RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 MMTAG2Q9BU76 263 aaKnown RBP10.59□□□□□ -0.71
COMMD3-215ENST00000602574 TMX4Q9H1E5 349 aaPredicted RBP10.59□□□□□ -0.71
COMMD3-215ENST00000602574 A1CFQ9NQ94 594 aaKnown RBP10.59□□□□□ -0.71
COMMD3-215ENST00000602574 TBC1D2BQ9UPU7 963 aa10.59□□□□□ -0.71
COMMD3-215ENST00000602574 V9GYY5 206 aaPredicted RBP10.59□□□□□ -0.71
COMMD3-215ENST00000602574 INSRP06213 1382 aa10.59□□□□□ -0.71
COMMD3-215ENST00000602574 NUCB2P80303 420 aa10.58□□□□□ -0.72
COMMD3-215ENST00000602574 SF3A1Q15459 793 aaKnown RBP10.58□□□□□ -0.72
COMMD3-215ENST00000602574 PACS2Q86VP3 889 aa10.58□□□□□ -0.72
COMMD3-215ENST00000602574 SH3GL3Q99963 347 aa10.58□□□□□ -0.72
COMMD3-215ENST00000602574 RRP15Q9Y3B9 282 aaKnown RBP10.58□□□□□ -0.72
COMMD3-215ENST00000602574 TPM1P09493 284 aa10.58□□□□□ -0.72
COMMD3-215ENST00000602574 FAM163BP0C2L3 166 aa10.58□□□□□ -0.72
COMMD3-215ENST00000602574 CGNL1Q0VF96 1302 aa10.58□□□□□ -0.72
COMMD3-215ENST00000602574 NME8Q8N427 588 aa10.58□□□□□ -0.72
COMMD3-215ENST00000602574 SNX21Q969T3 373 aa10.58□□□□□ -0.72
COMMD3-215ENST00000602574 RIPOR2Q9Y4F9 1068 aa10.58□□□□□ -0.72
COMMD3-215ENST00000602574 TRIM66O15016 1216 aa10.57□□□□□ -0.72
COMMD3-215ENST00000602574 SMC2O95347 1197 aa10.57□□□□□ -0.72
COMMD3-215ENST00000602574 GPS2Q13227 327 aa10.57□□□□□ -0.72
COMMD3-215ENST00000602574 GOLGA5Q8TBA6 731 aa10.57□□□□□ -0.72
COMMD3-215ENST00000602574 PIK3R5Q8WYR1 880 aa10.57□□□□□ -0.72
COMMD3-215ENST00000602574 MAF1Q9H063 256 aa10.57□□□□□ -0.72
COMMD3-215ENST00000602574 SAMD9Q5K651 1589 aa10.57□□□□□ -0.72
COMMD3-215ENST00000602574 CAND2O75155 1236 aa10.56□□□□□ -0.72
COMMD3-215ENST00000602574 SMC5Q8IY18 1101 aa10.56□□□□□ -0.72
COMMD3-215ENST00000602574 EFCAB13Q8IY85 973 aa10.56□□□□□ -0.72
COMMD3-215ENST00000602574 FBXO18Q8NFZ0 1043 aa10.56□□□□□ -0.72
COMMD3-215ENST00000602574 VEZTQ9HBM0 779 aa10.56□□□□□ -0.72
COMMD3-215ENST00000602574 SNAPC4Q5SXM2 1469 aa10.56□□□□□ -0.72
COMMD3-215ENST00000602574 SKILP12757 684 aa10.56□□□□□ -0.72
COMMD3-215ENST00000602574 USP8P40818 1118 aa10.56□□□□□ -0.72
COMMD3-215ENST00000602574 HSP90B2PQ58FF3 399 aa10.56□□□□□ -0.72
COMMD3-215ENST00000602574 DZIP3Q86Y13 1208 aaKnown RBP10.56□□□□□ -0.72
COMMD3-215ENST00000602574 PROCA1Q8NCQ7 364 aaPredicted RBP10.56□□□□□ -0.72
COMMD3-215ENST00000602574 CCDC26Q8TAB7 109 aa10.56□□□□□ -0.72
COMMD3-215ENST00000602574 GPT2Q8TD30 523 aa10.56□□□□□ -0.72
COMMD3-215ENST00000602574 MIEF2Q96C03 454 aa10.56□□□□□ -0.72
COMMD3-215ENST00000602574 IRAK4Q9NWZ3 460 aa10.56□□□□□ -0.72
COMMD3-215ENST00000602574 CHCHD3Q9NX63 227 aaKnown RBP10.56□□□□□ -0.72
COMMD3-215ENST00000602574 SYNPO2Q9UMS6 1093 aa10.56□□□□□ -0.72
COMMD3-215ENST00000602574 RNF20Q5VTR2 975 aa10.55□□□□□ -0.72
COMMD3-215ENST00000602574 RBSNQ9H1K0 784 aa10.55□□□□□ -0.72
COMMD3-215ENST00000602574 PSD3Q9NYI0 1048 aa10.55□□□□□ -0.72
COMMD3-215ENST00000602574 TRAK1Q9UPV9 953 aa10.55□□□□□ -0.72
COMMD3-215ENST00000602574 PCDHGA4Q9Y5G9 962 aa10.55□□□□□ -0.72
COMMD3-215ENST00000602574 UGGT2Q9NYU1 1516 aa10.55□□□□□ -0.72
COMMD3-215ENST00000602574 RTEL1-TNFRSF6BF6WH68 1400 aa10.55□□□□□ -0.72
COMMD3-215ENST00000602574 SYNRGQ9UMZ2 1314 aa10.55□□□□□ -0.72
COMMD3-215ENST00000602574 SMTNL1A8MU46 457 aa10.55□□□□□ -0.72
COMMD3-215ENST00000602574 SLC5A9Q2M3M2 681 aa10.55□□□□□ -0.72
COMMD3-215ENST00000602574 CCDC191Q8NCU4 936 aa10.55□□□□□ -0.72
COMMD3-215ENST00000602574 HELBQ8NG08 1087 aaPredicted RBP10.55□□□□□ -0.72
COMMD3-215ENST00000602574 CRBNQ96SW2 442 aa10.55□□□□□ -0.72
COMMD3-215ENST00000602574 SUN2Q9UH99 717 aa10.55□□□□□ -0.72
COMMD3-215ENST00000602574 PLEKHH2Q8IVE3 1493 aa10.55□□□□□ -0.72
COMMD3-215ENST00000602574 CADPSQ9ULU8 1353 aa10.54□□□□□ -0.72
COMMD3-215ENST00000602574 SSFA2P28290 1259 aa10.54□□□□□ -0.72
COMMD3-215ENST00000602574 TPM4P67936 248 aa10.54□□□□□ -0.72
COMMD3-215ENST00000602574 TTLL5Q6EMB2 1281 aa10.54□□□□□ -0.72
COMMD3-215ENST00000602574 KRBA2Q6ZNG9 492 aa10.54□□□□□ -0.72
COMMD3-215ENST00000602574 TRIM74Q86UV6 250 aa10.54□□□□□ -0.72
COMMD3-215ENST00000602574 TRIM73Q86UV7 250 aa10.54□□□□□ -0.72
COMMD3-215ENST00000602574 SLX1AQ9BQ83 275 aa10.54□□□□□ -0.72
COMMD3-215ENST00000602574 HIRIP3Q9BW71 556 aaPredicted RBP10.54□□□□□ -0.72
COMMD3-215ENST00000602574 IVLP07476 585 aa10.54□□□□□ -0.72
COMMD3-215ENST00000602574 GRIK3Q13003 919 aa10.54□□□□□ -0.72
COMMD3-215ENST00000602574 BMS1Q14692 1282 aaKnown RBP10.54□□□□□ -0.72
COMMD3-215ENST00000602574 LEKR1Q6ZMV7 388 aa10.54□□□□□ -0.72
COMMD3-215ENST00000602574 CCDC186Q7Z3E2 898 aa10.54□□□□□ -0.72
COMMD3-215ENST00000602574 CADPS2Q86UW7 1296 aa10.54□□□□□ -0.72
COMMD3-215ENST00000602574 MTA3Q9BTC8 594 aa10.54□□□□□ -0.72
COMMD3-215ENST00000602574 ZNF232Q9UNY5 417 aa10.54□□□□□ -0.72
COMMD3-215ENST00000602574 SPATA31E1Q6ZUB1 1445 aa10.54□□□□□ -0.72
COMMD3-215ENST00000602574 IMPDH2P12268 514 aa10.53□□□□□ -0.72
COMMD3-215ENST00000602574 ACRBPQ8NEB7 543 aa10.53□□□□□ -0.72
COMMD3-215ENST00000602574 RPRD2Q5VT52 1461 aaKnown RBP10.53□□□□□ -0.72
COMMD3-215ENST00000602574 ZRANB2O95218 330 aaKnown RBP eCLIP10.53□□□□□ -0.72
COMMD3-215ENST00000602574 RBM12BQ8IXT5 1001 aaKnown RBP10.53□□□□□ -0.72
COMMD3-215ENST00000602574 TEX11Q8IYF3 940 aa10.53□□□□□ -0.72
COMMD3-215ENST00000602574 DRAXINQ8NBI3 349 aaPredicted RBP10.53□□□□□ -0.72
COMMD3-215ENST00000602574 ZNF396Q96N95 335 aaPredicted RBP10.53□□□□□ -0.72
COMMD3-215ENST00000602574 LZTS2Q9BRK4 669 aa10.53□□□□□ -0.72
COMMD3-215ENST00000602574 C20orf194Q5TEA3 1177 aa10.52□□□□□ -0.73
COMMD3-215ENST00000602574 LCMT1Q9UIC8 334 aa10.52□□□□□ -0.73
COMMD3-215ENST00000602574 EIF3AQ14152 1382 aaKnown RBP10.52□□□□□ -0.73
COMMD3-215ENST00000602574 PLEKHH1Q9ULM0 1364 aa10.52□□□□□ -0.73
COMMD3-215ENST00000602574 TMCO5BA8MYB1 307 aa10.51□□□□□ -0.73
COMMD3-215ENST00000602574 ZSCAN23Q3MJ62 389 aa10.51□□□□□ -0.73
COMMD3-215ENST00000602574 ZNF280DQ6N043 979 aa10.51□□□□□ -0.73
COMMD3-215ENST00000602574 RPS6KA3P51812 740 aa10.51□□□□□ -0.73
COMMD3-215ENST00000602574 PDIA5Q14554 519 aa10.51□□□□□ -0.73
COMMD3-215ENST00000602574 RASA3Q14644 834 aa10.51□□□□□ -0.73
COMMD3-215ENST00000602574 SKAP1Q86WV1 359 aa10.51□□□□□ -0.73
COMMD3-215ENST00000602574 LSM14AQ8ND56 463 aaKnown RBP10.51□□□□□ -0.73
COMMD3-215ENST00000602574 AGAP3Q96P47 875 aa10.51□□□□□ -0.73
COMMD3-215ENST00000602574 CPSF2Q9P2I0 782 aaKnown RBP10.51□□□□□ -0.73
COMMD3-215ENST00000602574 KIF14Q15058 1648 aa10.51□□□□□ -0.73
COMMD3-215ENST00000602574 GRIN2BQ13224 1484 aa10.5□□□□□ -0.73
COMMD3-215ENST00000602574 TEX14Q8IWB6 1497 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms