RNA–Protein interactions for RNA: ENST00000601978.1

SUPT5H-220, Transcript of SPT5 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT5H, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT5H-220ENST00000601978 NSD2O96028 1365 aa18.89■□□□□ 0.61
SUPT5H-220ENST00000601978 AMPHP49418 695 aa18.87■□□□□ 0.61
SUPT5H-220ENST00000601978 SYTL4Q96C24 671 aaPredicted RBP18.87■□□□□ 0.61
SUPT5H-220ENST00000601978 LY75O60449 1722 aa18.86■□□□□ 0.61
SUPT5H-220ENST00000601978 KCNQ4P56696 695 aa18.86■□□□□ 0.61
SUPT5H-220ENST00000601978 CGNL1Q0VF96 1302 aa18.85■□□□□ 0.61
SUPT5H-220ENST00000601978 RTL1A6NKG5 1358 aa18.84■□□□□ 0.61
SUPT5H-220ENST00000601978 TUBGCP6Q96RT7 1819 aa18.84■□□□□ 0.61
SUPT5H-220ENST00000601978 SENP3-EIF4A1A0A087X0R7 540 aa18.84■□□□□ 0.61
SUPT5H-220ENST00000601978 FBLN1P23142 703 aa18.84■□□□□ 0.61
SUPT5H-220ENST00000601978 MEGF6O75095 1541 aa18.84■□□□□ 0.61
SUPT5H-220ENST00000601978 DOT1LQ8TEK3 1739 aa18.83■□□□□ 0.61
SUPT5H-220ENST00000601978 SHANK3Q9BYB0 1731 aa18.83■□□□□ 0.61
SUPT5H-220ENST00000601978 TONSLQ96HA7 1378 aa18.83■□□□□ 0.61
SUPT5H-220ENST00000601978 ST20-MTHFSA0A0A6YYL1 179 aa18.83■□□□□ 0.6
SUPT5H-220ENST00000601978 KLHL34Q8N239 644 aa18.83■□□□□ 0.6
SUPT5H-220ENST00000601978 CCNL1Q9UK58 526 aaPredicted RBP18.83■□□□□ 0.6
SUPT5H-220ENST00000601978 HMGB2P26583 209 aaKnown RBP18.82■□□□□ 0.6
SUPT5H-220ENST00000601978 NLGN2Q8NFZ4 835 aa18.82■□□□□ 0.6
SUPT5H-220ENST00000601978 USP47Q96K76 1375 aa18.81■□□□□ 0.6
SUPT5H-220ENST00000601978 GRIN3BO60391 1043 aa18.81■□□□□ 0.6
SUPT5H-220ENST00000601978 NBPF6Q5VWK0 638 aa18.81■□□□□ 0.6
SUPT5H-220ENST00000601978 COL23A1Q86Y22 540 aaPredicted RBP18.81■□□□□ 0.6
SUPT5H-220ENST00000601978 NBPF4Q96M43 638 aa18.81■□□□□ 0.6
SUPT5H-220ENST00000601978 RGPD2P0DJD1 1756 aa18.81■□□□□ 0.6
SUPT5H-220ENST00000601978 FYB1O15117 783 aa18.8■□□□□ 0.6
SUPT5H-220ENST00000601978 RRS1Q15050 365 aaKnown RBP18.79■□□□□ 0.6
SUPT5H-220ENST00000601978 PELP1Q8IZL8 1130 aaKnown RBP18.79■□□□□ 0.6
SUPT5H-220ENST00000601978 RAPGEF4Q8WZA2 1011 aa18.79■□□□□ 0.6
SUPT5H-220ENST00000601978 GIGYF1O75420 1035 aaPredicted RBP18.78■□□□□ 0.6
SUPT5H-220ENST00000601978 YBX3P16989 372 aaKnown RBP eCLIP18.77■□□□□ 0.6
SUPT5H-220ENST00000601978 TRIM26Q12899 539 aaPredicted RBP18.77■□□□□ 0.6
SUPT5H-220ENST00000601978 FLAD1Q8NFF5 587 aa18.77■□□□□ 0.6
SUPT5H-220ENST00000601978 SMG6Q86US8 1419 aaKnown RBP18.76■□□□□ 0.59
SUPT5H-220ENST00000601978 MSH5O43196 834 aa18.76■□□□□ 0.59
SUPT5H-220ENST00000601978 TATP17735 454 aaPredicted RBP18.76■□□□□ 0.59
SUPT5H-220ENST00000601978 USHBP1Q8N6Y0 703 aa18.75■□□□□ 0.59
SUPT5H-220ENST00000601978 GGNBP2Q9H3C7 697 aa18.75■□□□□ 0.59
SUPT5H-220ENST00000601978 CD2APQ9Y5K6 639 aa18.75■□□□□ 0.59
SUPT5H-220ENST00000601978 INSRP06213 1382 aa18.75■□□□□ 0.59
SUPT5H-220ENST00000601978 KIF24Q5T7B8 1368 aa18.75■□□□□ 0.59
SUPT5H-220ENST00000601978 PCDH11XQ9BZA7 1347 aa18.74■□□□□ 0.59
SUPT5H-220ENST00000601978 PCDH11YQ9BZA8 1340 aa18.74■□□□□ 0.59
SUPT5H-220ENST00000601978 TMF1P82094 1093 aa18.73■□□□□ 0.59
SUPT5H-220ENST00000601978 HSP90AB2PQ58FF8 381 aa18.73■□□□□ 0.59
SUPT5H-220ENST00000601978 FLT4P35916 1363 aa18.72■□□□□ 0.59
SUPT5H-220ENST00000601978 MSL1Q68DK7 614 aa18.72■□□□□ 0.59
SUPT5H-220ENST00000601978 PALLDQ8WX93 1383 aa18.71■□□□□ 0.59
SUPT5H-220ENST00000601978 CYP27B1O15528 508 aa18.71■□□□□ 0.59
SUPT5H-220ENST00000601978 SMARCC1Q92922 1105 aaPredicted RBP18.71■□□□□ 0.59
SUPT5H-220ENST00000601978 C5P01031 1676 aa18.7■□□□□ 0.58
SUPT5H-220ENST00000601978 MPRIPQ6WCQ1 1025 aa18.69■□□□□ 0.58
SUPT5H-220ENST00000601978 TAF1LQ8IZX4 1826 aa18.69■□□□□ 0.58
SUPT5H-220ENST00000601978 GOLGB1Q14789 3259 aaKnown RBP18.69■□□□□ 0.58
SUPT5H-220ENST00000601978 NKX1-1Q15270 411 aaPredicted RBP18.68■□□□□ 0.58
SUPT5H-220ENST00000601978 CDCA8Q53HL2 280 aa18.68■□□□□ 0.58
SUPT5H-220ENST00000601978 NCAPD2Q15021 1401 aa18.67■□□□□ 0.58
SUPT5H-220ENST00000601978 NSD3Q9BZ95 1437 aa18.66■□□□□ 0.58
SUPT5H-220ENST00000601978 ATP10DQ9P241 1426 aa18.66■□□□□ 0.58
SUPT5H-220ENST00000601978 PIGBQ92521 554 aa18.65■□□□□ 0.58
SUPT5H-220ENST00000601978 AK7Q96M32 723 aa18.65■□□□□ 0.58
SUPT5H-220ENST00000601978 C4BP0C0L5 1744 aa18.65■□□□□ 0.58
SUPT5H-220ENST00000601978 AMIGO3Q86WK7 504 aa18.64■□□□□ 0.57
SUPT5H-220ENST00000601978 CARD14Q9BXL6 1004 aa18.64■□□□□ 0.57
SUPT5H-220ENST00000601978 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.64■□□□□ 0.572e-7■■■□□ 15.5
SUPT5H-220ENST00000601978 ITGB4P16144 1822 aa18.64■□□□□ 0.57
SUPT5H-220ENST00000601978 ADCY9O60503 1353 aa18.64■□□□□ 0.57
SUPT5H-220ENST00000601978 PKD1L3Q7Z443 1732 aa18.63■□□□□ 0.57
SUPT5H-220ENST00000601978 TOGARAM1Q9Y4F4 1720 aa18.63■□□□□ 0.57
SUPT5H-220ENST00000601978 KIF20BQ96Q89 1820 aa18.63■□□□□ 0.57
SUPT5H-220ENST00000601978 SSFA2P28290 1259 aa18.63■□□□□ 0.57
SUPT5H-220ENST00000601978 SPG7Q9UQ90 795 aa18.63■□□□□ 0.57
SUPT5H-220ENST00000601978 EMILIN1Q9Y6C2 1016 aa18.63■□□□□ 0.57
SUPT5H-220ENST00000601978 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.62■□□□□ 0.57
SUPT5H-220ENST00000601978 UBR3Q6ZT12 1888 aa18.62■□□□□ 0.57
SUPT5H-220ENST00000601978 MAP2P11137 1827 aaKnown RBP18.61■□□□□ 0.57
SUPT5H-220ENST00000601978 WASHC2AQ641Q2 1341 aa18.61■□□□□ 0.57
SUPT5H-220ENST00000601978 LOC102724428A0A0B4J2F2 783 aa18.61■□□□□ 0.57
SUPT5H-220ENST00000601978 SIK1P57059 783 aa18.61■□□□□ 0.57
SUPT5H-220ENST00000601978 GPBP1L1Q9HC44 474 aaPredicted RBP18.61■□□□□ 0.57
SUPT5H-220ENST00000601978 IFFO2Q5TF58 517 aa18.6■□□□□ 0.57
SUPT5H-220ENST00000601978 PCGF6Q9BYE7 350 aa18.6■□□□□ 0.57
SUPT5H-220ENST00000601978 IGSF1Q8N6C5 1336 aa18.59■□□□□ 0.57
SUPT5H-220ENST00000601978 LINC00116Q8NCU8 138 aa18.59■□□□□ 0.57
SUPT5H-220ENST00000601978 PHF14O94880 888 aa18.58■□□□□ 0.56
SUPT5H-220ENST00000601978 SMIM5Q71RC9 77 aa18.58■□□□□ 0.56
SUPT5H-220ENST00000601978 EYA1Q99502 592 aa18.58■□□□□ 0.56
SUPT5H-220ENST00000601978 TMOD3Q9NYL9 352 aa18.57■□□□□ 0.56
SUPT5H-220ENST00000601978 ASAP1Q9ULH1 1129 aa18.57■□□□□ 0.56
SUPT5H-220ENST00000601978 ANKRD26Q9UPS8 1709 aa18.57■□□□□ 0.56
SUPT5H-220ENST00000601978 PLEKHG2Q9H7P9 1386 aa18.56■□□□□ 0.56
SUPT5H-220ENST00000601978 PPM1GO15355 546 aaPredicted RBP18.56■□□□□ 0.56
SUPT5H-220ENST00000601978 HSPA6P17066 643 aa18.56■□□□□ 0.56
SUPT5H-220ENST00000601978 ITPK1Q13572 414 aa18.56■□□□□ 0.56
SUPT5H-220ENST00000601978 IFNL2Q8IZJ0 200 aa18.56■□□□□ 0.56
SUPT5H-220ENST00000601978 PHKG2P15735 406 aa18.55■□□□□ 0.56
SUPT5H-220ENST00000601978 GNPATO15228 680 aa18.54■□□□□ 0.56
SUPT5H-220ENST00000601978 ATP6V1AP38606 617 aa18.54■□□□□ 0.56
SUPT5H-220ENST00000601978 ATG3Q9NT62 314 aa18.54■□□□□ 0.56
SUPT5H-220ENST00000601978 POLKQ9UBT6 870 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms