RNA–Protein interactions for RNA: ENST00000601545.5

SNRPA-211, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 5

Gene SNRPA, Length 695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-211ENST00000601545 RREB1Q92766 1687 aa28.92■■■□□ 2.22
SNRPA-211ENST00000601545 KIF7Q2M1P5 1343 aa28.91■■■□□ 2.22
SNRPA-211ENST00000601545 PRIM1P49642 420 aaKnown RBP28.9■■■□□ 2.22
SNRPA-211ENST00000601545 ANO8Q9HCE9 1232 aaPredicted RBP28.9■■■□□ 2.22
SNRPA-211ENST00000601545 NUP188Q5SRE5 1749 aa28.89■■■□□ 2.22
SNRPA-211ENST00000601545 MORC1Q86VD1 984 aa28.89■■■□□ 2.22
SNRPA-211ENST00000601545 EYA1Q99502 592 aa28.87■■■□□ 2.21
SNRPA-211ENST00000601545 KAT6BQ8WYB5 2073 aa28.86■■■□□ 2.21
SNRPA-211ENST00000601545 STK32BQ9NY57 414 aa28.86■■■□□ 2.21
SNRPA-211ENST00000601545 NHSQ6T4R5 1651 aa28.83■■■□□ 2.21
SNRPA-211ENST00000601545 EIF4A2Q14240 407 aaKnown RBP28.83■■■□□ 2.21
SNRPA-211ENST00000601545 SLC15A2Q16348 729 aa28.82■■■□□ 2.2
SNRPA-211ENST00000601545 NSD2O96028 1365 aa28.82■■■□□ 2.2
SNRPA-211ENST00000601545 MAP2P11137 1827 aaKnown RBP28.8■■■□□ 2.2
SNRPA-211ENST00000601545 RGPD3A6NKT7 1758 aaPredicted RBP28.8■■■□□ 2.2
SNRPA-211ENST00000601545 RGPD4Q7Z3J3 1758 aa28.8■■■□□ 2.2
SNRPA-211ENST00000601545 PCDH11XQ9BZA7 1347 aa28.8■■■□□ 2.2
SNRPA-211ENST00000601545 PCDH11YQ9BZA8 1340 aa28.8■■■□□ 2.2
SNRPA-211ENST00000601545 PDGFDQ9GZP0 370 aaPredicted RBP28.8■■■□□ 2.2
SNRPA-211ENST00000601545 SPON1Q9HCB6 807 aa28.79■■■□□ 2.2
SNRPA-211ENST00000601545 LRRC4BQ9NT99 713 aa28.79■■■□□ 2.2
SNRPA-211ENST00000601545 LRP5O75197 1615 aa28.79■■■□□ 2.2
SNRPA-211ENST00000601545 CYP27B1O15528 508 aa28.78■■■□□ 2.2
SNRPA-211ENST00000601545 AMER1Q5JTC6 1135 aaPredicted RBP28.77■■■□□ 2.2
SNRPA-211ENST00000601545 SPG7Q9UQ90 795 aa28.77■■■□□ 2.2
SNRPA-211ENST00000601545 KCNQ4P56696 695 aa28.76■■■□□ 2.19
SNRPA-211ENST00000601545 BTAF1O14981 1849 aa28.74■■■□□ 2.19
SNRPA-211ENST00000601545 ZBTB7AO95365 584 aa28.74■■■□□ 2.19
SNRPA-211ENST00000601545 PER1O15534 1290 aaPredicted RBP28.73■■■□□ 2.19
SNRPA-211ENST00000601545 CNGB1Q14028 1251 aaPredicted RBP28.73■■■□□ 2.19
SNRPA-211ENST00000601545 SLC27A3Q5K4L6 730 aa28.73■■■□□ 2.19
SNRPA-211ENST00000601545 MPRIPQ6WCQ1 1025 aa28.73■■■□□ 2.19
SNRPA-211ENST00000601545 PPP1R1BQ9UD71 204 aaPredicted RBP28.73■■■□□ 2.19
SNRPA-211ENST00000601545 ANKRD26Q9UPS8 1709 aa28.73■■■□□ 2.19
SNRPA-211ENST00000601545 CC2D1BQ5T0F9 858 aaKnown RBP28.72■■■□□ 2.19
SNRPA-211ENST00000601545 SHANK3Q9BYB0 1731 aa28.72■■■□□ 2.19
SNRPA-211ENST00000601545 NCAPD2Q15021 1401 aa28.71■■■□□ 2.19
SNRPA-211ENST00000601545 ZNF827Q17R98 1081 aa28.71■■■□□ 2.19
SNRPA-211ENST00000601545 ATF5Q9Y2D1 282 aaPredicted RBP28.71■■■□□ 2.19
SNRPA-211ENST00000601545 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.7■■■□□ 2.18
SNRPA-211ENST00000601545 CCNL1Q9UK58 526 aaPredicted RBP28.68■■■□□ 2.18
SNRPA-211ENST00000601545 IGSF1Q8N6C5 1336 aa28.68■■■□□ 2.18
SNRPA-211ENST00000601545 DOT1LQ8TEK3 1739 aa28.67■■■□□ 2.18
SNRPA-211ENST00000601545 NKX1-1Q15270 411 aaPredicted RBP28.67■■■□□ 2.18
SNRPA-211ENST00000601545 IFNL2Q8IZJ0 200 aa28.67■■■□□ 2.18
SNRPA-211ENST00000601545 PHKG2P15735 406 aa28.65■■■□□ 2.18
SNRPA-211ENST00000601545 MTHFSP49914 203 aa28.65■■■□□ 2.18
SNRPA-211ENST00000601545 AKT1S1Q96B36 256 aa28.65■■■□□ 2.18
SNRPA-211ENST00000601545 PLEKHO1Q53GL0 409 aaPredicted RBP28.63■■■□□ 2.17
SNRPA-211ENST00000601545 AEBP1Q8IUX7 1158 aa28.63■■■□□ 2.17
SNRPA-211ENST00000601545 PIGBQ92521 554 aa28.63■■■□□ 2.17
SNRPA-211ENST00000601545 TFCP2L1Q9NZI6 479 aa28.63■■■□□ 2.17
SNRPA-211ENST00000601545 IL13P35225 146 aa28.62■■■□□ 2.17
SNRPA-211ENST00000601545 SULT6B1Q6IMI4 303 aa28.61■■■□□ 2.17
SNRPA-211ENST00000601545 MTFR1LQ9H019 292 aa28.61■■■□□ 2.17
SNRPA-211ENST00000601545 SMARCC1Q92922 1105 aaPredicted RBP28.59■■■□□ 2.17
SNRPA-211ENST00000601545 TMOD3Q9NYL9 352 aa28.59■■■□□ 2.17
SNRPA-211ENST00000601545 PTGER2P43116 358 aa28.58■■■□□ 2.17
SNRPA-211ENST00000601545 PALLDQ8WX93 1383 aa28.58■■■□□ 2.17
SNRPA-211ENST00000601545 CASZ1Q86V15 1759 aa28.57■■■□□ 2.16
SNRPA-211ENST00000601545 ZNF530Q6P9A1 599 aaPredicted RBP28.57■■■□□ 2.16
SNRPA-211ENST00000601545 PAPPAQ13219 1627 aa28.57■■■□□ 2.16
SNRPA-211ENST00000601545 PKD1L3Q7Z443 1732 aa28.57■■■□□ 2.16
SNRPA-211ENST00000601545 AMOTQ4VCS5 1084 aa28.56■■■□□ 2.16
SNRPA-211ENST00000601545 PNPLA7Q6ZV29 1317 aa28.54■■■□□ 2.16
SNRPA-211ENST00000601545 MSH5O43196 834 aa28.53■■■□□ 2.16
SNRPA-211ENST00000601545 HSP90AB1P08238 724 aaKnown RBP28.53■■■□□ 2.16
SNRPA-211ENST00000601545 DIAPH1O60610 1272 aaKnown RBP28.52■■■□□ 2.16
SNRPA-211ENST00000601545 ASAP1Q9ULH1 1129 aa28.52■■■□□ 2.16
SNRPA-211ENST00000601545 HMOX1P09601 288 aa28.51■■■□□ 2.15
SNRPA-211ENST00000601545 SLC16A10Q8TF71 515 aa28.51■■■□□ 2.15
SNRPA-211ENST00000601545 DCAF5Q96JK2 942 aa28.51■■■□□ 2.15
SNRPA-211ENST00000601545 LY75O60449 1722 aa28.51■■■□□ 2.15
SNRPA-211ENST00000601545 NPC1L1Q9UHC9 1359 aa28.5■■■□□ 2.15
SNRPA-211ENST00000601545 C1orf141Q5JVX7 400 aa28.5■■■□□ 2.15
SNRPA-211ENST00000601545 SGIP1Q9BQI5 828 aa28.5■■■□□ 2.15
SNRPA-211ENST00000601545 PLEKHG2Q9H7P9 1386 aa28.5■■■□□ 2.15
SNRPA-211ENST00000601545 TOGARAM1Q9Y4F4 1720 aa28.49■■■□□ 2.15
SNRPA-211ENST00000601545 ERVV-2B6SEH9 535 aa28.49■■■□□ 2.15
SNRPA-211ENST00000601545 HMGB2P26583 209 aaKnown RBP28.49■■■□□ 2.15
SNRPA-211ENST00000601545 ATG3Q9NT62 314 aa28.49■■■□□ 2.15
SNRPA-211ENST00000601545 LOC102724428A0A0B4J2F2 783 aa28.48■■■□□ 2.15
SNRPA-211ENST00000601545 SIK1P57059 783 aa28.48■■■□□ 2.15
SNRPA-211ENST00000601545 CABP4P57796 275 aa28.48■■■□□ 2.15
SNRPA-211ENST00000601545 COL23A1Q86Y22 540 aaPredicted RBP28.48■■■□□ 2.15
SNRPA-211ENST00000601545 ARXQ96QS3 562 aa28.47■■■□□ 2.15
SNRPA-211ENST00000601545 FHDC1Q9C0D6 1143 aaPredicted RBP28.46■■■□□ 2.15
SNRPA-211ENST00000601545 KDRP35968 1356 aa28.46■■■□□ 2.15
SNRPA-211ENST00000601545 ITGB4P16144 1822 aa28.46■■■□□ 2.15
SNRPA-211ENST00000601545 ATP6V1AP38606 617 aa28.45■■■□□ 2.14
SNRPA-211ENST00000601545 DCAF8L1A6NGE4 600 aa28.44■■■□□ 2.14
SNRPA-211ENST00000601545 AK7Q96M32 723 aa28.44■■■□□ 2.14
SNRPA-211ENST00000601545 U2SURPO15042 1029 aaKnown RBP28.43■■■□□ 2.14
SNRPA-211ENST00000601545 POLD1P28340 1107 aa28.43■■■□□ 2.14
SNRPA-211ENST00000601545 SYT17Q9BSW7 474 aa28.43■■■□□ 2.14
SNRPA-211ENST00000601545 RBM42Q9BTD8 480 aaKnown RBP28.42■■■□□ 2.14
SNRPA-211ENST00000601545 ITPK1Q13572 414 aa28.41■■■□□ 2.14
SNRPA-211ENST00000601545 NFATC2IPQ8NCF5 419 aa28.41■■■□□ 2.14
SNRPA-211ENST00000601545 LINC00116Q8NCU8 138 aa28.41■■■□□ 2.14
SNRPA-211ENST00000601545 SMIM5Q71RC9 77 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms