RNA–Protein interactions for RNA: ENST00000601299.5

FKRP-225, Transcript of fukutin related protein, humanhuman

TSL 4

Gene FKRP, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FKRP-225ENST00000601299 NBPF6Q5VWK0 638 aa23.18■■□□□ 1.3
FKRP-225ENST00000601299 USHBP1Q8N6Y0 703 aa23.18■■□□□ 1.3
FKRP-225ENST00000601299 NBPF4Q96M43 638 aa23.18■■□□□ 1.3
FKRP-225ENST00000601299 PDGFDQ9GZP0 370 aaPredicted RBP23.18■■□□□ 1.3
FKRP-225ENST00000601299 KAT6BQ8WYB5 2073 aa23.18■■□□□ 1.3
FKRP-225ENST00000601299 RAPGEF4Q8WZA2 1011 aa23.17■■□□□ 1.3
FKRP-225ENST00000601299 DDX54Q8TDD1 881 aaKnown RBP23.16■■□□□ 1.3
FKRP-225ENST00000601299 POLKQ9UBT6 870 aa23.16■■□□□ 1.3
FKRP-225ENST00000601299 WASHC2AQ641Q2 1341 aa23.14■■□□□ 1.3
FKRP-225ENST00000601299 ZBTB7AO95365 584 aa23.13■■□□□ 1.29
FKRP-225ENST00000601299 ZCRB1Q8TBF4 217 aaKnown RBP23.13■■□□□ 1.29
FKRP-225ENST00000601299 STK32BQ9NY57 414 aa23.13■■□□□ 1.29
FKRP-225ENST00000601299 RGPD3A6NKT7 1758 aaPredicted RBP23.12■■□□□ 1.29
FKRP-225ENST00000601299 RGPD4Q7Z3J3 1758 aa23.12■■□□□ 1.29
FKRP-225ENST00000601299 TATP17735 454 aaPredicted RBP23.12■■□□□ 1.29
FKRP-225ENST00000601299 MEGF6O75095 1541 aa23.1■■□□□ 1.29
FKRP-225ENST00000601299 SLC15A2Q16348 729 aa23.1■■□□□ 1.29
FKRP-225ENST00000601299 ATF5Q9Y2D1 282 aaPredicted RBP23.09■■□□□ 1.29
FKRP-225ENST00000601299 CNGB1Q14028 1251 aaPredicted RBP23.08■■□□□ 1.29
FKRP-225ENST00000601299 AMER1Q5JTC6 1135 aaPredicted RBP23.08■■□□□ 1.29
FKRP-225ENST00000601299 CC2D1BQ5T0F9 858 aaKnown RBP23.08■■□□□ 1.29
FKRP-225ENST00000601299 PTGER2P43116 358 aa23.05■■□□□ 1.28
FKRP-225ENST00000601299 EIF4A2Q14240 407 aaKnown RBP23.05■■□□□ 1.28
FKRP-225ENST00000601299 SYTL4Q96C24 671 aaPredicted RBP23.05■■□□□ 1.28
FKRP-225ENST00000601299 EYA1Q99502 592 aa23.05■■□□□ 1.28
FKRP-225ENST00000601299 NHSQ6T4R5 1651 aa23.05■■□□□ 1.28
FKRP-225ENST00000601299 PER1O15534 1290 aaPredicted RBP23.04■■□□□ 1.28
FKRP-225ENST00000601299 CASZ1Q86V15 1759 aa23.03■■□□□ 1.28
FKRP-225ENST00000601299 PCDH11XQ9BZA7 1347 aa23.03■■□□□ 1.28
FKRP-225ENST00000601299 PCDH11YQ9BZA8 1340 aa23.03■■□□□ 1.28
FKRP-225ENST00000601299 LRRC4BQ9NT99 713 aa23.02■■□□□ 1.28
FKRP-225ENST00000601299 DCAF8L1A6NGE4 600 aa23.01■■□□□ 1.27
FKRP-225ENST00000601299 YY1P25490 414 aa23.01■■□□□ 1.27
FKRP-225ENST00000601299 SHANK3Q9BYB0 1731 aa23■■□□□ 1.27
FKRP-225ENST00000601299 SPG7Q9UQ90 795 aa23■■□□□ 1.27
FKRP-225ENST00000601299 PRIM1P49642 420 aaKnown RBP22.99■■□□□ 1.27
FKRP-225ENST00000601299 ZNF827Q17R98 1081 aa22.99■■□□□ 1.27
FKRP-225ENST00000601299 MTFR1LQ9H019 292 aa22.99■■□□□ 1.27
FKRP-225ENST00000601299 DOT1LQ8TEK3 1739 aa22.98■■□□□ 1.27
FKRP-225ENST00000601299 BTAF1O14981 1849 aa22.98■■□□□ 1.27
FKRP-225ENST00000601299 KCNQ4P56696 695 aa22.97■■□□□ 1.27
FKRP-225ENST00000601299 NCAPD2Q15021 1401 aa22.97■■□□□ 1.27
FKRP-225ENST00000601299 MTHFSP49914 203 aa22.96■■□□□ 1.27
FKRP-225ENST00000601299 NPC1L1Q9UHC9 1359 aa22.96■■□□□ 1.27
FKRP-225ENST00000601299 IGSF1Q8N6C5 1336 aa22.95■■□□□ 1.26
FKRP-225ENST00000601299 SGIP1Q9BQI5 828 aa22.95■■□□□ 1.26
FKRP-225ENST00000601299 FHDC1Q9C0D6 1143 aaPredicted RBP22.95■■□□□ 1.26
FKRP-225ENST00000601299 SLC27A3Q5K4L6 730 aa22.94■■□□□ 1.26
FKRP-225ENST00000601299 PKD1L3Q7Z443 1732 aa22.94■■□□□ 1.26
FKRP-225ENST00000601299 CYP27B1O15528 508 aa22.93■■□□□ 1.26
FKRP-225ENST00000601299 AKT1S1Q96B36 256 aa22.93■■□□□ 1.26
FKRP-225ENST00000601299 SYT17Q9BSW7 474 aa22.93■■□□□ 1.26
FKRP-225ENST00000601299 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.93■■□□□ 1.26
FKRP-225ENST00000601299 PAPPAQ13219 1627 aa22.91■■□□□ 1.26
FKRP-225ENST00000601299 IL13P35225 146 aa22.9■■□□□ 1.26
FKRP-225ENST00000601299 SULT6B1Q6IMI4 303 aa22.9■■□□□ 1.26
FKRP-225ENST00000601299 IFNL2Q8IZJ0 200 aa22.9■■□□□ 1.26
FKRP-225ENST00000601299 ARXQ96QS3 562 aa22.9■■□□□ 1.26
FKRP-225ENST00000601299 PLEKHO1Q53GL0 409 aaPredicted RBP22.89■■□□□ 1.25
FKRP-225ENST00000601299 MPRIPQ6WCQ1 1025 aa22.89■■□□□ 1.25
FKRP-225ENST00000601299 DIAPH1O60610 1272 aaKnown RBP22.88■■□□□ 1.25
FKRP-225ENST00000601299 AEBP1Q8IUX7 1158 aa22.88■■□□□ 1.25
FKRP-225ENST00000601299 TFCP2L1Q9NZI6 479 aa22.88■■□□□ 1.25
FKRP-225ENST00000601299 PNPLA7Q6ZV29 1317 aa22.86■■□□□ 1.25
FKRP-225ENST00000601299 PHKG2P15735 406 aa22.86■■□□□ 1.25
FKRP-225ENST00000601299 AMOTQ4VCS5 1084 aa22.86■■□□□ 1.25
FKRP-225ENST00000601299 PLEKHG2Q9H7P9 1386 aa22.86■■□□□ 1.25
FKRP-225ENST00000601299 NKX1-1Q15270 411 aaPredicted RBP22.85■■□□□ 1.25
FKRP-225ENST00000601299 ZNF530Q6P9A1 599 aaPredicted RBP22.85■■□□□ 1.25
FKRP-225ENST00000601299 CCNL1Q9UK58 526 aaPredicted RBP22.85■■□□□ 1.25
FKRP-225ENST00000601299 C1orf141Q5JVX7 400 aa22.84■■□□□ 1.25
FKRP-225ENST00000601299 SLC16A10Q8TF71 515 aa22.84■■□□□ 1.25
FKRP-225ENST00000601299 CFAP53Q96M91 514 aa22.84■■□□□ 1.25
FKRP-225ENST00000601299 HSP90AB1P08238 724 aaKnown RBP22.83■■□□□ 1.25
FKRP-225ENST00000601299 HMOX1P09601 288 aa22.83■■□□□ 1.25
FKRP-225ENST00000601299 ZEB1P37275 1124 aaPredicted RBP22.83■■□□□ 1.25
FKRP-225ENST00000601299 TMOD3Q9NYL9 352 aa22.83■■□□□ 1.25
FKRP-225ENST00000601299 U2SURPO15042 1029 aaKnown RBP22.82■■□□□ 1.24
FKRP-225ENST00000601299 ITGB4P16144 1822 aa22.82■■□□□ 1.24
FKRP-225ENST00000601299 TOGARAM1Q9Y4F4 1720 aa22.82■■□□□ 1.24
FKRP-225ENST00000601299 KDRP35968 1356 aa22.81■■□□□ 1.24
FKRP-225ENST00000601299 KLHL34Q8N239 644 aa22.81■■□□□ 1.24
FKRP-225ENST00000601299 POLD1P28340 1107 aa22.8■■□□□ 1.24
FKRP-225ENST00000601299 SMARCC1Q92922 1105 aaPredicted RBP22.8■■□□□ 1.24
FKRP-225ENST00000601299 PALLDQ8WX93 1383 aa22.79■■□□□ 1.24
FKRP-225ENST00000601299 MSH5O43196 834 aa22.79■■□□□ 1.24
FKRP-225ENST00000601299 PIGBQ92521 554 aa22.79■■□□□ 1.24
FKRP-225ENST00000601299 LY75O60449 1722 aa22.79■■□□□ 1.24
FKRP-225ENST00000601299 PPP2R1AP30153 589 aa22.78■■□□□ 1.24
FKRP-225ENST00000601299 DCAF5Q96JK2 942 aa22.78■■□□□ 1.24
FKRP-225ENST00000601299 MAP3K5Q99683 1374 aa22.77■■□□□ 1.24
FKRP-225ENST00000601299 HMGB2P26583 209 aaKnown RBP22.77■■□□□ 1.24
FKRP-225ENST00000601299 COL23A1Q86Y22 540 aaPredicted RBP22.76■■□□□ 1.23
FKRP-225ENST00000601299 NUDCQ9Y266 331 aa22.76■■□□□ 1.23
FKRP-225ENST00000601299 COL3A1P02461 1466 aaPredicted RBP22.75■■□□□ 1.23
FKRP-225ENST00000601299 ERVV-2B6SEH9 535 aa22.75■■□□□ 1.23
FKRP-225ENST00000601299 CABP4P57796 275 aa22.75■■□□□ 1.23
FKRP-225ENST00000601299 DDX10Q13206 875 aaKnown RBP22.75■■□□□ 1.23
FKRP-225ENST00000601299 GPR162Q16538 588 aa22.74■■□□□ 1.23
FKRP-225ENST00000601299 MSL1Q68DK7 614 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms