RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 DHX16O60231 1041 aaKnown RBP13.4□□□□□ -0.26
ZNF558-207ENST00000601372 MARCH6O60337 910 aa13.4□□□□□ -0.26
ZNF558-207ENST00000601372 AAMPQ13685 434 aa13.4□□□□□ -0.26
ZNF558-207ENST00000601372 ATF7IPQ6VMQ6 1270 aa13.4□□□□□ -0.26
ZNF558-207ENST00000601372 IL2RBP14784 551 aa13.39□□□□□ -0.27
ZNF558-207ENST00000601372 HSP90AB2PQ58FF8 381 aa13.39□□□□□ -0.27
ZNF558-207ENST00000601372 TMEM57Q8N5G2 664 aa13.39□□□□□ -0.27
ZNF558-207ENST00000601372 RSPH6AQ9H0K4 717 aa13.39□□□□□ -0.27
ZNF558-207ENST00000601372 KIF1BO60333 1816 aa13.39□□□□□ -0.27
ZNF558-207ENST00000601372 GCP02774 474 aa13.39□□□□□ -0.27
ZNF558-207ENST00000601372 ATP6V1AP38606 617 aa13.39□□□□□ -0.27
ZNF558-207ENST00000601372 PZPP20742 1482 aa13.39□□□□□ -0.27
ZNF558-207ENST00000601372 SURF6O75683 361 aaKnown RBP13.39□□□□□ -0.27
ZNF558-207ENST00000601372 IGHDP01880 384 aa13.39□□□□□ -0.27
ZNF558-207ENST00000601372 GNL3LQ9NVN8 582 aaKnown RBP13.39□□□□□ -0.27
ZNF558-207ENST00000601372 NSD2O96028 1365 aa13.39□□□□□ -0.27
ZNF558-207ENST00000601372 MLH3Q9UHC1 1453 aa13.39□□□□□ -0.27
ZNF558-207ENST00000601372 FMNL2Q96PY5 1086 aa13.39□□□□□ -0.27
ZNF558-207ENST00000601372 DNAJC2Q99543 621 aaKnown RBP13.39□□□□□ -0.27
ZNF558-207ENST00000601372 RARSP54136 660 aaKnown RBP13.38□□□□□ -0.27
ZNF558-207ENST00000601372 SYNE3Q6ZMZ3 975 aa13.38□□□□□ -0.27
ZNF558-207ENST00000601372 RUFY2Q8WXA3 655 aa13.38□□□□□ -0.27
ZNF558-207ENST00000601372 ERC2O15083 957 aa13.38□□□□□ -0.27
ZNF558-207ENST00000601372 AMER1Q5JTC6 1135 aaPredicted RBP13.38□□□□□ -0.27
ZNF558-207ENST00000601372 RPGRQ92834 1020 aaKnown RBP13.38□□□□□ -0.27
ZNF558-207ENST00000601372 ANKRD36BQ8N2N9 1353 aa13.38□□□□□ -0.27
ZNF558-207ENST00000601372 SRCIN1Q9C0H9 1055 aa13.37□□□□□ -0.27
ZNF558-207ENST00000601372 GNAI2P04899 355 aa13.37□□□□□ -0.27
ZNF558-207ENST00000601372 FAM98CQ17RN3 349 aaKnown RBP13.37□□□□□ -0.27
ZNF558-207ENST00000601372 AKAP17AQ02040 695 aaKnown RBP13.37□□□□□ -0.27
ZNF558-207ENST00000601372 MAP4K4O95819 1239 aaPredicted RBP13.37□□□□□ -0.27
ZNF558-207ENST00000601372 MYD88Q99836 296 aa13.37□□□□□ -0.27
ZNF558-207ENST00000601372 IGHMBP2P38935 993 aaKnown RBP13.37□□□□□ -0.27
ZNF558-207ENST00000601372 CHD1LQ86WJ1 897 aa13.37□□□□□ -0.27
ZNF558-207ENST00000601372 TBC1D2BQ9UPU7 963 aa13.37□□□□□ -0.27
ZNF558-207ENST00000601372 FOSBP53539 338 aa13.37□□□□□ -0.27
ZNF558-207ENST00000601372 NBPF14Q5TI25 921 aa13.36□□□□□ -0.27
ZNF558-207ENST00000601372 CCT4P50991 539 aaKnown RBP13.36□□□□□ -0.27
ZNF558-207ENST00000601372 CSPP1Q1MSJ5 1256 aa13.36□□□□□ -0.27
ZNF558-207ENST00000601372 SPINK5Q9NQ38 1064 aaPredicted RBP13.36□□□□□ -0.27
ZNF558-207ENST00000601372 GCC2Q8IWJ2 1684 aa13.36□□□□□ -0.27
ZNF558-207ENST00000601372 CCDC158Q5M9N0 1113 aa13.35□□□□□ -0.27
ZNF558-207ENST00000601372 MTMR7Q9Y216 660 aa13.35□□□□□ -0.27
ZNF558-207ENST00000601372 GPTP24298 496 aa13.35□□□□□ -0.27
ZNF558-207ENST00000601372 RASSF8Q8NHQ8 419 aa13.35□□□□□ -0.27
ZNF558-207ENST00000601372 ZNF335Q9H4Z2 1342 aaPredicted RBP13.35□□□□□ -0.27
ZNF558-207ENST00000601372 H3BQV1 296 aa13.35□□□□□ -0.27
ZNF558-207ENST00000601372 IFFO2Q5TF58 517 aa13.35□□□□□ -0.27
ZNF558-207ENST00000601372 TRDNQ13061 729 aa13.35□□□□□ -0.27
ZNF558-207ENST00000601372 TMEM94Q12767 1356 aa13.35□□□□□ -0.27
ZNF558-207ENST00000601372 ANKIB1Q9P2G1 1089 aa13.35□□□□□ -0.27
ZNF558-207ENST00000601372 ZNF622Q969S3 477 aaKnown RBP eCLIP13.34□□□□□ -0.273e-6■□□□□ 10
ZNF558-207ENST00000601372 TCEAL9Q9UHQ7 104 aa13.34□□□□□ -0.27
ZNF558-207ENST00000601372 ERICH2A1L162 156 aa13.34□□□□□ -0.27
ZNF558-207ENST00000601372 CLASRPQ8N2M8 674 aaKnown RBP13.34□□□□□ -0.27
ZNF558-207ENST00000601372 ANO8Q9HCE9 1232 aaPredicted RBP13.34□□□□□ -0.27
ZNF558-207ENST00000601372 TFCP2L1Q9NZI6 479 aa13.34□□□□□ -0.27
ZNF558-207ENST00000601372 SHROOM2Q13796 1616 aa13.34□□□□□ -0.27
ZNF558-207ENST00000601372 NFXL1Q6ZNB6 911 aa13.34□□□□□ -0.27
ZNF558-207ENST00000601372 GCC1Q96CN9 775 aa13.34□□□□□ -0.27
ZNF558-207ENST00000601372 MBD5Q9P267 1494 aa13.34□□□□□ -0.27
ZNF558-207ENST00000601372 HSP90AA2PQ14568 343 aaPredicted RBP13.33□□□□□ -0.27
ZNF558-207ENST00000601372 CAVIN1Q6NZI2 390 aaKnown RBP13.33□□□□□ -0.28
ZNF558-207ENST00000601372 TRMT112Q9UI30 125 aaKnown RBP13.33□□□□□ -0.28
ZNF558-207ENST00000601372 SSH1Q8WYL5 1049 aa13.33□□□□□ -0.28
ZNF558-207ENST00000601372 TEX13AQ9BXU3 409 aaPredicted RBP13.33□□□□□ -0.28
ZNF558-207ENST00000601372 ZBTB3Q9H5J0 574 aa13.33□□□□□ -0.28
ZNF558-207ENST00000601372 HTATSF1O43719 755 aaKnown RBP13.32□□□□□ -0.28
ZNF558-207ENST00000601372 NRDCO43847 1150 aa13.32□□□□□ -0.28
ZNF558-207ENST00000601372 IFT57Q9NWB7 429 aa13.32□□□□□ -0.28
ZNF558-207ENST00000601372 ST5P78524 1137 aa13.32□□□□□ -0.28
ZNF558-207ENST00000601372 PARD3Q8TEW0 1356 aa13.32□□□□□ -0.28
ZNF558-207ENST00000601372 IKQ13123 557 aaPredicted RBP13.32□□□□□ -0.28
ZNF558-207ENST00000601372 ARHGEF10O15013 1369 aa13.32□□□□□ -0.28
ZNF558-207ENST00000601372 COL17A1Q9UMD9 1497 aaPredicted RBP13.32□□□□□ -0.28
ZNF558-207ENST00000601372 ERC1Q8IUD2 1116 aa13.32□□□□□ -0.28
ZNF558-207ENST00000601372 CCAR1Q8IX12 1150 aaKnown RBP13.32□□□□□ -0.28
ZNF558-207ENST00000601372 SMARCC1Q92922 1105 aaPredicted RBP13.32□□□□□ -0.28
ZNF558-207ENST00000601372 FAM83GA6ND36 823 aa13.31□□□□□ -0.28
ZNF558-207ENST00000601372 NUCB2P80303 420 aa13.31□□□□□ -0.28
ZNF558-207ENST00000601372 WWC3Q9ULE0 1092 aa13.31□□□□□ -0.28
ZNF558-207ENST00000601372 ERVK-7P63135 1459 aa13.31□□□□□ -0.28
ZNF558-207ENST00000601372 PRPF40AO75400 957 aaKnown RBP13.31□□□□□ -0.28
ZNF558-207ENST00000601372 HSP90AB3PQ58FF7 597 aa13.31□□□□□ -0.28
ZNF558-207ENST00000601372 FSD1Q9BTV5 496 aa13.31□□□□□ -0.28
ZNF558-207ENST00000601372 NLRP1Q9C000 1473 aa13.31□□□□□ -0.28
ZNF558-207ENST00000601372 VPS37CA5D8V6 355 aaPredicted RBP13.31□□□□□ -0.28
ZNF558-207ENST00000601372 RNF214Q8ND24 703 aa13.31□□□□□ -0.28
ZNF558-207ENST00000601372 A0A087WZG4 1122 aa13.31□□□□□ -0.28
ZNF558-207ENST00000601372 SMARCA5O60264 1052 aaPredicted RBP13.31□□□□□ -0.28
ZNF558-207ENST00000601372 FAM184AQ8NB25 1140 aa13.31□□□□□ -0.28
ZNF558-207ENST00000601372 PLEKHG1Q9ULL1 1385 aa13.31□□□□□ -0.28
ZNF558-207ENST00000601372 KDM5CP41229 1560 aa13.31□□□□□ -0.28
ZNF558-207ENST00000601372 ASXL1Q8IXJ9 1541 aa13.31□□□□□ -0.28
ZNF558-207ENST00000601372 A0A1W2PP64 1363 aa13.3□□□□□ -0.28
ZNF558-207ENST00000601372 NASPP49321 788 aaPredicted RBP13.3□□□□□ -0.28
ZNF558-207ENST00000601372 SLC39A6Q13433 755 aa13.3□□□□□ -0.28
ZNF558-207ENST00000601372 EIF4A2Q14240 407 aaKnown RBP13.3□□□□□ -0.28
ZNF558-207ENST00000601372 LARP1Q6PKG0 1096 aaKnown RBP13.3□□□□□ -0.28
ZNF558-207ENST00000601372 POLD1P28340 1107 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms