RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 MBIPQ9NS73 344 aa25.79■■□□□ 1.72
PNKP-214ENST00000600573 CRYBG1Q9Y4K1 1723 aa25.79■■□□□ 1.72
PNKP-214ENST00000600573 C20orf194Q5TEA3 1177 aa25.78■■□□□ 1.72
PNKP-214ENST00000600573 KIAA0232Q92628 1395 aa25.77■■□□□ 1.72
PNKP-214ENST00000600573 MAP3K5Q99683 1374 aa25.77■■□□□ 1.72
PNKP-214ENST00000600573 CANXP27824 592 aaKnown RBP25.77■■□□□ 1.72
PNKP-214ENST00000600573 DCTN1Q14203 1278 aa25.77■■□□□ 1.72
PNKP-214ENST00000600573 USHBP1Q8N6Y0 703 aa25.77■■□□□ 1.72
PNKP-214ENST00000600573 CAMTA1Q9Y6Y1 1673 aa25.77■■□□□ 1.72
PNKP-214ENST00000600573 BRPF1P55201 1214 aaPredicted RBP25.76■■□□□ 1.71
PNKP-214ENST00000600573 MCM10Q7L590 875 aa25.76■■□□□ 1.71
PNKP-214ENST00000600573 ILDR1Q86SU0 546 aaPredicted RBP25.76■■□□□ 1.71
PNKP-214ENST00000600573 CRB1P82279 1406 aa25.76■■□□□ 1.71
PNKP-214ENST00000600573 COL18A1P39060 1754 aa25.75■■□□□ 1.71
PNKP-214ENST00000600573 AAMPQ13685 434 aa25.74■■□□□ 1.71
PNKP-214ENST00000600573 AHDC1Q5TGY3 1603 aaPredicted RBP25.74■■□□□ 1.71
PNKP-214ENST00000600573 TOM1O60784 492 aa25.74■■□□□ 1.71
PNKP-214ENST00000600573 AKAP4Q5JQC9 854 aa25.74■■□□□ 1.71
PNKP-214ENST00000600573 VAMP4O75379 141 aa25.73■■□□□ 1.71
PNKP-214ENST00000600573 PRDM11Q9NQV5 511 aa25.73■■□□□ 1.71
PNKP-214ENST00000600573 IPO8O15397 1037 aaKnown RBP25.72■■□□□ 1.71
PNKP-214ENST00000600573 CSB-PGBD3P0DP91 1061 aa25.72■■□□□ 1.71
PNKP-214ENST00000600573 SMC4Q9NTJ3 1288 aa25.72■■□□□ 1.71
PNKP-214ENST00000600573 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.72■■□□□ 1.71
PNKP-214ENST00000600573 NLRP2Q9NX02 1062 aa25.71■■□□□ 1.71
PNKP-214ENST00000600573 LMO7Q8WWI1 1683 aa25.71■■□□□ 1.71
PNKP-214ENST00000600573 FAM208AQ9UK61 1670 aaKnown RBP25.71■■□□□ 1.71
PNKP-214ENST00000600573 ZKSCAN2Q63HK3 967 aa25.7■■□□□ 1.71
PNKP-214ENST00000600573 RAPGEF4Q8WZA2 1011 aa25.7■■□□□ 1.71
PNKP-214ENST00000600573 KIF16BQ96L93 1317 aa25.7■■□□□ 1.7
PNKP-214ENST00000600573 TWISTNBQ3B726 338 aaPredicted RBP25.7■■□□□ 1.7
PNKP-214ENST00000600573 SSH1Q8WYL5 1049 aa25.7■■□□□ 1.7
PNKP-214ENST00000600573 SOS1Q07889 1333 aaPredicted RBP25.69■■□□□ 1.7
PNKP-214ENST00000600573 CHRNA2Q15822 529 aa25.69■■□□□ 1.7
PNKP-214ENST00000600573 FRAT1Q92837 279 aaPredicted RBP25.69■■□□□ 1.7
PNKP-214ENST00000600573 ROBO1Q9Y6N7 1651 aa25.69■■□□□ 1.7
PNKP-214ENST00000600573 TATP17735 454 aaPredicted RBP25.68■■□□□ 1.7
PNKP-214ENST00000600573 C1orf141Q5JVX7 400 aa25.68■■□□□ 1.7
PNKP-214ENST00000600573 TAF7Q15545 349 aaPredicted RBP25.67■■□□□ 1.7
PNKP-214ENST00000600573 ZNF530Q6P9A1 599 aaPredicted RBP25.67■■□□□ 1.7
PNKP-214ENST00000600573 IL17REQ8NFR9 667 aa25.67■■□□□ 1.7
PNKP-214ENST00000600573 CERKQ8TCT0 537 aa25.67■■□□□ 1.7
PNKP-214ENST00000600573 TSPYL4Q9UJ04 414 aa25.66■■□□□ 1.7
PNKP-214ENST00000600573 CEMIPQ8WUJ3 1361 aa25.66■■□□□ 1.7
PNKP-214ENST00000600573 OVOS2A0A0G2JMS6 1433 aa25.66■■□□□ 1.7
PNKP-214ENST00000600573 ARHGAP45Q92619 1136 aa25.66■■□□□ 1.7
PNKP-214ENST00000600573 SPG7Q9UQ90 795 aa25.66■■□□□ 1.7
PNKP-214ENST00000600573 WDR17Q8IZU2 1322 aa25.66■■□□□ 1.7
PNKP-214ENST00000600573 C8orf58Q8NAV2 365 aa25.64■■□□□ 1.7
PNKP-214ENST00000600573 RGPD2P0DJD1 1756 aa25.64■■□□□ 1.69
PNKP-214ENST00000600573 RGPD5Q99666 1765 aa25.64■■□□□ 1.69
PNKP-214ENST00000600573 BCL2L13Q9BXK5 485 aa25.63■■□□□ 1.69
PNKP-214ENST00000600573 CHMP4AQ9BY43 222 aa25.63■■□□□ 1.69
PNKP-214ENST00000600573 LRRC37A3O60309 1634 aa25.63■■□□□ 1.69
PNKP-214ENST00000600573 ATF7IPQ6VMQ6 1270 aa25.62■■□□□ 1.69
PNKP-214ENST00000600573 DZIP1LQ8IYY4 767 aaKnown RBP25.62■■□□□ 1.69
PNKP-214ENST00000600573 TSPYL6Q8N831 410 aa25.62■■□□□ 1.69
PNKP-214ENST00000600573 ABCA3Q99758 1704 aa25.6■■□□□ 1.69
PNKP-214ENST00000600573 MRPL50Q8N5N7 158 aaKnown RBP25.6■■□□□ 1.69
PNKP-214ENST00000600573 NOB1Q9ULX3 412 aaKnown RBP25.6■■□□□ 1.69
PNKP-214ENST00000600573 COL22A1Q8NFW1 1626 aaPredicted RBP25.6■■□□□ 1.69
PNKP-214ENST00000600573 FTSJ3Q8IY81 847 aaKnown RBP25.59■■□□□ 1.69
PNKP-214ENST00000600573 CARD10Q9BWT7 1032 aa25.59■■□□□ 1.69
PNKP-214ENST00000600573 COL5A2P05997 1499 aaPredicted RBP25.59■■□□□ 1.69
PNKP-214ENST00000600573 UBAP1LF5GYI3 381 aa25.59■■□□□ 1.69
PNKP-214ENST00000600573 EVA1CP58658 441 aa25.59■■□□□ 1.69
PNKP-214ENST00000600573 RNMTO43148 476 aaKnown RBP25.58■■□□□ 1.69
PNKP-214ENST00000600573 HSP90AB1P08238 724 aaKnown RBP25.58■■□□□ 1.69
PNKP-214ENST00000600573 TEFQ10587 303 aa25.58■■□□□ 1.69
PNKP-214ENST00000600573 TOM1L2Q6ZVM7 507 aa25.58■■□□□ 1.69
PNKP-214ENST00000600573 PANK1Q8TE04 598 aa25.57■■□□□ 1.68
PNKP-214ENST00000600573 ELL2O00472 640 aaPredicted RBP25.56■■□□□ 1.68
PNKP-214ENST00000600573 IFNL2Q8IZJ0 200 aa25.56■■□□□ 1.68
PNKP-214ENST00000600573 CHMP4BQ9H444 224 aaKnown RBP25.56■■□□□ 1.68
PNKP-214ENST00000600573 KDM2BQ8NHM5 1336 aa25.56■■□□□ 1.68
PNKP-214ENST00000600573 TRIM27P14373 513 aa25.55■■□□□ 1.68
PNKP-214ENST00000600573 CENPQQ7L2Z9 268 aaPredicted RBP25.55■■□□□ 1.68
PNKP-214ENST00000600573 MVPQ14764 893 aaKnown RBP25.55■■□□□ 1.68
PNKP-214ENST00000600573 API5Q9BZZ5 524 aaKnown RBP25.55■■□□□ 1.68
PNKP-214ENST00000600573 LGR6Q9HBX8 967 aa25.55■■□□□ 1.68
PNKP-214ENST00000600573 COG6Q9Y2V7 657 aa25.55■■□□□ 1.68
PNKP-214ENST00000600573 PIP4K2BP78356 416 aa25.54■■□□□ 1.68
PNKP-214ENST00000600573 MIS18AQ9NYP9 233 aa25.54■■□□□ 1.68
PNKP-214ENST00000600573 HOXB7P09629 217 aa25.53■■□□□ 1.68
PNKP-214ENST00000600573 DDX19BQ9UMR2 479 aa25.53■■□□□ 1.68
PNKP-214ENST00000600573 PHKG2P15735 406 aa25.52■■□□□ 1.68
PNKP-214ENST00000600573 MPRIPQ6WCQ1 1025 aa25.52■■□□□ 1.68
PNKP-214ENST00000600573 CLUAP1Q96AJ1 413 aa25.52■■□□□ 1.68
PNKP-214ENST00000600573 MEGF6O75095 1541 aa25.51■■□□□ 1.67
PNKP-214ENST00000600573 BTBD11A6QL63 1104 aa25.5■■□□□ 1.67
PNKP-214ENST00000600573 RLBP1P12271 317 aa25.5■■□□□ 1.67
PNKP-214ENST00000600573 DCAF5Q96JK2 942 aa25.5■■□□□ 1.67
PNKP-214ENST00000600573 PHLPP1O60346 1717 aa25.5■■□□□ 1.67
PNKP-214ENST00000600573 COL14A1Q05707 1796 aaKnown RBP25.5■■□□□ 1.67
PNKP-214ENST00000600573 PTPRCP08575 1304 aa25.5■■□□□ 1.67
PNKP-214ENST00000600573 COL16A1Q07092 1604 aaPredicted RBP25.49■■□□□ 1.67
PNKP-214ENST00000600573 IL2RBP14784 551 aa25.49■■□□□ 1.67
PNKP-214ENST00000600573 CCDC30Q5VVM6 783 aa25.49■■□□□ 1.67
PNKP-214ENST00000600573 ADAMTS7Q9UKP4 1686 aa25.48■■□□□ 1.67
PNKP-214ENST00000600573 TNNQ9UQP3 1299 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms