RNA–Protein interactions for RNA: ENST00000601522.1

TMEM143-213, Transcript of transmembrane protein 143, humanhuman

TSL 2

Gene TMEM143, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM143-213ENST00000601522 MEGF6O75095 1541 aa28.13■■■□□ 2.09
TMEM143-213ENST00000601522 NPC1L1Q9UHC9 1359 aa28.13■■■□□ 2.09
TMEM143-213ENST00000601522 CC2D1BQ5T0F9 858 aaKnown RBP28.13■■■□□ 2.09
TMEM143-213ENST00000601522 KCNQ2O43526 872 aa28.12■■■□□ 2.09
TMEM143-213ENST00000601522 PTF1AQ7RTS3 328 aa28.11■■■□□ 2.09
TMEM143-213ENST00000601522 SPG7Q9UQ90 795 aa28.11■■■□□ 2.09
TMEM143-213ENST00000601522 PCDH11XQ9BZA7 1347 aa28.11■■■□□ 2.09
TMEM143-213ENST00000601522 PCDH11YQ9BZA8 1340 aa28.11■■■□□ 2.09
TMEM143-213ENST00000601522 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.09■■■□□ 2.09
TMEM143-213ENST00000601522 NCAPD2Q15021 1401 aa28.09■■■□□ 2.09
TMEM143-213ENST00000601522 MTHFSP49914 203 aa28.05■■■□□ 2.08
TMEM143-213ENST00000601522 R3HDM1Q15032 1099 aaKnown RBP28.05■■■□□ 2.08
TMEM143-213ENST00000601522 SYTL4Q96C24 671 aaPredicted RBP28.05■■■□□ 2.08
TMEM143-213ENST00000601522 PLEKHG2Q9H7P9 1386 aa28.04■■■□□ 2.08
TMEM143-213ENST00000601522 IGSF1Q8N6C5 1336 aa28.04■■■□□ 2.08
TMEM143-213ENST00000601522 PSDA5PKW4 1024 aaPredicted RBP28.04■■■□□ 2.08
TMEM143-213ENST00000601522 PRIM1P49642 420 aaKnown RBP28.04■■■□□ 2.08
TMEM143-213ENST00000601522 NHSQ6T4R5 1651 aa28.03■■■□□ 2.08
TMEM143-213ENST00000601522 TXNRD1Q16881 649 aa28.03■■■□□ 2.08
TMEM143-213ENST00000601522 RGPD3A6NKT7 1758 aaPredicted RBP28.03■■■□□ 2.08
TMEM143-213ENST00000601522 RGPD4Q7Z3J3 1758 aa28.03■■■□□ 2.08
TMEM143-213ENST00000601522 ZEB1P37275 1124 aaPredicted RBP28.01■■■□□ 2.07
TMEM143-213ENST00000601522 CNGB1Q14028 1251 aaPredicted RBP28.01■■■□□ 2.07
TMEM143-213ENST00000601522 CYP27B1O15528 508 aa28■■■□□ 2.07
TMEM143-213ENST00000601522 PROM2Q8N271 834 aa28■■■□□ 2.07
TMEM143-213ENST00000601522 RREB1Q92766 1687 aa28■■■□□ 2.07
TMEM143-213ENST00000601522 IL13P35225 146 aa27.99■■■□□ 2.07
TMEM143-213ENST00000601522 KAT6BQ8WYB5 2073 aa27.98■■■□□ 2.07
TMEM143-213ENST00000601522 AMOTQ4VCS5 1084 aa27.98■■■□□ 2.07
TMEM143-213ENST00000601522 PLEKHO1Q53GL0 409 aaPredicted RBP27.98■■■□□ 2.07
TMEM143-213ENST00000601522 IFNL2Q8IZJ0 200 aa27.98■■■□□ 2.07
TMEM143-213ENST00000601522 NKX1-1Q15270 411 aaPredicted RBP27.97■■■□□ 2.07
TMEM143-213ENST00000601522 DIAPH1O60610 1272 aaKnown RBP27.96■■■□□ 2.07
TMEM143-213ENST00000601522 HMGB2P26583 209 aaKnown RBP27.96■■■□□ 2.07
TMEM143-213ENST00000601522 SLC27A3Q5K4L6 730 aa27.95■■■□□ 2.06
TMEM143-213ENST00000601522 SULT6B1Q6IMI4 303 aa27.95■■■□□ 2.06
TMEM143-213ENST00000601522 SHANK3Q9BYB0 1731 aa27.95■■■□□ 2.06
TMEM143-213ENST00000601522 STK32BQ9NY57 414 aa27.94■■■□□ 2.06
TMEM143-213ENST00000601522 NUP188Q5SRE5 1749 aa27.94■■■□□ 2.06
TMEM143-213ENST00000601522 HSP90AB1P08238 724 aaKnown RBP27.92■■■□□ 2.06
TMEM143-213ENST00000601522 PHKG2P15735 406 aa27.92■■■□□ 2.06
TMEM143-213ENST00000601522 CFAP53Q96M91 514 aa27.92■■■□□ 2.06
TMEM143-213ENST00000601522 PKD1L3Q7Z443 1732 aa27.92■■■□□ 2.06
TMEM143-213ENST00000601522 BTAF1O14981 1849 aa27.91■■■□□ 2.06
TMEM143-213ENST00000601522 MPRIPQ6WCQ1 1025 aa27.9■■■□□ 2.06
TMEM143-213ENST00000601522 KDRP35968 1356 aa27.88■■■□□ 2.05
TMEM143-213ENST00000601522 SLC15A2Q16348 729 aa27.88■■■□□ 2.05
TMEM143-213ENST00000601522 AEBP1Q8IUX7 1158 aa27.88■■■□□ 2.05
TMEM143-213ENST00000601522 DOT1LQ8TEK3 1739 aa27.88■■■□□ 2.05
TMEM143-213ENST00000601522 SMARCC1Q92922 1105 aaPredicted RBP27.88■■■□□ 2.05
TMEM143-213ENST00000601522 C1orf141Q5JVX7 400 aa27.87■■■□□ 2.05
TMEM143-213ENST00000601522 ZNF530Q6P9A1 599 aaPredicted RBP27.86■■■□□ 2.05
TMEM143-213ENST00000601522 DCAF5Q96JK2 942 aa27.86■■■□□ 2.05
TMEM143-213ENST00000601522 ANO8Q9HCE9 1232 aaPredicted RBP27.86■■■□□ 2.05
TMEM143-213ENST00000601522 TMOD3Q9NYL9 352 aa27.85■■■□□ 2.05
TMEM143-213ENST00000601522 LRRC4BQ9NT99 713 aa27.84■■■□□ 2.05
TMEM143-213ENST00000601522 ERVV-2B6SEH9 535 aa27.83■■■□□ 2.05
TMEM143-213ENST00000601522 PPP2R1AP30153 589 aa27.83■■■□□ 2.05
TMEM143-213ENST00000601522 PIGBQ92521 554 aa27.83■■■□□ 2.05
TMEM143-213ENST00000601522 CCNL1Q9UK58 526 aaPredicted RBP27.83■■■□□ 2.05
TMEM143-213ENST00000601522 NUDCQ9Y266 331 aa27.83■■■□□ 2.05
TMEM143-213ENST00000601522 U2SURPO15042 1029 aaKnown RBP27.82■■■□□ 2.04
TMEM143-213ENST00000601522 HMOX1P09601 288 aa27.82■■■□□ 2.04
TMEM143-213ENST00000601522 SPON1Q9HCB6 807 aa27.8■■■□□ 2.04
TMEM143-213ENST00000601522 PALLDQ8WX93 1383 aa27.78■■■□□ 2.04
TMEM143-213ENST00000601522 DDX10Q13206 875 aaKnown RBP27.77■■■□□ 2.04
TMEM143-213ENST00000601522 AKAP4Q5JQC9 854 aa27.77■■■□□ 2.04
TMEM143-213ENST00000601522 LRP5O75197 1615 aa27.77■■■□□ 2.04
TMEM143-213ENST00000601522 CABP4P57796 275 aa27.76■■■□□ 2.03
TMEM143-213ENST00000601522 AKT1S1Q96B36 256 aa27.76■■■□□ 2.03
TMEM143-213ENST00000601522 TFCP2L1Q9NZI6 479 aa27.75■■■□□ 2.03
TMEM143-213ENST00000601522 KCNQ4P56696 695 aa27.74■■■□□ 2.03
TMEM143-213ENST00000601522 COL3A1P02461 1466 aaPredicted RBP27.74■■■□□ 2.03
TMEM143-213ENST00000601522 RALBP1Q15311 655 aa27.73■■■□□ 2.03
TMEM143-213ENST00000601522 LY75O60449 1722 aa27.72■■■□□ 2.03
TMEM143-213ENST00000601522 ZNF827Q17R98 1081 aa27.72■■■□□ 2.03
TMEM143-213ENST00000601522 SRCAPQ6ZRS2 3230 aa27.72■■■□□ 2.03
TMEM143-213ENST00000601522 ITGB4P16144 1822 aa27.71■■■□□ 2.03
TMEM143-213ENST00000601522 ASAP1Q9ULH1 1129 aa27.71■■■□□ 2.03
TMEM143-213ENST00000601522 TOGARAM1Q9Y4F4 1720 aa27.71■■■□□ 2.03
TMEM143-213ENST00000601522 MTHFSDQ2M296 383 aaKnown RBP27.7■■■□□ 2.02
TMEM143-213ENST00000601522 PAPPAQ13219 1627 aa27.7■■■□□ 2.02
TMEM143-213ENST00000601522 LOC102724428A0A0B4J2F2 783 aa27.69■■■□□ 2.02
TMEM143-213ENST00000601522 U2AF1L5P0DN76 240 aaPredicted RBP27.69■■■□□ 2.02
TMEM143-213ENST00000601522 SIK1P57059 783 aa27.69■■■□□ 2.02
TMEM143-213ENST00000601522 U2AF1Q01081 240 aaKnown RBP eCLIP27.69■■■□□ 2.02
TMEM143-213ENST00000601522 GAS2L2Q8NHY3 880 aa27.69■■■□□ 2.02
TMEM143-213ENST00000601522 SLC16A10Q8TF71 515 aa27.69■■■□□ 2.02
TMEM143-213ENST00000601522 MTFR1LQ9H019 292 aa27.69■■■□□ 2.02
TMEM143-213ENST00000601522 ATG3Q9NT62 314 aa27.69■■■□□ 2.02
TMEM143-213ENST00000601522 PPP1R1BQ9UD71 204 aaPredicted RBP27.69■■■□□ 2.02
TMEM143-213ENST00000601522 ZBTB7AO95365 584 aa27.68■■■□□ 2.02
TMEM143-213ENST00000601522 NFATC2IPQ8NCF5 419 aa27.67■■■□□ 2.02
TMEM143-213ENST00000601522 PDGFDQ9GZP0 370 aaPredicted RBP27.67■■■□□ 2.02
TMEM143-213ENST00000601522 KDM6AO15550 1401 aaPredicted RBP27.67■■■□□ 2.02
TMEM143-213ENST00000601522 FCHSD2O94868 740 aa27.66■■■□□ 2.02
TMEM143-213ENST00000601522 FLAD1Q8NFF5 587 aa27.66■■■□□ 2.02
TMEM143-213ENST00000601522 ATP6V1AP38606 617 aa27.65■■■□□ 2.02
TMEM143-213ENST00000601522 ATF5Q9Y2D1 282 aaPredicted RBP27.64■■■□□ 2.02
TMEM143-213ENST00000601522 RNMTO43148 476 aaKnown RBP27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms