RNA–Protein interactions for RNA: ENST00000601009.1

FARP1-232, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-232ENST00000601009 TATP17735 454 aaPredicted RBP12.68□□□□□ -0.38
FARP1-232ENST00000601009 SYTL4Q96C24 671 aaPredicted RBP12.68□□□□□ -0.38
FARP1-232ENST00000601009 POLR3GLQ9BT43 218 aa12.68□□□□□ -0.38
FARP1-232ENST00000601009 MEGF6O75095 1541 aa12.67□□□□□ -0.38
FARP1-232ENST00000601009 NBPF6Q5VWK0 638 aa12.67□□□□□ -0.38
FARP1-232ENST00000601009 NBPF4Q96M43 638 aa12.67□□□□□ -0.38
FARP1-232ENST00000601009 CARD14Q9BXL6 1004 aa12.67□□□□□ -0.38
FARP1-232ENST00000601009 DOT1LQ8TEK3 1739 aa12.67□□□□□ -0.38
FARP1-232ENST00000601009 PCDH11XQ9BZA7 1347 aa12.66□□□□□ -0.38
FARP1-232ENST00000601009 PCDH11YQ9BZA8 1340 aa12.66□□□□□ -0.38
FARP1-232ENST00000601009 ZBTB7AO95365 584 aa12.66□□□□□ -0.38
FARP1-232ENST00000601009 HSP90AB2PQ58FF8 381 aa12.66□□□□□ -0.38
FARP1-232ENST00000601009 MTFR1LQ9H019 292 aa12.66□□□□□ -0.38
FARP1-232ENST00000601009 PAPPAQ13219 1627 aa12.66□□□□□ -0.38
FARP1-232ENST00000601009 SHANK3Q9BYB0 1731 aa12.65□□□□□ -0.38
FARP1-232ENST00000601009 PPM1GO15355 546 aaPredicted RBP12.65□□□□□ -0.38
FARP1-232ENST00000601009 PRIM1P49642 420 aaKnown RBP12.65□□□□□ -0.38
FARP1-232ENST00000601009 USHBP1Q8N6Y0 703 aa12.65□□□□□ -0.38
FARP1-232ENST00000601009 ANKRD26Q9UPS8 1709 aa12.65□□□□□ -0.38
FARP1-232ENST00000601009 EMILIN1Q9Y6C2 1016 aa12.64□□□□□ -0.39
FARP1-232ENST00000601009 MAP2P11137 1827 aaKnown RBP12.63□□□□□ -0.39
FARP1-232ENST00000601009 HSPA5P11021 654 aaKnown RBP12.63□□□□□ -0.39
FARP1-232ENST00000601009 ATF5Q9Y2D1 282 aaPredicted RBP12.63□□□□□ -0.39
FARP1-232ENST00000601009 NSD2O96028 1365 aa12.63□□□□□ -0.39
FARP1-232ENST00000601009 WASHC2AQ641Q2 1341 aa12.62□□□□□ -0.39
FARP1-232ENST00000601009 LY75O60449 1722 aa12.62□□□□□ -0.39
FARP1-232ENST00000601009 QSER1Q2KHR3 1735 aa12.62□□□□□ -0.39
FARP1-232ENST00000601009 SLC16A10Q8TF71 515 aa12.62□□□□□ -0.39
FARP1-232ENST00000601009 PDGFDQ9GZP0 370 aaPredicted RBP12.62□□□□□ -0.39
FARP1-232ENST00000601009 LRRC4BQ9NT99 713 aa12.62□□□□□ -0.39
FARP1-232ENST00000601009 SPG7Q9UQ90 795 aa12.62□□□□□ -0.39
FARP1-232ENST00000601009 PTGER2P43116 358 aa12.61□□□□□ -0.39
FARP1-232ENST00000601009 ZNF827Q17R98 1081 aa12.61□□□□□ -0.39
FARP1-232ENST00000601009 TFCP2L1Q9NZI6 479 aa12.61□□□□□ -0.39
FARP1-232ENST00000601009 CCNL1Q9UK58 526 aaPredicted RBP12.61□□□□□ -0.39
FARP1-232ENST00000601009 PKD1L3Q7Z443 1732 aa12.6□□□□□ -0.39
FARP1-232ENST00000601009 PLEKHG2Q9H7P9 1386 aa12.6□□□□□ -0.39
FARP1-232ENST00000601009 POLD1P28340 1107 aa12.6□□□□□ -0.39
FARP1-232ENST00000601009 AKT1S1Q96B36 256 aa12.6□□□□□ -0.39
FARP1-232ENST00000601009 NCAPD2Q15021 1401 aa12.6□□□□□ -0.39
FARP1-232ENST00000601009 ARXQ96QS3 562 aa12.59□□□□□ -0.39
FARP1-232ENST00000601009 PANK3Q9H999 370 aa12.59□□□□□ -0.39
FARP1-232ENST00000601009 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.59□□□□□ -0.396e-20■□□□□ 8.7
FARP1-232ENST00000601009 POLKQ9UBT6 870 aa12.59□□□□□ -0.39
FARP1-232ENST00000601009 TNNT2P45379 298 aaPredicted RBP12.58□□□□□ -0.4
FARP1-232ENST00000601009 SMARCC1Q92922 1105 aaPredicted RBP12.58□□□□□ -0.4
FARP1-232ENST00000601009 CYP27B1O15528 508 aa12.57□□□□□ -0.4
FARP1-232ENST00000601009 YY1P25490 414 aa12.57□□□□□ -0.4
FARP1-232ENST00000601009 MPRIPQ6WCQ1 1025 aa12.57□□□□□ -0.4
FARP1-232ENST00000601009 EYA1Q99502 592 aa12.57□□□□□ -0.4
FARP1-232ENST00000601009 SGIP1Q9BQI5 828 aa12.57□□□□□ -0.4
FARP1-232ENST00000601009 FHDC1Q9C0D6 1143 aaPredicted RBP12.57□□□□□ -0.4
FARP1-232ENST00000601009 KNSTRNQ9Y448 316 aa12.57□□□□□ -0.4
FARP1-232ENST00000601009 PALLDQ8WX93 1383 aa12.56□□□□□ -0.4
FARP1-232ENST00000601009 MAP3K5Q99683 1374 aa12.56□□□□□ -0.4
FARP1-232ENST00000601009 IFNL2Q8IZJ0 200 aa12.56□□□□□ -0.4
FARP1-232ENST00000601009 FLAD1Q8NFF5 587 aa12.56□□□□□ -0.4
FARP1-232ENST00000601009 SYT17Q9BSW7 474 aa12.56□□□□□ -0.4
FARP1-232ENST00000601009 PNPLA7Q6ZV29 1317 aa12.56□□□□□ -0.4
FARP1-232ENST00000601009 UTRNP46939 3433 aa12.56□□□□□ -0.4
FARP1-232ENST00000601009 ITGB4P16144 1822 aa12.55□□□□□ -0.4
FARP1-232ENST00000601009 TUBGCP6Q96RT7 1819 aa12.55□□□□□ -0.4
FARP1-232ENST00000601009 C5P01031 1676 aa12.55□□□□□ -0.4
FARP1-232ENST00000601009 MSH5O43196 834 aa12.55□□□□□ -0.4
FARP1-232ENST00000601009 EIF4A2Q14240 407 aaKnown RBP12.55□□□□□ -0.4
FARP1-232ENST00000601009 NKX1-1Q15270 411 aaPredicted RBP12.55□□□□□ -0.4
FARP1-232ENST00000601009 MORC1Q86VD1 984 aa12.55□□□□□ -0.4
FARP1-232ENST00000601009 HSP90AB1P08238 724 aaKnown RBP12.54□□□□□ -0.4
FARP1-232ENST00000601009 KCNQ4P56696 695 aa12.54□□□□□ -0.4
FARP1-232ENST00000601009 TMOD3Q9NYL9 352 aa12.54□□□□□ -0.4
FARP1-232ENST00000601009 TOGARAM1Q9Y4F4 1720 aa12.54□□□□□ -0.4
FARP1-232ENST00000601009 IGSF1Q8N6C5 1336 aa12.53□□□□□ -0.4
FARP1-232ENST00000601009 COL24A1Q17RW2 1714 aa12.53□□□□□ -0.4
FARP1-232ENST00000601009 PHKG2P15735 406 aa12.52□□□□□ -0.41
FARP1-232ENST00000601009 KLHL34Q8N239 644 aa12.52□□□□□ -0.41
FARP1-232ENST00000601009 AK7Q96M32 723 aa12.52□□□□□ -0.41
FARP1-232ENST00000601009 TAF1LQ8IZX4 1826 aa12.52□□□□□ -0.41
FARP1-232ENST00000601009 AMOTQ4VCS5 1084 aa12.51□□□□□ -0.41
FARP1-232ENST00000601009 PLEKHO1Q53GL0 409 aaPredicted RBP12.51□□□□□ -0.41
FARP1-232ENST00000601009 PIGBQ92521 554 aa12.51□□□□□ -0.41
FARP1-232ENST00000601009 C4BP0C0L5 1744 aa12.5□□□□□ -0.41
FARP1-232ENST00000601009 GOLGB1Q14789 3259 aaKnown RBP12.5□□□□□ -0.41
FARP1-232ENST00000601009 CHD4Q14839 1912 aa12.49□□□□□ -0.41
FARP1-232ENST00000601009 KIF7Q2M1P5 1343 aa12.49□□□□□ -0.41
FARP1-232ENST00000601009 LOC102724428A0A0B4J2F2 783 aa12.49□□□□□ -0.41
FARP1-232ENST00000601009 ERVV-2B6SEH9 535 aa12.49□□□□□ -0.41
FARP1-232ENST00000601009 SIK1P57059 783 aa12.49□□□□□ -0.41
FARP1-232ENST00000601009 GPR162Q16538 588 aa12.49□□□□□ -0.41
FARP1-232ENST00000601009 C1orf141Q5JVX7 400 aa12.49□□□□□ -0.41
FARP1-232ENST00000601009 COL23A1Q86Y22 540 aaPredicted RBP12.49□□□□□ -0.41
FARP1-232ENST00000601009 DCAF5Q96JK2 942 aa12.49□□□□□ -0.41
FARP1-232ENST00000601009 SSFA2P28290 1259 aa12.47□□□□□ -0.41
FARP1-232ENST00000601009 ZNF530Q6P9A1 599 aaPredicted RBP12.47□□□□□ -0.41
FARP1-232ENST00000601009 ATP6V1AP38606 617 aa12.46□□□□□ -0.41
FARP1-232ENST00000601009 AMER1Q5JTC6 1135 aaPredicted RBP12.46□□□□□ -0.41
FARP1-232ENST00000601009 ASAP1Q9ULH1 1129 aa12.46□□□□□ -0.41
FARP1-232ENST00000601009 UBR3Q6ZT12 1888 aa12.46□□□□□ -0.42
FARP1-232ENST00000601009 KDRP35968 1356 aa12.45□□□□□ -0.42
FARP1-232ENST00000601009 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.45□□□□□ -0.42
FARP1-232ENST00000601009 PHF14O94880 888 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms