□□ -0.13
SCNM1-207ENST00000602841 CDCA7LQ96GN5 454 aa14.25□□□□□ -0.13
SCNM1-207ENST00000602841 RRP7AQ9Y3A4 280 aaKnown RBP14.25□□□□□ -0.13
SCNM1-207ENST00000602841 SALL2Q9Y467 1007 aaPredicted RBP14.25□□□□□ -0.13
SCNM1-207ENST00000602841 RGPD5Q99666 1765 aa14.24□□□□□ -0.13
SCNM1-207ENST00000602841 NGEFQ8N5V2 710 aa14.24□□□□□ -0.13
SCNM1-207ENST00000602841 USHBP1Q8N6Y0 703 aa14.24□□□□□ -0.13
SCNM1-207ENST00000602841 ANO8Q9HCE9 1232 aaPredicted RBP14.24□□□□□ -0.13
SCNM1-207ENST00000602841 FAM208AQ9UK61 1670 aaKnown RBP14.23□□□□□ -0.13
SCNM1-207ENST00000602841 ZBTB7CA1YPR0 619 aa14.23□□□□□ -0.13
SCNM1-207ENST00000602841 ATF5Q9Y2D1 282 aaPredicted RBP14.23□□□□□ -0.13
SCNM1-207ENST00000602841 COL5A2P05997 1499 aaPredicted RBP14.23□□□□□ -0.13
SCNM1-207ENST00000602841 CHD4Q14839 1912 aa14.23□□□□□ -0.13
SCNM1-207ENST00000602841 RGPD2P0DJD1 1756 aa14.22□□□□□ -0.13
SCNM1-207ENST00000602841 ADRA2BP18089 450 aa14.22□□□□□ -0.13
SCNM1-207ENST00000602841 NFE2L2Q16236 605 aa14.22□□□□□ -0.13
SCNM1-207ENST00000602841 MTHFSDQ2M296 383 aaKnown RBP14.22□□□□□ -0.13
SCNM1-207ENST00000602841 SPATA31A1Q5TZJ5 1347 aa14.21□□□□□ -0.13
SCNM1-207ENST00000602841 SLFN5Q08AF3 891 aa14.21□□□□□ -0.13
SCNM1-207ENST00000602841 PRDM11Q9NQV5 511 aa14.21□□□□□ -0.13
SCNM1-207ENST00000602841 PDE3BQ13370 1112 aa14.2□□□□□ -0.14
SCNM1-207ENST00000602841 PNNQ9H307 717 aaKnown RBP14.2□□□□□ -0.14
SCNM1-207ENST00000602841 CASZ1Q86V15 1759 aa14.19□□□□□ -0.14
SCNM1-207ENST00000602841 WDR17Q8IZU2 1322 aa14.19□□□□□ -0.14
SCNM1-207ENST00000602841 RIPK4P57078 832 aa14.19□□□□□ -0.14
SCNM1-207ENST00000602841 DUSP27Q5VZP5 1158 aa14.19□□□□□ -0.14
SCNM1-207ENST00000602841 GOLGB1Q14789 3259 aaKnown RBP14.18□□□□□ -0.14
SCNM1-207ENST00000602841 NEUROD2Q15784 382 aa14.18□□□□□ -0.14
SCNM1-207ENST00000602841 LARP1Q6PKG0 1096 aaKnown RBP14.18□□□□□ -0.14
SCNM1-207ENST00000602841 WDR63Q8IWG1 891 aa14.18□□□□□ -0.14
SCNM1-207ENST00000602841 SGIP1Q9BQI5 828 aa14.18□□□□□ -0.14
SCNM1-207ENST00000602841 COL14A1Q05707 1796 aaKnown RBP14.17□□□□□ -0.14
SCNM1-207ENST00000602841 CENPBP07199 599 aaPredicted RBP14.17□□□□□ -0.14
SCNM1-207ENST00000602841 ZNF853P0CG23 659 aa14.17□□□□□ -0.14
SCNM1-207ENST00000602841 MEGF6O75095 1541 aa14.16□□□□□ -0.14
SCNM1-207ENST00000602841 HSPA6P17066 643 aa14.16□□□□□ -0.14
SCNM1-207ENST00000602841 GOLGA2Q08379 1002 aa14.16□□□□□ -0.14
SCNM1-207ENST00000602841 CARD10Q9BWT7 1032 aa14.16□□□□□ -0.14
SCNM1-207ENST00000602841 MAPK8IP3Q9UPT6 1336 aa14.15□□□□□ -0.14
SCNM1-207ENST00000602841 THUMPD2Q9BTF0 503 aaKnown RBP14.15□□□□□ -0.14
SCNM1-207ENST00000602841 NLRP2Q9NX02 1062 aa14.15□□□□□ -0.14
SCNM1-207ENST00000602841 CRB1P82279 1406 aa14.15□□□□□ -0.14
SCNM1-207ENST00000602841 PLEKHG2Q9H7P9 1386 aa14.14□□□□□ -0.15
SCNM1-207ENST00000602841 PLSCR1O15162 318 aa14.14□□□□□ -0.15
SCNM1-207ENST00000602841 DCTN1Q14203 1278 aa14.14□□□□□ -0.15
SCNM1-207ENST00000602841 GPR162Q16538 588 aa14.14□□□□□ -0.15
SCNM1-207ENST00000602841 PROM2Q8N271 834 aa14.14□□□□□ -0.15
SCNM1-207ENST00000602841 IL17REQ8NFR9 667 aa14.14□□□□□ -0.15
SCNM1-207ENST00000602841 SHANK3Q9BYB0 1731 aa14.14□□□□□ -0.15
SCNM1-207ENST00000602841 IL16Q14005 1332 aa14.14□□□□□ -0.15
SCNM1-207ENST00000602841 HTATSF1O43719 755 aaKnown RBP14.12□□□□□ -0.15
SCNM1-207ENST00000602841 CAPN15O75808 1086 aa14.12□□□□□ -0.15
SCNM1-207ENST00000602841 BARGINQ6ZT62 677 aa14.12□□□□□ -0.15
SCNM1-207ENST00000602841 GAS2L2Q8NHY3 880 aa14.12□□□□□ -0.15
SCNM1-207ENST00000602841 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.12□□□□□ -0.15
SCNM1-207ENST00000602841 USP35Q9P2H5 1018 aa14.12□□□□□ -0.15
SCNM1-207ENST00000602841 DLG5Q8TDM6 1919 aa14.11□□□□□ -0.15
SCNM1-207ENST00000602841 CEMIPQ8WUJ3 1361 aa14.11□□□□□ -0.15
SCNM1-207ENST00000602841 OVOS2A0A0G2JMS6 1433 aa14.11□□□□□ -0.15
SCNM1-207ENST00000602841 E9PSI1 815 aa14.11□□□□□ -0.15
SCNM1-207ENST00000602841 SLC34A2O95436 690 aa14.11□□□□□ -0.15
SCNM1-207ENST00000602841 MCM10Q7L590 875 aa14.11□□□□□ -0.15
SCNM1-207ENST00000602841 ARXQ96QS3 562 aa14.11□□□□□ -0.15
SCNM1-207ENST00000602841 BCL11BQ9C0K0 894 aaPredicted RBP14.11□□□□□ -0.15
SCNM1-207ENST00000602841 MTFR1LQ9H019 292 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms