RNA–Protein interactions for RNA: ENST00000601656.5

FARP1-235, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 806 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-235ENST00000601656 ANKRD50Q9ULJ7 1429 aa13.62□□□□□ -0.23
FARP1-235ENST00000601656 NPHP3Q7Z494 1330 aa13.62□□□□□ -0.23
FARP1-235ENST00000601656 IGSF3O75054 1194 aa13.61□□□□□ -0.23
FARP1-235ENST00000601656 OSBPP22059 807 aa13.61□□□□□ -0.23
FARP1-235ENST00000601656 XPCQ01831 940 aaPredicted RBP13.61□□□□□ -0.23
FARP1-235ENST00000601656 EN1Q05925 392 aaPredicted RBP13.61□□□□□ -0.23
FARP1-235ENST00000601656 ESCO1Q5FWF5 840 aa13.61□□□□□ -0.23
FARP1-235ENST00000601656 SLIT2O94813 1529 aa13.6□□□□□ -0.23
FARP1-235ENST00000601656 SPDYE5A6NIY4 337 aa13.6□□□□□ -0.23
FARP1-235ENST00000601656 PATL2C9JE40 543 aaKnown RBP13.6□□□□□ -0.23
FARP1-235ENST00000601656 FOXO3O43524 673 aa13.6□□□□□ -0.23
FARP1-235ENST00000601656 FOXD4L5Q5VV16 416 aaPredicted RBP13.6□□□□□ -0.23
FARP1-235ENST00000601656 FOXD4L4Q8WXT5 416 aaPredicted RBP13.6□□□□□ -0.23
FARP1-235ENST00000601656 COG6Q9Y2V7 657 aa13.59□□□□□ -0.23
FARP1-235ENST00000601656 VPS72Q15906 364 aa13.58□□□□□ -0.24
FARP1-235ENST00000601656 IFFO2Q5TF58 517 aa13.58□□□□□ -0.24
FARP1-235ENST00000601656 REPIN1Q9BWE0 567 aaKnown RBP13.58□□□□□ -0.24
FARP1-235ENST00000601656 ADGRL2O95490 1459 aa13.57□□□□□ -0.24
FARP1-235ENST00000601656 FBXW7Q969H0 707 aa13.57□□□□□ -0.24
FARP1-235ENST00000601656 PXDNQ92626 1479 aa13.56□□□□□ -0.24
FARP1-235ENST00000601656 A0A0G2JS52 829 aa13.56□□□□□ -0.24
FARP1-235ENST00000601656 FOXK1P85037 733 aa13.56□□□□□ -0.24
FARP1-235ENST00000601656 MYT1Q01538 1121 aa13.56□□□□□ -0.24
FARP1-235ENST00000601656 CDAN1Q8IWY9 1227 aa13.56□□□□□ -0.24
FARP1-235ENST00000601656 TMUB1Q9BVT8 246 aa13.56□□□□□ -0.24
FARP1-235ENST00000601656 ZNF330Q9Y3S2 320 aaPredicted RBP13.56□□□□□ -0.24
FARP1-235ENST00000601656 IQGAP3Q86VI3 1631 aa13.56□□□□□ -0.24
FARP1-235ENST00000601656 ROBO2Q9HCK4 1378 aa13.56□□□□□ -0.24
FARP1-235ENST00000601656 ZNF428Q96B54 188 aa13.54□□□□□ -0.24
FARP1-235ENST00000601656 ACIN1Q9UKV3 1341 aaKnown RBP13.54□□□□□ -0.24
FARP1-235ENST00000601656 LRPPRCP42704 1394 aaKnown RBP13.54□□□□□ -0.24
FARP1-235ENST00000601656 CLCN1P35523 988 aa13.53□□□□□ -0.24
FARP1-235ENST00000601656 EZH2Q15910 746 aaKnown RBP13.53□□□□□ -0.24
FARP1-235ENST00000601656 RGPD1P0DJD0 1748 aa13.53□□□□□ -0.24
FARP1-235ENST00000601656 E9PSI1 815 aa13.52□□□□□ -0.25
FARP1-235ENST00000601656 FAM50AQ14320 339 aaKnown RBP13.52□□□□□ -0.25
FARP1-235ENST00000601656 FAM182BQ5T319 152 aa13.52□□□□□ -0.25
FARP1-235ENST00000601656 SPATA31A3Q5VYP0 1347 aa13.51□□□□□ -0.25
FARP1-235ENST00000601656 PTGER2P43116 358 aa13.51□□□□□ -0.25
FARP1-235ENST00000601656 FAM98CQ17RN3 349 aaKnown RBP13.51□□□□□ -0.25
FARP1-235ENST00000601656 PROCA1Q8NCQ7 364 aaPredicted RBP13.51□□□□□ -0.25
FARP1-235ENST00000601656 BANK1Q8NDB2 785 aa13.51□□□□□ -0.25
FARP1-235ENST00000601656 USP32Q8NFA0 1604 aa13.5□□□□□ -0.25
FARP1-235ENST00000601656 SENP3-EIF4A1A0A087X0R7 540 aa13.5□□□□□ -0.25
FARP1-235ENST00000601656 MAP3K9P80192 1104 aa13.5□□□□□ -0.25
FARP1-235ENST00000601656 PTGDRQ13258 359 aa13.5□□□□□ -0.25
FARP1-235ENST00000601656 CABLES1Q8TDN4 633 aa13.5□□□□□ -0.25
FARP1-235ENST00000601656 HFM1A2PYH4 1435 aa13.49□□□□□ -0.25
FARP1-235ENST00000601656 NUP155O75694 1391 aa13.49□□□□□ -0.25
FARP1-235ENST00000601656 TMC2Q8TDI7 906 aa13.49□□□□□ -0.25
FARP1-235ENST00000601656 PPP1R1BQ9UD71 204 aaPredicted RBP13.49□□□□□ -0.25
FARP1-235ENST00000601656 NWD2Q9ULI1 1742 aa13.49□□□□□ -0.25
FARP1-235ENST00000601656 PLCH1Q4KWH8 1693 aa13.48□□□□□ -0.25
FARP1-235ENST00000601656 KRT28Q7Z3Y7 464 aa13.48□□□□□ -0.25
FARP1-235ENST00000601656 CAMKK2Q96RR4 588 aa13.48□□□□□ -0.25
FARP1-235ENST00000601656 GPCPD1Q9NPB8 672 aa13.48□□□□□ -0.25
FARP1-235ENST00000601656 NEXMIFQ5QGS0 1516 aa13.48□□□□□ -0.25
FARP1-235ENST00000601656 KCNA1Q09470 495 aa13.47□□□□□ -0.25
FARP1-235ENST00000601656 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.47□□□□□ -0.25
FARP1-235ENST00000601656 FAM83GA6ND36 823 aa13.46□□□□□ -0.25
FARP1-235ENST00000601656 DISP2A7MBM2 1401 aa13.46□□□□□ -0.26
FARP1-235ENST00000601656 SSTR3P32745 418 aaPredicted RBP13.45□□□□□ -0.26
FARP1-235ENST00000601656 PLPP6Q8IY26 295 aa13.45□□□□□ -0.26
FARP1-235ENST00000601656 MICALL2Q8IY33 904 aa13.45□□□□□ -0.26
FARP1-235ENST00000601656 ZNF784Q8NCA9 323 aaPredicted RBP13.45□□□□□ -0.26
FARP1-235ENST00000601656 CDC42BPGQ6DT37 1551 aa13.45□□□□□ -0.26
FARP1-235ENST00000601656 TNS1Q9HBL0 1735 aaKnown RBP13.44□□□□□ -0.26
FARP1-235ENST00000601656 MARVELD3Q96A59 401 aa13.44□□□□□ -0.26
FARP1-235ENST00000601656 SPON1Q9HCB6 807 aa13.44□□□□□ -0.26
FARP1-235ENST00000601656 TRIM37O94972 964 aa13.43□□□□□ -0.26
FARP1-235ENST00000601656 APBA3O96018 575 aa13.43□□□□□ -0.26
FARP1-235ENST00000601656 EMP3P54852 163 aa13.43□□□□□ -0.26
FARP1-235ENST00000601656 PSME1Q06323 249 aa13.43□□□□□ -0.26
FARP1-235ENST00000601656 DOK7Q18PE1 504 aa13.43□□□□□ -0.26
FARP1-235ENST00000601656 NBPF8Q3BBV2 869 aa13.43□□□□□ -0.26
FARP1-235ENST00000601656 NBPF14Q5TI25 921 aa13.43□□□□□ -0.26
FARP1-235ENST00000601656 BEGAINQ9BUH8 593 aa13.43□□□□□ -0.26
FARP1-235ENST00000601656 POLR3EQ9NVU0 708 aa13.43□□□□□ -0.26
FARP1-235ENST00000601656 KIF1BO60333 1816 aa13.43□□□□□ -0.26
FARP1-235ENST00000601656 CCDC144AA2RUR9 1427 aa13.42□□□□□ -0.26
FARP1-235ENST00000601656 NAIPQ13075 1403 aa13.42□□□□□ -0.26
FARP1-235ENST00000601656 PRAG1Q86YV5 1406 aa13.42□□□□□ -0.26
FARP1-235ENST00000601656 KCNQ2O43526 872 aa13.42□□□□□ -0.26
FARP1-235ENST00000601656 BRD1O95696 1058 aa13.42□□□□□ -0.26
FARP1-235ENST00000601656 WWC1Q8IX03 1113 aa13.42□□□□□ -0.26
FARP1-235ENST00000601656 SNRKQ9NRH2 765 aa13.42□□□□□ -0.26
FARP1-235ENST00000601656 BTG4Q9NY30 223 aa13.42□□□□□ -0.26
FARP1-235ENST00000601656 CAMTA1Q9Y6Y1 1673 aa13.41□□□□□ -0.26
FARP1-235ENST00000601656 C1QTNF8P60827 252 aa13.41□□□□□ -0.26
FARP1-235ENST00000601656 WAPLQ7Z5K2 1190 aa13.41□□□□□ -0.26
FARP1-235ENST00000601656 NINLQ9Y2I6 1382 aa13.41□□□□□ -0.26
FARP1-235ENST00000601656 TBC1D12O60347 775 aa13.4□□□□□ -0.26
FARP1-235ENST00000601656 MDM2Q00987 491 aaPredicted RBP13.4□□□□□ -0.26
FARP1-235ENST00000601656 FAM196AQ6ZSG2 479 aa13.4□□□□□ -0.26
FARP1-235ENST00000601656 ZNF710Q8N1W2 664 aa13.4□□□□□ -0.26
FARP1-235ENST00000601656 CALR3Q96L12 384 aaKnown RBP13.4□□□□□ -0.26
FARP1-235ENST00000601656 TNS3Q68CZ2 1445 aa13.39□□□□□ -0.27
FARP1-235ENST00000601656 CLTCL1P53675 1640 aa13.39□□□□□ -0.27
FARP1-235ENST00000601656 RIMBP2O15034 1052 aa13.39□□□□□ -0.27
FARP1-235ENST00000601656 DDX12PQ92771 950 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms