RNA–Protein interactions for RNA: ENST00000600277.5

SLC27A1-208, Transcript of solute carrier family 27 member 1, humanhuman

TSL 2

Gene SLC27A1, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1-208ENST00000600277 RSPH6AQ9H0K4 717 aa29.4■■■□□ 2.3
SLC27A1-208ENST00000600277 TATP17735 454 aaPredicted RBP29.39■■■□□ 2.3
SLC27A1-208ENST00000600277 DDB1Q16531 1140 aa29.39■■■□□ 2.3
SLC27A1-208ENST00000600277 EXOC5O00471 708 aa29.38■■■□□ 2.29
SLC27A1-208ENST00000600277 PDE3BQ13370 1112 aa29.38■■■□□ 2.29
SLC27A1-208ENST00000600277 DISP2A7MBM2 1401 aa29.38■■■□□ 2.29
SLC27A1-208ENST00000600277 THSD7AQ9UPZ6 1657 aa29.37■■■□□ 2.29
SLC27A1-208ENST00000600277 PLEKHG2Q9H7P9 1386 aa29.37■■■□□ 2.29
SLC27A1-208ENST00000600277 KRT27Q7Z3Y8 459 aa29.36■■■□□ 2.29
SLC27A1-208ENST00000600277 PLEKHF1Q96S99 279 aa29.35■■■□□ 2.29
SLC27A1-208ENST00000600277 WNK3Q9BYP7 1800 aa29.34■■■□□ 2.29
SLC27A1-208ENST00000600277 MEGF6O75095 1541 aa29.34■■■□□ 2.29
SLC27A1-208ENST00000600277 PARP4Q9UKK3 1724 aaKnown RBP29.32■■■□□ 2.28
SLC27A1-208ENST00000600277 PRKAR2BP31323 418 aa29.32■■■□□ 2.28
SLC27A1-208ENST00000600277 EP400Q96L91 3159 aa29.32■■■□□ 2.28
SLC27A1-208ENST00000600277 FAM9BQ8IZU0 186 aa29.31■■■□□ 2.28
SLC27A1-208ENST00000600277 ZCRB1Q8TBF4 217 aaKnown RBP29.31■■■□□ 2.28
SLC27A1-208ENST00000600277 PNNQ9H307 717 aaKnown RBP29.31■■■□□ 2.28
SLC27A1-208ENST00000600277 OVOS2A0A0G2JMS6 1433 aa29.31■■■□□ 2.28
SLC27A1-208ENST00000600277 CCDC125Q86Z20 511 aa29.29■■■□□ 2.28
SLC27A1-208ENST00000600277 BRWD3Q6RI45 1802 aa29.29■■■□□ 2.28
SLC27A1-208ENST00000600277 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.28■■■□□ 2.28
SLC27A1-208ENST00000600277 SPG7Q9UQ90 795 aa29.28■■■□□ 2.28
SLC27A1-208ENST00000600277 PHACTR3Q96KR7 559 aa29.28■■■□□ 2.28
SLC27A1-208ENST00000600277 LRRC37A3O60309 1634 aa29.27■■■□□ 2.28
SLC27A1-208ENST00000600277 TNS2Q63HR2 1409 aa29.27■■■□□ 2.28
SLC27A1-208ENST00000600277 DDX54Q8TDD1 881 aaKnown RBP29.27■■■□□ 2.28
SLC27A1-208ENST00000600277 RUNDC1Q96C34 613 aa29.27■■■□□ 2.28
SLC27A1-208ENST00000600277 PLEKHO1Q53GL0 409 aaPredicted RBP29.26■■■□□ 2.27
SLC27A1-208ENST00000600277 AMOTQ4VCS5 1084 aa29.25■■■□□ 2.27
SLC27A1-208ENST00000600277 FAM182BQ5T319 152 aa29.23■■■□□ 2.27
SLC27A1-208ENST00000600277 CCDC146Q8IYE0 955 aa29.23■■■□□ 2.27
SLC27A1-208ENST00000600277 MARCH10Q8NA82 808 aaPredicted RBP29.22■■■□□ 2.27
SLC27A1-208ENST00000600277 PCDH11XQ9BZA7 1347 aa29.22■■■□□ 2.27
SLC27A1-208ENST00000600277 PCDH11YQ9BZA8 1340 aa29.22■■■□□ 2.27
SLC27A1-208ENST00000600277 NEFMP07197 916 aa29.2■■■□□ 2.27
SLC27A1-208ENST00000600277 MTHFSDQ2M296 383 aaKnown RBP29.2■■■□□ 2.27
SLC27A1-208ENST00000600277 FAM196AQ6ZSG2 479 aa29.2■■■□□ 2.27
SLC27A1-208ENST00000600277 MAPK8IP3Q9UPT6 1336 aa29.19■■■□□ 2.26
SLC27A1-208ENST00000600277 GAS2L2Q8NHY3 880 aa29.18■■■□□ 2.26
SLC27A1-208ENST00000600277 CYP27B1O15528 508 aa29.16■■■□□ 2.26
SLC27A1-208ENST00000600277 ZNF530Q6P9A1 599 aaPredicted RBP29.16■■■□□ 2.26
SLC27A1-208ENST00000600277 IFNL2Q8IZJ0 200 aa29.16■■■□□ 2.26
SLC27A1-208ENST00000600277 PKD1L3Q7Z443 1732 aa29.15■■■□□ 2.26
SLC27A1-208ENST00000600277 NFE2L2Q16236 605 aa29.15■■■□□ 2.26
SLC27A1-208ENST00000600277 C1orf141Q5JVX7 400 aa29.15■■■□□ 2.26
SLC27A1-208ENST00000600277 APAF1O14727 1248 aa29.14■■■□□ 2.26
SLC27A1-208ENST00000600277 TMPOP42166 694 aaKnown RBP29.14■■■□□ 2.26
SLC27A1-208ENST00000600277 DEFB132Q7Z7B7 95 aa29.14■■■□□ 2.26
SLC27A1-208ENST00000600277 PHKG2P15735 406 aa29.13■■■□□ 2.25
SLC27A1-208ENST00000600277 SF3B2Q13435 895 aaKnown RBP29.11■■■□□ 2.25
SLC27A1-208ENST00000600277 NCBP3Q53F19 620 aaKnown RBP29.11■■■□□ 2.25
SLC27A1-208ENST00000600277 AKAP4Q5JQC9 854 aa29.11■■■□□ 2.25
SLC27A1-208ENST00000600277 NKX1-1Q15270 411 aaPredicted RBP29.11■■■□□ 2.25
SLC27A1-208ENST00000600277 SHANK3Q9BYB0 1731 aa29.11■■■□□ 2.25
SLC27A1-208ENST00000600277 HSP90AB1P08238 724 aaKnown RBP29.1■■■□□ 2.25
SLC27A1-208ENST00000600277 BCL9O00512 1426 aa29.08■■■□□ 2.25
SLC27A1-208ENST00000600277 MAP3K5Q99683 1374 aa29.07■■■□□ 2.24
SLC27A1-208ENST00000600277 GNAT3A8MTJ3 354 aa29.07■■■□□ 2.24
SLC27A1-208ENST00000600277 HTATSF1O43719 755 aaKnown RBP29.07■■■□□ 2.24
SLC27A1-208ENST00000600277 RIPK4P57078 832 aa29.07■■■□□ 2.24
SLC27A1-208ENST00000600277 RRP7AQ9Y3A4 280 aaKnown RBP29.07■■■□□ 2.24
SLC27A1-208ENST00000600277 TRIM37O94972 964 aa29.06■■■□□ 2.24
SLC27A1-208ENST00000600277 ACSBG1Q96GR2 724 aa29.06■■■□□ 2.24
SLC27A1-208ENST00000600277 NGEFQ8N5V2 710 aa29.04■■■□□ 2.24
SLC27A1-208ENST00000600277 DCAF5Q96JK2 942 aa29.04■■■□□ 2.24
SLC27A1-208ENST00000600277 TRIM35Q9UPQ4 493 aa29.04■■■□□ 2.24
SLC27A1-208ENST00000600277 CCDC27Q2M243 656 aa29.03■■■□□ 2.24
SLC27A1-208ENST00000600277 SYTL4Q96C24 671 aaPredicted RBP29.03■■■□□ 2.24
SLC27A1-208ENST00000600277 KAT6BQ8WYB5 2073 aa29.03■■■□□ 2.24
SLC27A1-208ENST00000600277 NEUROD2Q15784 382 aa29.03■■■□□ 2.24
SLC27A1-208ENST00000600277 KDM6AO15550 1401 aaPredicted RBP29.02■■■□□ 2.24
SLC27A1-208ENST00000600277 PRIM1P49642 420 aaKnown RBP29.01■■■□□ 2.23
SLC27A1-208ENST00000600277 LMOD3Q0VAK6 560 aa29.01■■■□□ 2.23
SLC27A1-208ENST00000600277 MPRIPQ6WCQ1 1025 aa29.01■■■□□ 2.23
SLC27A1-208ENST00000600277 IL17REQ8NFR9 667 aa29.01■■■□□ 2.23
SLC27A1-208ENST00000600277 BCL11BQ9C0K0 894 aaPredicted RBP29.01■■■□□ 2.23
SLC27A1-208ENST00000600277 CEMIPQ8WUJ3 1361 aa29.01■■■□□ 2.23
SLC27A1-208ENST00000600277 RNMTO43148 476 aaKnown RBP29■■■□□ 2.23
SLC27A1-208ENST00000600277 LGR6Q9HBX8 967 aa29■■■□□ 2.23
SLC27A1-208ENST00000600277 SENP3-EIF4A1A0A087X0R7 540 aa28.99■■■□□ 2.23
SLC27A1-208ENST00000600277 KCNQ2O43526 872 aa28.99■■■□□ 2.23
SLC27A1-208ENST00000600277 BAG6P46379 1132 aa28.99■■■□□ 2.23
SLC27A1-208ENST00000600277 RTF1Q92541 710 aaKnown RBP28.99■■■□□ 2.23
SLC27A1-208ENST00000600277 DCTN1Q14203 1278 aa28.97■■■□□ 2.23
SLC27A1-208ENST00000600277 MCM10Q7L590 875 aa28.97■■■□□ 2.23
SLC27A1-208ENST00000600277 SBF2Q86WG5 1849 aa28.97■■■□□ 2.23
SLC27A1-208ENST00000600277 ADAMTS7Q9UKP4 1686 aa28.97■■■□□ 2.23
SLC27A1-208ENST00000600277 ERVV-2B6SEH9 535 aa28.96■■■□□ 2.23
SLC27A1-208ENST00000600277 WWC1Q8IX03 1113 aa28.96■■■□□ 2.23
SLC27A1-208ENST00000600277 APBA3O96018 575 aa28.95■■■□□ 2.23
SLC27A1-208ENST00000600277 EN1Q05925 392 aaPredicted RBP28.95■■■□□ 2.23
SLC27A1-208ENST00000600277 DOT1LQ8TEK3 1739 aa28.95■■■□□ 2.23
SLC27A1-208ENST00000600277 ZNF521Q96K83 1311 aa28.95■■■□□ 2.22
SLC27A1-208ENST00000600277 TMOD3Q9NYL9 352 aa28.94■■■□□ 2.22
SLC27A1-208ENST00000600277 CABP4P57796 275 aa28.94■■■□□ 2.22
SLC27A1-208ENST00000600277 HNRNPUQ00839 825 aaKnown RBP eCLIP28.94■■■□□ 2.22
SLC27A1-208ENST00000600277 PTF1AQ7RTS3 328 aa28.94■■■□□ 2.22
SLC27A1-208ENST00000600277 THUMPD2Q9BTF0 503 aaKnown RBP28.93■■■□□ 2.22
SLC27A1-208ENST00000600277 SALL2Q9Y467 1007 aaPredicted RBP28.93■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms