RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 HSP90AB2PQ58FF8 381 aa25.14■■□□□ 1.62
CHMP2A-208ENST00000601220 SYT17Q9BSW7 474 aa25.14■■□□□ 1.62
CHMP2A-208ENST00000601220 FHDC1Q9C0D6 1143 aaPredicted RBP25.14■■□□□ 1.62
CHMP2A-208ENST00000601220 USHBP1Q8N6Y0 703 aa25.13■■□□□ 1.61
CHMP2A-208ENST00000601220 TIMELESSQ9UNS1 1208 aa25.13■■□□□ 1.61
CHMP2A-208ENST00000601220 INSRP06213 1382 aa25.13■■□□□ 1.61
CHMP2A-208ENST00000601220 RGPD2P0DJD1 1756 aa25.13■■□□□ 1.61
CHMP2A-208ENST00000601220 SHANK3Q9BYB0 1731 aa25.12■■□□□ 1.61
CHMP2A-208ENST00000601220 CGNL1Q0VF96 1302 aa25.12■■□□□ 1.61
CHMP2A-208ENST00000601220 DCAF8L1A6NGE4 600 aa25.11■■□□□ 1.61
CHMP2A-208ENST00000601220 KCNQ4P56696 695 aa25.11■■□□□ 1.61
CHMP2A-208ENST00000601220 SYTL4Q96C24 671 aaPredicted RBP25.11■■□□□ 1.61
CHMP2A-208ENST00000601220 KIF24Q5T7B8 1368 aa25.1■■□□□ 1.61
CHMP2A-208ENST00000601220 PNPLA7Q6ZV29 1317 aa25.09■■□□□ 1.61
CHMP2A-208ENST00000601220 FLT4P35916 1363 aa25.08■■□□□ 1.61
CHMP2A-208ENST00000601220 ARXQ96QS3 562 aa25.08■■□□□ 1.61
CHMP2A-208ENST00000601220 SMG6Q86US8 1419 aaKnown RBP25.06■■□□□ 1.6
CHMP2A-208ENST00000601220 NSD3Q9BZ95 1437 aa25.06■■□□□ 1.6
CHMP2A-208ENST00000601220 SLC16A10Q8TF71 515 aa25.06■■□□□ 1.6
CHMP2A-208ENST00000601220 RAPGEF4Q8WZA2 1011 aa25.06■■□□□ 1.6
CHMP2A-208ENST00000601220 EMILIN1Q9Y6C2 1016 aa25.06■■□□□ 1.6
CHMP2A-208ENST00000601220 DOT1LQ8TEK3 1739 aa25.06■■□□□ 1.6
CHMP2A-208ENST00000601220 MAP3K5Q99683 1374 aa25.05■■□□□ 1.6
CHMP2A-208ENST00000601220 TATP17735 454 aaPredicted RBP25.05■■□□□ 1.6
CHMP2A-208ENST00000601220 UTRNP46939 3433 aa25.05■■□□□ 1.6
CHMP2A-208ENST00000601220 KAT6BQ8WYB5 2073 aa25.05■■□□□ 1.6
CHMP2A-208ENST00000601220 CLSPNQ9HAW4 1339 aa25.04■■□□□ 1.6
CHMP2A-208ENST00000601220 KIF20BQ96Q89 1820 aa25.02■■□□□ 1.6
CHMP2A-208ENST00000601220 TFCP2L1Q9NZI6 479 aa25.02■■□□□ 1.6
CHMP2A-208ENST00000601220 CCNL1Q9UK58 526 aaPredicted RBP25.02■■□□□ 1.6
CHMP2A-208ENST00000601220 LY75O60449 1722 aa25.02■■□□□ 1.6
CHMP2A-208ENST00000601220 CYP27B1O15528 508 aa25.01■■□□□ 1.59
CHMP2A-208ENST00000601220 NCAPD2Q15021 1401 aa25.01■■□□□ 1.59
CHMP2A-208ENST00000601220 QSER1Q2KHR3 1735 aa25■■□□□ 1.59
CHMP2A-208ENST00000601220 PCDH11XQ9BZA7 1347 aa25■■□□□ 1.59
CHMP2A-208ENST00000601220 PCDH11YQ9BZA8 1340 aa25■■□□□ 1.59
CHMP2A-208ENST00000601220 COL24A1Q17RW2 1714 aa24.98■■□□□ 1.59
CHMP2A-208ENST00000601220 WASHC2AQ641Q2 1341 aa24.98■■□□□ 1.59
CHMP2A-208ENST00000601220 PCGF6Q9BYE7 350 aa24.97■■□□□ 1.59
CHMP2A-208ENST00000601220 POLKQ9UBT6 870 aa24.96■■□□□ 1.59
CHMP2A-208ENST00000601220 NKX1-1Q15270 411 aaPredicted RBP24.95■■□□□ 1.58
CHMP2A-208ENST00000601220 COL23A1Q86Y22 540 aaPredicted RBP24.95■■□□□ 1.58
CHMP2A-208ENST00000601220 TUBGCP6Q96RT7 1819 aa24.95■■□□□ 1.58
CHMP2A-208ENST00000601220 POLD1P28340 1107 aa24.94■■□□□ 1.58
CHMP2A-208ENST00000601220 EYA1Q99502 592 aa24.94■■□□□ 1.58
CHMP2A-208ENST00000601220 PPM1GO15355 546 aaPredicted RBP24.93■■□□□ 1.58
CHMP2A-208ENST00000601220 MPRIPQ6WCQ1 1025 aa24.93■■□□□ 1.58
CHMP2A-208ENST00000601220 ANKRD26Q9UPS8 1709 aa24.92■■□□□ 1.58
CHMP2A-208ENST00000601220 PALLDQ8WX93 1383 aa24.92■■□□□ 1.58
CHMP2A-208ENST00000601220 ZNF784Q8NCA9 323 aaPredicted RBP24.91■■□□□ 1.58
CHMP2A-208ENST00000601220 PIGBQ92521 554 aa24.9■■□□□ 1.58
CHMP2A-208ENST00000601220 PKD1L3Q7Z443 1732 aa24.89■■□□□ 1.58
CHMP2A-208ENST00000601220 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.89■■□□□ 1.58
CHMP2A-208ENST00000601220 TOGARAM1Q9Y4F4 1720 aa24.89■■□□□ 1.57
CHMP2A-208ENST00000601220 NLGN2Q8NFZ4 835 aa24.88■■□□□ 1.57
CHMP2A-208ENST00000601220 SPG7Q9UQ90 795 aa24.88■■□□□ 1.57
CHMP2A-208ENST00000601220 HSPA5P11021 654 aaKnown RBP24.86■■□□□ 1.57
CHMP2A-208ENST00000601220 EIF4A2Q14240 407 aaKnown RBP24.86■■□□□ 1.57
CHMP2A-208ENST00000601220 SMARCC1Q92922 1105 aaPredicted RBP24.86■■□□□ 1.57
CHMP2A-208ENST00000601220 EIF4G2P78344 907 aaKnown RBP eCLIP24.85■■□□□ 1.57
CHMP2A-208ENST00000601220 GPR162Q16538 588 aa24.85■■□□□ 1.57
CHMP2A-208ENST00000601220 AMIGO3Q86WK7 504 aa24.85■■□□□ 1.57
CHMP2A-208ENST00000601220 KLHL34Q8N239 644 aa24.85■■□□□ 1.57
CHMP2A-208ENST00000601220 POLR3GLQ9BT43 218 aa24.85■■□□□ 1.57
CHMP2A-208ENST00000601220 MSH5O43196 834 aa24.84■■□□□ 1.57
CHMP2A-208ENST00000601220 C5P01031 1676 aa24.84■■□□□ 1.57
CHMP2A-208ENST00000601220 PHKG2P15735 406 aa24.83■■□□□ 1.57
CHMP2A-208ENST00000601220 HMGB2P26583 209 aaKnown RBP24.83■■□□□ 1.57
CHMP2A-208ENST00000601220 TNNT2P45379 298 aaPredicted RBP24.83■■□□□ 1.57
CHMP2A-208ENST00000601220 MSL1Q68DK7 614 aa24.83■■□□□ 1.57
CHMP2A-208ENST00000601220 PANK3Q9H999 370 aa24.83■■□□□ 1.57
CHMP2A-208ENST00000601220 MAP2P11137 1827 aaKnown RBP24.82■■□□□ 1.56
CHMP2A-208ENST00000601220 FLAD1Q8NFF5 587 aa24.82■■□□□ 1.56
CHMP2A-208ENST00000601220 ITGB4P16144 1822 aa24.81■■□□□ 1.56
CHMP2A-208ENST00000601220 IFNL2Q8IZJ0 200 aa24.8■■□□□ 1.56
CHMP2A-208ENST00000601220 LOC102724428A0A0B4J2F2 783 aa24.79■■□□□ 1.56
CHMP2A-208ENST00000601220 SIK1P57059 783 aa24.79■■□□□ 1.56
CHMP2A-208ENST00000601220 ASAP1Q9ULH1 1129 aa24.79■■□□□ 1.56
CHMP2A-208ENST00000601220 IGSF1Q8N6C5 1336 aa24.79■■□□□ 1.56
CHMP2A-208ENST00000601220 TAF1LQ8IZX4 1826 aa24.79■■□□□ 1.56
CHMP2A-208ENST00000601220 SMIM5Q71RC9 77 aa24.78■■□□□ 1.56
CHMP2A-208ENST00000601220 LINC00116Q8NCU8 138 aa24.78■■□□□ 1.56
CHMP2A-208ENST00000601220 PLEKHG2Q9H7P9 1386 aa24.78■■□□□ 1.56
CHMP2A-208ENST00000601220 C4BP0C0L5 1744 aa24.78■■□□□ 1.56
CHMP2A-208ENST00000601220 YBX3P16989 372 aaKnown RBP eCLIP24.77■■□□□ 1.561e-11■□□□□ 11
CHMP2A-208ENST00000601220 TMOD3Q9NYL9 352 aa24.77■■□□□ 1.56
CHMP2A-208ENST00000601220 ITPK1Q13572 414 aa24.76■■□□□ 1.55
CHMP2A-208ENST00000601220 AK7Q96M32 723 aa24.76■■□□□ 1.55
CHMP2A-208ENST00000601220 GOLGB1Q14789 3259 aaKnown RBP24.76■■□□□ 1.55
CHMP2A-208ENST00000601220 PELP1Q8IZL8 1130 aaKnown RBP24.75■■□□□ 1.55
CHMP2A-208ENST00000601220 ATG3Q9NT62 314 aa24.75■■□□□ 1.55
CHMP2A-208ENST00000601220 CHD4Q14839 1912 aa24.74■■□□□ 1.55
CHMP2A-208ENST00000601220 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.74■■□□□ 1.55
CHMP2A-208ENST00000601220 CD2APQ9Y5K6 639 aa24.74■■□□□ 1.55
CHMP2A-208ENST00000601220 SSFA2P28290 1259 aa24.72■■□□□ 1.55
CHMP2A-208ENST00000601220 PHF14O94880 888 aa24.71■■□□□ 1.55
CHMP2A-208ENST00000601220 ATP6V1AP38606 617 aa24.71■■□□□ 1.55
CHMP2A-208ENST00000601220 CCER1Q8TC90 406 aaPredicted RBP24.71■■□□□ 1.55
CHMP2A-208ENST00000601220 ERVV-2B6SEH9 535 aa24.7■■□□□ 1.54
CHMP2A-208ENST00000601220 SLC4A9Q96Q91 983 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms