RNA–Protein interactions for RNA: ENST00000600528.1

COPE-210, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 261 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-210ENST00000600528 EDC4Q6P2E9 1401 aaKnown RBP13.3□□□□□ -0.28
COPE-210ENST00000600528 ATP10DQ9P241 1426 aa13.3□□□□□ -0.28
COPE-210ENST00000600528 TUBGCP6Q96RT7 1819 aa13.29□□□□□ -0.28
COPE-210ENST00000600528 HDGFL2Q7Z4V5 671 aaPredicted RBP13.29□□□□□ -0.28
COPE-210ENST00000600528 SYTL4Q96C24 671 aaPredicted RBP13.29□□□□□ -0.28
COPE-210ENST00000600528 CCNL1Q9UK58 526 aaPredicted RBP13.29□□□□□ -0.28
COPE-210ENST00000600528 CD2APQ9Y5K6 639 aa13.29□□□□□ -0.28
COPE-210ENST00000600528 ZCRB1Q8TBF4 217 aaKnown RBP13.28□□□□□ -0.28
COPE-210ENST00000600528 PUS7Q96PZ0 661 aaKnown RBP13.28□□□□□ -0.28
COPE-210ENST00000600528 ADCY9O60503 1353 aa13.28□□□□□ -0.28
COPE-210ENST00000600528 HSPA6P17066 643 aa13.27□□□□□ -0.29
COPE-210ENST00000600528 TMC1Q8TDI8 760 aa13.27□□□□□ -0.29
COPE-210ENST00000600528 SIN3AQ96ST3 1273 aa13.27□□□□□ -0.29
COPE-210ENST00000600528 TERF2IPQ9NYB0 399 aa13.27□□□□□ -0.29
COPE-210ENST00000600528 A0A1W2PP64 1363 aa13.26□□□□□ -0.29
COPE-210ENST00000600528 LTV1Q96GA3 475 aaPredicted RBP13.26□□□□□ -0.29
COPE-210ENST00000600528 GPBP1L1Q9HC44 474 aaPredicted RBP13.26□□□□□ -0.29
COPE-210ENST00000600528 FAM208AQ9UK61 1670 aaKnown RBP13.26□□□□□ -0.29
COPE-210ENST00000600528 MAP3K19Q56UN5 1328 aa13.25□□□□□ -0.29
COPE-210ENST00000600528 HMGB2P26583 209 aaKnown RBP13.25□□□□□ -0.29
COPE-210ENST00000600528 HOXC9P31274 260 aa13.25□□□□□ -0.29
COPE-210ENST00000600528 FLAD1Q8NFF5 587 aa13.25□□□□□ -0.29
COPE-210ENST00000600528 DOT1LQ8TEK3 1739 aa13.25□□□□□ -0.29
COPE-210ENST00000600528 MEGF6O75095 1541 aa13.24□□□□□ -0.29
COPE-210ENST00000600528 USP47Q96K76 1375 aa13.24□□□□□ -0.29
COPE-210ENST00000600528 CGNL1Q0VF96 1302 aa13.24□□□□□ -0.29
COPE-210ENST00000600528 MSH5O43196 834 aa13.24□□□□□ -0.29
COPE-210ENST00000600528 MSL1Q68DK7 614 aa13.24□□□□□ -0.29
COPE-210ENST00000600528 FBLN1P23142 703 aa13.22□□□□□ -0.29
COPE-210ENST00000600528 AMPHP49418 695 aa13.21□□□□□ -0.29
COPE-210ENST00000600528 NBPF6Q5VWK0 638 aa13.21□□□□□ -0.29
COPE-210ENST00000600528 CCER1Q8TC90 406 aaPredicted RBP13.21□□□□□ -0.29
COPE-210ENST00000600528 COG3Q96JB2 828 aa13.21□□□□□ -0.29
COPE-210ENST00000600528 NBPF4Q96M43 638 aa13.21□□□□□ -0.29
COPE-210ENST00000600528 CARD11Q9BXL7 1154 aa13.21□□□□□ -0.29
COPE-210ENST00000600528 CLSPNQ9HAW4 1339 aa13.2□□□□□ -0.3
COPE-210ENST00000600528 RTL1A6NKG5 1358 aa13.2□□□□□ -0.3
COPE-210ENST00000600528 KIF3CO14782 793 aa13.19□□□□□ -0.3
COPE-210ENST00000600528 NEUROD1Q13562 356 aa13.19□□□□□ -0.3
COPE-210ENST00000600528 PALLDQ8WX93 1383 aa13.19□□□□□ -0.3
COPE-210ENST00000600528 C5P01031 1676 aa13.18□□□□□ -0.3
COPE-210ENST00000600528 AMIGO3Q86WK7 504 aa13.18□□□□□ -0.3
COPE-210ENST00000600528 ZNF526Q8TF50 670 aaPredicted RBP13.18□□□□□ -0.3
COPE-210ENST00000600528 RGPD2P0DJD1 1756 aa13.17□□□□□ -0.3
COPE-210ENST00000600528 IGSF1Q8N6C5 1336 aa13.17□□□□□ -0.3
COPE-210ENST00000600528 TATP17735 454 aaPredicted RBP13.17□□□□□ -0.3
COPE-210ENST00000600528 RAPGEF4Q8WZA2 1011 aa13.17□□□□□ -0.3
COPE-210ENST00000600528 TESK2Q96S53 571 aa13.17□□□□□ -0.3
COPE-210ENST00000600528 PCDH11XQ9BZA7 1347 aa13.16□□□□□ -0.3
COPE-210ENST00000600528 PCDH11YQ9BZA8 1340 aa13.16□□□□□ -0.3
COPE-210ENST00000600528 ADRA2BP18089 450 aa13.16□□□□□ -0.3
COPE-210ENST00000600528 MPRIPQ6WCQ1 1025 aa13.16□□□□□ -0.3
COPE-210ENST00000600528 USHBP1Q8N6Y0 703 aa13.16□□□□□ -0.3
COPE-210ENST00000600528 SMARCC1Q92922 1105 aaPredicted RBP13.16□□□□□ -0.3
COPE-210ENST00000600528 TONSLQ96HA7 1378 aa13.16□□□□□ -0.3
COPE-210ENST00000600528 TAF1LQ8IZX4 1826 aa13.16□□□□□ -0.3
COPE-210ENST00000600528 FYB1O15117 783 aa13.15□□□□□ -0.3
COPE-210ENST00000600528 CYP27B1O15528 508 aa13.15□□□□□ -0.3
COPE-210ENST00000600528 RRS1Q15050 365 aaKnown RBP13.15□□□□□ -0.3
COPE-210ENST00000600528 DNAJC5GQ8N7S2 189 aa13.15□□□□□ -0.3
COPE-210ENST00000600528 C4BP0C0L5 1744 aa13.14□□□□□ -0.31
COPE-210ENST00000600528 TOGARAM1Q9Y4F4 1720 aa13.14□□□□□ -0.31
COPE-210ENST00000600528 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.14□□□□□ -0.31
COPE-210ENST00000600528 SSFA2P28290 1259 aa13.14□□□□□ -0.31
COPE-210ENST00000600528 APLP1P51693 650 aa13.14□□□□□ -0.31
COPE-210ENST00000600528 NKX1-1Q15270 411 aaPredicted RBP13.14□□□□□ -0.31
COPE-210ENST00000600528 AK7Q96M32 723 aa13.14□□□□□ -0.31
COPE-210ENST00000600528 INSRP06213 1382 aa13.14□□□□□ -0.31
COPE-210ENST00000600528 NSD3Q9BZ95 1437 aa13.13□□□□□ -0.31
COPE-210ENST00000600528 SLC24A1O60721 1099 aa13.13□□□□□ -0.31
COPE-210ENST00000600528 HSP90AB2PQ58FF8 381 aa13.13□□□□□ -0.31
COPE-210ENST00000600528 PIAS4Q8N2W9 510 aaPredicted RBP13.13□□□□□ -0.31
COPE-210ENST00000600528 PIGBQ92521 554 aa13.13□□□□□ -0.31
COPE-210ENST00000600528 CICQ96RK0 1608 aaPredicted RBP13.13□□□□□ -0.31
COPE-210ENST00000600528 SMG6Q86US8 1419 aaKnown RBP13.13□□□□□ -0.31
COPE-210ENST00000600528 KIF24Q5T7B8 1368 aa13.12□□□□□ -0.31
COPE-210ENST00000600528 TOMM70O94826 608 aa13.12□□□□□ -0.31
COPE-210ENST00000600528 SMIM5Q71RC9 77 aa13.12□□□□□ -0.31
COPE-210ENST00000600528 TIMELESSQ9UNS1 1208 aa13.12□□□□□ -0.31
COPE-210ENST00000600528 UBR3Q6ZT12 1888 aa13.12□□□□□ -0.31
COPE-210ENST00000600528 LINC00116Q8NCU8 138 aa13.11□□□□□ -0.31
COPE-210ENST00000600528 GGNBP2Q9H3C7 697 aa13.11□□□□□ -0.31
COPE-210ENST00000600528 WWC3Q9ULE0 1092 aa13.11□□□□□ -0.31
COPE-210ENST00000600528 ST20-MTHFSA0A0A6YYL1 179 aa13.1□□□□□ -0.31
COPE-210ENST00000600528 LOC102724428A0A0B4J2F2 783 aa13.1□□□□□ -0.31
COPE-210ENST00000600528 PHF14O94880 888 aa13.1□□□□□ -0.31
COPE-210ENST00000600528 SIK1P57059 783 aa13.1□□□□□ -0.31
COPE-210ENST00000600528 MAP2P11137 1827 aaKnown RBP13.1□□□□□ -0.31
COPE-210ENST00000600528 FLT4P35916 1363 aa13.09□□□□□ -0.31
COPE-210ENST00000600528 TGFB2P61812 414 aa13.09□□□□□ -0.31
COPE-210ENST00000600528 NCAPD2Q15021 1401 aa13.09□□□□□ -0.31
COPE-210ENST00000600528 ITPK1Q13572 414 aa13.08□□□□□ -0.32
COPE-210ENST00000600528 PXDNLA1KZ92 1463 aa13.08□□□□□ -0.32
COPE-210ENST00000600528 ITGB4P16144 1822 aa13.08□□□□□ -0.32
COPE-210ENST00000600528 MMP10P09238 476 aa13.07□□□□□ -0.32
COPE-210ENST00000600528 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.07□□□□□ -0.32
COPE-210ENST00000600528 PKD1L3Q7Z443 1732 aa13.07□□□□□ -0.32
COPE-210ENST00000600528 GNPATO15228 680 aa13.06□□□□□ -0.32
COPE-210ENST00000600528 ATP6V1AP38606 617 aa13.06□□□□□ -0.32
COPE-210ENST00000600528 ASAP1Q9ULH1 1129 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms