RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-222ENST00000600517 NCAPD2Q15021 1401 aa18.35■□□□□ 0.53
ARHGEF1-222ENST00000600517 NPC1L1Q9UHC9 1359 aa18.35■□□□□ 0.53
ARHGEF1-222ENST00000600517 ACSBG1Q96GR2 724 aa18.34■□□□□ 0.53
ARHGEF1-222ENST00000600517 CC2D1BQ5T0F9 858 aaKnown RBP18.33■□□□□ 0.52
ARHGEF1-222ENST00000600517 SBF2Q86WG5 1849 aa18.33■□□□□ 0.52
ARHGEF1-222ENST00000600517 PROM2Q8N271 834 aa18.31■□□□□ 0.52
ARHGEF1-222ENST00000600517 MTHFSP49914 203 aa18.3■□□□□ 0.52
ARHGEF1-222ENST00000600517 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.3■□□□□ 0.52
ARHGEF1-222ENST00000600517 IGSF1Q8N6C5 1336 aa18.29■□□□□ 0.52
ARHGEF1-222ENST00000600517 PCDH11XQ9BZA7 1347 aa18.29■□□□□ 0.52
ARHGEF1-222ENST00000600517 PCDH11YQ9BZA8 1340 aa18.29■□□□□ 0.52
ARHGEF1-222ENST00000600517 PSDA5PKW4 1024 aaPredicted RBP18.29■□□□□ 0.52
ARHGEF1-222ENST00000600517 PRIM1P49642 420 aaKnown RBP18.29■□□□□ 0.52
ARHGEF1-222ENST00000600517 NBPF14Q5TI25 921 aa18.29■□□□□ 0.52
ARHGEF1-222ENST00000600517 CYP27B1O15528 508 aa18.28■□□□□ 0.52
ARHGEF1-222ENST00000600517 IL13P35225 146 aa18.28■□□□□ 0.52
ARHGEF1-222ENST00000600517 R3HDM1Q15032 1099 aaKnown RBP18.28■□□□□ 0.52
ARHGEF1-222ENST00000600517 SPG7Q9UQ90 795 aa18.28■□□□□ 0.52
ARHGEF1-222ENST00000600517 TXNRD1Q16881 649 aa18.27■□□□□ 0.52
ARHGEF1-222ENST00000600517 NHSQ6T4R5 1651 aa18.27■□□□□ 0.52
ARHGEF1-222ENST00000600517 PLEKHG2Q9H7P9 1386 aa18.26■□□□□ 0.51
ARHGEF1-222ENST00000600517 CNGB1Q14028 1251 aaPredicted RBP18.25■□□□□ 0.51
ARHGEF1-222ENST00000600517 NKX1-1Q15270 411 aaPredicted RBP18.25■□□□□ 0.51
ARHGEF1-222ENST00000600517 SYTL4Q96C24 671 aaPredicted RBP18.25■□□□□ 0.51
ARHGEF1-222ENST00000600517 RREB1Q92766 1687 aa18.25■□□□□ 0.51
ARHGEF1-222ENST00000600517 RGPD3A6NKT7 1758 aaPredicted RBP18.25■□□□□ 0.51
ARHGEF1-222ENST00000600517 RGPD4Q7Z3J3 1758 aa18.25■□□□□ 0.51
ARHGEF1-222ENST00000600517 SHANK3Q9BYB0 1731 aa18.24■□□□□ 0.51
ARHGEF1-222ENST00000600517 SULT6B1Q6IMI4 303 aa18.22■□□□□ 0.51
ARHGEF1-222ENST00000600517 AEBP1Q8IUX7 1158 aa18.22■□□□□ 0.51
ARHGEF1-222ENST00000600517 IFNL2Q8IZJ0 200 aa18.22■□□□□ 0.51
ARHGEF1-222ENST00000600517 DIAPH1O60610 1272 aaKnown RBP18.21■□□□□ 0.51
ARHGEF1-222ENST00000600517 PHKG2P15735 406 aa18.21■□□□□ 0.51
ARHGEF1-222ENST00000600517 ZEB1P37275 1124 aaPredicted RBP18.21■□□□□ 0.51
ARHGEF1-222ENST00000600517 AMOTQ4VCS5 1084 aa18.21■□□□□ 0.51
ARHGEF1-222ENST00000600517 PLEKHO1Q53GL0 409 aaPredicted RBP18.21■□□□□ 0.51
ARHGEF1-222ENST00000600517 NUP188Q5SRE5 1749 aa18.2■□□□□ 0.5
ARHGEF1-222ENST00000600517 PKD1L3Q7Z443 1732 aa18.2■□□□□ 0.5
ARHGEF1-222ENST00000600517 KDRP35968 1356 aa18.2■□□□□ 0.5
ARHGEF1-222ENST00000600517 SRCAPQ6ZRS2 3230 aa18.2■□□□□ 0.5
ARHGEF1-222ENST00000600517 ANO8Q9HCE9 1232 aaPredicted RBP18.2■□□□□ 0.5
ARHGEF1-222ENST00000600517 SLC27A3Q5K4L6 730 aa18.19■□□□□ 0.5
ARHGEF1-222ENST00000600517 BTAF1O14981 1849 aa18.19■□□□□ 0.5
ARHGEF1-222ENST00000600517 MPRIPQ6WCQ1 1025 aa18.18■□□□□ 0.5
ARHGEF1-222ENST00000600517 LRRC4BQ9NT99 713 aa18.18■□□□□ 0.5
ARHGEF1-222ENST00000600517 PPP2R1AP30153 589 aa18.17■□□□□ 0.5
ARHGEF1-222ENST00000600517 SLC15A2Q16348 729 aa18.17■□□□□ 0.5
ARHGEF1-222ENST00000600517 STK32BQ9NY57 414 aa18.17■□□□□ 0.5
ARHGEF1-222ENST00000600517 DOT1LQ8TEK3 1739 aa18.16■□□□□ 0.5
ARHGEF1-222ENST00000600517 PIGBQ92521 554 aa18.16■□□□□ 0.5
ARHGEF1-222ENST00000600517 KAT6BQ8WYB5 2073 aa18.16■□□□□ 0.5
ARHGEF1-222ENST00000600517 ZNF530Q6P9A1 599 aaPredicted RBP18.15■□□□□ 0.5
ARHGEF1-222ENST00000600517 COL3A1P02461 1466 aaPredicted RBP18.14■□□□□ 0.5
ARHGEF1-222ENST00000600517 HSP90AB1P08238 724 aaKnown RBP18.14■□□□□ 0.49
ARHGEF1-222ENST00000600517 HMOX1P09601 288 aa18.14■□□□□ 0.49
ARHGEF1-222ENST00000600517 DCAF5Q96JK2 942 aa18.14■□□□□ 0.49
ARHGEF1-222ENST00000600517 CFAP53Q96M91 514 aa18.14■□□□□ 0.49
ARHGEF1-222ENST00000600517 ERVV-2B6SEH9 535 aa18.13■□□□□ 0.49
ARHGEF1-222ENST00000600517 SMARCC1Q92922 1105 aaPredicted RBP18.13■□□□□ 0.49
ARHGEF1-222ENST00000600517 U2SURPO15042 1029 aaKnown RBP18.12■□□□□ 0.49
ARHGEF1-222ENST00000600517 KCNQ4P56696 695 aa18.12■□□□□ 0.49
ARHGEF1-222ENST00000600517 DDX10Q13206 875 aaKnown RBP18.12■□□□□ 0.49
ARHGEF1-222ENST00000600517 AKT1S1Q96B36 256 aa18.12■□□□□ 0.49
ARHGEF1-222ENST00000600517 TMOD3Q9NYL9 352 aa18.12■□□□□ 0.49
ARHGEF1-222ENST00000600517 CCNL1Q9UK58 526 aaPredicted RBP18.12■□□□□ 0.49
ARHGEF1-222ENST00000600517 C1orf141Q5JVX7 400 aa18.11■□□□□ 0.49
ARHGEF1-222ENST00000600517 PALLDQ8WX93 1383 aa18.1■□□□□ 0.49
ARHGEF1-222ENST00000600517 ZNF827Q17R98 1081 aa18.1■□□□□ 0.49
ARHGEF1-222ENST00000600517 PDGFDQ9GZP0 370 aaPredicted RBP18.1■□□□□ 0.49
ARHGEF1-222ENST00000600517 TOGARAM1Q9Y4F4 1720 aa18.09■□□□□ 0.49
ARHGEF1-222ENST00000600517 HMGB2P26583 209 aaKnown RBP18.09■□□□□ 0.49
ARHGEF1-222ENST00000600517 AKAP4Q5JQC9 854 aa18.09■□□□□ 0.49
ARHGEF1-222ENST00000600517 NUDCQ9Y266 331 aa18.09■□□□□ 0.49
ARHGEF1-222ENST00000600517 PAPPAQ13219 1627 aa18.09■□□□□ 0.49
ARHGEF1-222ENST00000600517 MTHFSDQ2M296 383 aaKnown RBP18.08■□□□□ 0.48
ARHGEF1-222ENST00000600517 SPON1Q9HCB6 807 aa18.08■□□□□ 0.48
ARHGEF1-222ENST00000600517 ASAP1Q9ULH1 1129 aa18.08■□□□□ 0.48
ARHGEF1-222ENST00000600517 KDM6AO15550 1401 aaPredicted RBP18.07■□□□□ 0.48
ARHGEF1-222ENST00000600517 LY75O60449 1722 aa18.07■□□□□ 0.48
ARHGEF1-222ENST00000600517 CABP4P57796 275 aa18.07■□□□□ 0.48
ARHGEF1-222ENST00000600517 ATG3Q9NT62 314 aa18.07■□□□□ 0.48
ARHGEF1-222ENST00000600517 LRP5O75197 1615 aa18.07■□□□□ 0.48
ARHGEF1-222ENST00000600517 ITGB4P16144 1822 aa18.05■□□□□ 0.48
ARHGEF1-222ENST00000600517 RALBP1Q15311 655 aa18.05■□□□□ 0.48
ARHGEF1-222ENST00000600517 NFATC2IPQ8NCF5 419 aa18.05■□□□□ 0.48
ARHGEF1-222ENST00000600517 TFCP2L1Q9NZI6 479 aa18.05■□□□□ 0.48
ARHGEF1-222ENST00000600517 LOC102724428A0A0B4J2F2 783 aa18.04■□□□□ 0.48
ARHGEF1-222ENST00000600517 SIK1P57059 783 aa18.04■□□□□ 0.48
ARHGEF1-222ENST00000600517 LGR6Q9HBX8 967 aa18.04■□□□□ 0.48
ARHGEF1-222ENST00000600517 FCHSD2O94868 740 aa18.03■□□□□ 0.48
ARHGEF1-222ENST00000600517 ZBTB7AO95365 584 aa18.03■□□□□ 0.48
ARHGEF1-222ENST00000600517 U2AF1L5P0DN76 240 aaPredicted RBP18.03■□□□□ 0.48
ARHGEF1-222ENST00000600517 U2AF1Q01081 240 aaKnown RBP eCLIP18.03■□□□□ 0.48
ARHGEF1-222ENST00000600517 RSPH6AQ9H0K4 717 aa18.03■□□□□ 0.48
ARHGEF1-222ENST00000600517 PNPLA7Q6ZV29 1317 aa18.02■□□□□ 0.48
ARHGEF1-222ENST00000600517 RNMTO43148 476 aaKnown RBP18.02■□□□□ 0.48
ARHGEF1-222ENST00000600517 PRKAR2BP31323 418 aa18.02■□□□□ 0.48
ARHGEF1-222ENST00000600517 SLC16A10Q8TF71 515 aa18.02■□□□□ 0.48
ARHGEF1-222ENST00000600517 PHACTR3Q96KR7 559 aa18.02■□□□□ 0.48
ARHGEF1-222ENST00000600517 MTFR1LQ9H019 292 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms