RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 NSD2O96028 1365 aa21.45■■□□□ 1.02
IRF3-226ENST00000600453 MAP2P11137 1827 aaKnown RBP21.44■■□□□ 1.02
IRF3-226ENST00000600453 LRP5O75197 1615 aa21.44■■□□□ 1.02
IRF3-226ENST00000600453 RGPD2P0DJD1 1756 aa21.43■■□□□ 1.02
IRF3-226ENST00000600453 USHBP1Q8N6Y0 703 aa21.43■■□□□ 1.02
IRF3-226ENST00000600453 STK32BQ9NY57 414 aa21.43■■□□□ 1.02
IRF3-226ENST00000600453 NHSQ6T4R5 1651 aa21.43■■□□□ 1.02
IRF3-226ENST00000600453 TNNT2P45379 298 aaPredicted RBP21.41■■□□□ 1.02
IRF3-226ENST00000600453 MORC1Q86VD1 984 aa21.41■■□□□ 1.02
IRF3-226ENST00000600453 SYTL4Q96C24 671 aaPredicted RBP21.41■■□□□ 1.02
IRF3-226ENST00000600453 HMGB2P26583 209 aaKnown RBP21.4■■□□□ 1.02
IRF3-226ENST00000600453 PRIM1P49642 420 aaKnown RBP21.4■■□□□ 1.02
IRF3-226ENST00000600453 MEGF6O75095 1541 aa21.39■■□□□ 1.02
IRF3-226ENST00000600453 PCDH11XQ9BZA7 1347 aa21.39■■□□□ 1.01
IRF3-226ENST00000600453 PCDH11YQ9BZA8 1340 aa21.39■■□□□ 1.01
IRF3-226ENST00000600453 SPON1Q9HCB6 807 aa21.39■■□□□ 1.01
IRF3-226ENST00000600453 SLC15A2Q16348 729 aa21.38■■□□□ 1.01
IRF3-226ENST00000600453 SLC27A3Q5K4L6 730 aa21.38■■□□□ 1.01
IRF3-226ENST00000600453 SPG7Q9UQ90 795 aa21.38■■□□□ 1.01
IRF3-226ENST00000600453 KIF7Q2M1P5 1343 aa21.37■■□□□ 1.01
IRF3-226ENST00000600453 EYA1Q99502 592 aa21.37■■□□□ 1.01
IRF3-226ENST00000600453 ANKRD26Q9UPS8 1709 aa21.37■■□□□ 1.01
IRF3-226ENST00000600453 ANO8Q9HCE9 1232 aaPredicted RBP21.36■■□□□ 1.01
IRF3-226ENST00000600453 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.36■■□□□ 1.01
IRF3-226ENST00000600453 BTAF1O14981 1849 aa21.35■■□□□ 1.01
IRF3-226ENST00000600453 EIF4A2Q14240 407 aaKnown RBP21.33■■□□□ 1.01
IRF3-226ENST00000600453 PPP1R1BQ9UD71 204 aaPredicted RBP21.32■■□□□ 1
IRF3-226ENST00000600453 NCAPD2Q15021 1401 aa21.31■■□□□ 1
IRF3-226ENST00000600453 PLEKHG2Q9H7P9 1386 aa21.31■■□□□ 1
IRF3-226ENST00000600453 CYP27B1O15528 508 aa21.3■■□□□ 1
IRF3-226ENST00000600453 NKX1-1Q15270 411 aaPredicted RBP21.3■■□□□ 1
IRF3-226ENST00000600453 AMER1Q5JTC6 1135 aaPredicted RBP21.3■■□□□ 1
IRF3-226ENST00000600453 SHANK3Q9BYB0 1731 aa21.29■■□□□ 1
IRF3-226ENST00000600453 IFNL2Q8IZJ0 200 aa21.29■■□□□ 1
IRF3-226ENST00000600453 LRRC4BQ9NT99 713 aa21.29■■□□□ 1
IRF3-226ENST00000600453 PER1O15534 1290 aaPredicted RBP21.28■■□□□ 1
IRF3-226ENST00000600453 MPRIPQ6WCQ1 1025 aa21.27■■□□□ 1
IRF3-226ENST00000600453 SMARCC1Q92922 1105 aaPredicted RBP21.27■■□□□ 1
IRF3-226ENST00000600453 IGSF1Q8N6C5 1336 aa21.27■□□□□ 0.99
IRF3-226ENST00000600453 DOT1LQ8TEK3 1739 aa21.26■□□□□ 0.99
IRF3-226ENST00000600453 PLEKHO1Q53GL0 409 aaPredicted RBP21.26■□□□□ 0.99
IRF3-226ENST00000600453 CCNL1Q9UK58 526 aaPredicted RBP21.26■□□□□ 0.99
IRF3-226ENST00000600453 AMOTQ4VCS5 1084 aa21.25■□□□□ 0.99
IRF3-226ENST00000600453 AKT1S1Q96B36 256 aa21.25■□□□□ 0.99
IRF3-226ENST00000600453 MTFR1LQ9H019 292 aa21.25■□□□□ 0.99
IRF3-226ENST00000600453 ZBTB7AO95365 584 aa21.24■□□□□ 0.99
IRF3-226ENST00000600453 SLC16A10Q8TF71 515 aa21.24■□□□□ 0.99
IRF3-226ENST00000600453 TFCP2L1Q9NZI6 479 aa21.24■□□□□ 0.99
IRF3-226ENST00000600453 PKD1L3Q7Z443 1732 aa21.24■□□□□ 0.99
IRF3-226ENST00000600453 DCAF8L1A6NGE4 600 aa21.23■□□□□ 0.99
IRF3-226ENST00000600453 HSP90AB1P08238 724 aaKnown RBP21.23■□□□□ 0.99
IRF3-226ENST00000600453 PHKG2P15735 406 aa21.23■□□□□ 0.99
IRF3-226ENST00000600453 PDGFDQ9GZP0 370 aaPredicted RBP21.23■□□□□ 0.99
IRF3-226ENST00000600453 ATF5Q9Y2D1 282 aaPredicted RBP21.22■□□□□ 0.99
IRF3-226ENST00000600453 CASZ1Q86V15 1759 aa21.21■□□□□ 0.99
IRF3-226ENST00000600453 MTHFSP49914 203 aa21.21■□□□□ 0.99
IRF3-226ENST00000600453 ZNF827Q17R98 1081 aa21.21■□□□□ 0.99
IRF3-226ENST00000600453 CC2D1BQ5T0F9 858 aaKnown RBP21.21■□□□□ 0.99
IRF3-226ENST00000600453 TMOD3Q9NYL9 352 aa21.21■□□□□ 0.99
IRF3-226ENST00000600453 NPC1L1Q9UHC9 1359 aa21.21■□□□□ 0.99
IRF3-226ENST00000600453 LY75O60449 1722 aa21.2■□□□□ 0.98
IRF3-226ENST00000600453 PAPPAQ13219 1627 aa21.19■□□□□ 0.98
IRF3-226ENST00000600453 IL13P35225 146 aa21.19■□□□□ 0.98
IRF3-226ENST00000600453 KCNQ4P56696 695 aa21.19■□□□□ 0.98
IRF3-226ENST00000600453 PIGBQ92521 554 aa21.19■□□□□ 0.98
IRF3-226ENST00000600453 ERVV-2B6SEH9 535 aa21.18■□□□□ 0.98
IRF3-226ENST00000600453 PTGER2P43116 358 aa21.18■□□□□ 0.98
IRF3-226ENST00000600453 SULT6B1Q6IMI4 303 aa21.18■□□□□ 0.98
IRF3-226ENST00000600453 DCAF5Q96JK2 942 aa21.18■□□□□ 0.98
IRF3-226ENST00000600453 PALLDQ8WX93 1383 aa21.18■□□□□ 0.98
IRF3-226ENST00000600453 FLAD1Q8NFF5 587 aa21.17■□□□□ 0.98
IRF3-226ENST00000600453 ITGB4P16144 1822 aa21.16■□□□□ 0.98
IRF3-226ENST00000600453 C1orf141Q5JVX7 400 aa21.16■□□□□ 0.98
IRF3-226ENST00000600453 PNPLA7Q6ZV29 1317 aa21.15■□□□□ 0.98
IRF3-226ENST00000600453 DIAPH1O60610 1272 aaKnown RBP21.15■□□□□ 0.98
IRF3-226ENST00000600453 POLD1P28340 1107 aa21.15■□□□□ 0.98
IRF3-226ENST00000600453 ZNF530Q6P9A1 599 aaPredicted RBP21.15■□□□□ 0.98
IRF3-226ENST00000600453 KDRP35968 1356 aa21.13■□□□□ 0.97
IRF3-226ENST00000600453 QSER1Q2KHR3 1735 aa21.13■□□□□ 0.97
IRF3-226ENST00000600453 AEBP1Q8IUX7 1158 aa21.13■□□□□ 0.97
IRF3-226ENST00000600453 ARXQ96QS3 562 aa21.13■□□□□ 0.97
IRF3-226ENST00000600453 SGIP1Q9BQI5 828 aa21.13■□□□□ 0.97
IRF3-226ENST00000600453 LOC102724428A0A0B4J2F2 783 aa21.12■□□□□ 0.97
IRF3-226ENST00000600453 MSH5O43196 834 aa21.12■□□□□ 0.97
IRF3-226ENST00000600453 SIK1P57059 783 aa21.12■□□□□ 0.97
IRF3-226ENST00000600453 CABP4P57796 275 aa21.11■□□□□ 0.97
IRF3-226ENST00000600453 AK7Q96M32 723 aa21.1■□□□□ 0.97
IRF3-226ENST00000600453 ASAP1Q9ULH1 1129 aa21.1■□□□□ 0.97
IRF3-226ENST00000600453 TOGARAM1Q9Y4F4 1720 aa21.09■□□□□ 0.97
IRF3-226ENST00000600453 ATP6V1AP38606 617 aa21.09■□□□□ 0.97
IRF3-226ENST00000600453 CNGB1Q14028 1251 aaPredicted RBP21.09■□□□□ 0.97
IRF3-226ENST00000600453 SYT17Q9BSW7 474 aa21.09■□□□□ 0.97
IRF3-226ENST00000600453 ATG3Q9NT62 314 aa21.09■□□□□ 0.97
IRF3-226ENST00000600453 AKAP4Q5JQC9 854 aa21.08■□□□□ 0.97
IRF3-226ENST00000600453 COL23A1Q86Y22 540 aaPredicted RBP21.08■□□□□ 0.97
IRF3-226ENST00000600453 CFAP53Q96M91 514 aa21.08■□□□□ 0.97
IRF3-226ENST00000600453 FHDC1Q9C0D6 1143 aaPredicted RBP21.08■□□□□ 0.97
IRF3-226ENST00000600453 C5P01031 1676 aa21.06■□□□□ 0.96
IRF3-226ENST00000600453 HMOX1P09601 288 aa21.06■□□□□ 0.96
IRF3-226ENST00000600453 TAF1LQ8IZX4 1826 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms