RNA–Protein interactions for RNA: ENST00000600231.5

GRAMD1A-212, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 2,534 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-212ENST00000600231 C1orf115Q9H7X2 142 aa27.33■■□□□ 1.97
GRAMD1A-212ENST00000600231 KIAA0232Q92628 1395 aa27.33■■□□□ 1.96
GRAMD1A-212ENST00000600231 ADGRL3Q9HAR2 1447 aa27.32■■□□□ 1.96
GRAMD1A-212ENST00000600231 USP54Q70EL1 1684 aa27.32■■□□□ 1.96
GRAMD1A-212ENST00000600231 NPHP4O75161 1426 aaPredicted RBP27.32■■□□□ 1.96
GRAMD1A-212ENST00000600231 GAS2L2Q8NHY3 880 aa27.31■■□□□ 1.96
GRAMD1A-212ENST00000600231 LTV1Q96GA3 475 aaPredicted RBP27.31■■□□□ 1.96
GRAMD1A-212ENST00000600231 HAP1P54257 671 aaPredicted RBP27.31■■□□□ 1.96
GRAMD1A-212ENST00000600231 PSME1Q06323 249 aa27.29■■□□□ 1.96
GRAMD1A-212ENST00000600231 NUCB1Q02818 461 aa27.28■■□□□ 1.96
GRAMD1A-212ENST00000600231 TSPYL4Q9UJ04 414 aa27.27■■□□□ 1.96
GRAMD1A-212ENST00000600231 NWD1Q149M9 1564 aa27.26■■□□□ 1.96
GRAMD1A-212ENST00000600231 DAXXQ9UER7 740 aaPredicted RBP27.26■■□□□ 1.95
GRAMD1A-212ENST00000600231 SIRT2Q8IXJ6 389 aa27.25■■□□□ 1.95
GRAMD1A-212ENST00000600231 LNPKQ9C0E8 428 aa27.25■■□□□ 1.95
GRAMD1A-212ENST00000600231 CHD1LQ86WJ1 897 aa27.23■■□□□ 1.95
GRAMD1A-212ENST00000600231 ORAI2Q96SN7 254 aa27.23■■□□□ 1.95
GRAMD1A-212ENST00000600231 GNAT3A8MTJ3 354 aa27.23■■□□□ 1.95
GRAMD1A-212ENST00000600231 HTATSF1O43719 755 aaKnown RBP27.23■■□□□ 1.95
GRAMD1A-212ENST00000600231 INTS3Q68E01 1043 aaKnown RBP27.23■■□□□ 1.95
GRAMD1A-212ENST00000600231 RGS12O14924 1447 aa27.23■■□□□ 1.95
GRAMD1A-212ENST00000600231 RTL1A6NKG5 1358 aa27.22■■□□□ 1.95
GRAMD1A-212ENST00000600231 USHBP1Q8N6Y0 703 aa27.22■■□□□ 1.95
GRAMD1A-212ENST00000600231 IP6K1Q92551 441 aa27.22■■□□□ 1.95
GRAMD1A-212ENST00000600231 SLC4A2P04920 1241 aa27.21■■□□□ 1.95
GRAMD1A-212ENST00000600231 LTN1O94822 1766 aa27.21■■□□□ 1.95
GRAMD1A-212ENST00000600231 GCC1Q96CN9 775 aa27.21■■□□□ 1.95
GRAMD1A-212ENST00000600231 UPF2Q9HAU5 1272 aaKnown RBP27.2■■□□□ 1.94
GRAMD1A-212ENST00000600231 ANKRD45Q5TZF3 282 aa27.19■■□□□ 1.94
GRAMD1A-212ENST00000600231 PTPRCP08575 1304 aa27.19■■□□□ 1.94
GRAMD1A-212ENST00000600231 NFAT5O94916 1531 aa27.19■■□□□ 1.94
GRAMD1A-212ENST00000600231 XPCQ01831 940 aaPredicted RBP27.19■■□□□ 1.94
GRAMD1A-212ENST00000600231 IL17REQ8NFR9 667 aa27.18■■□□□ 1.94
GRAMD1A-212ENST00000600231 ZBTB7CA1YPR0 619 aa27.17■■□□□ 1.94
GRAMD1A-212ENST00000600231 KCNH5Q8NCM2 988 aa27.17■■□□□ 1.94
GRAMD1A-212ENST00000600231 TBC1D32Q96NH3 1257 aa27.17■■□□□ 1.94
GRAMD1A-212ENST00000600231 MAP3K5Q99683 1374 aa27.16■■□□□ 1.94
GRAMD1A-212ENST00000600231 NBPF6Q5VWK0 638 aa27.16■■□□□ 1.94
GRAMD1A-212ENST00000600231 NBPF4Q96M43 638 aa27.16■■□□□ 1.94
GRAMD1A-212ENST00000600231 PROSER2Q86WR7 435 aaPredicted RBP27.15■■□□□ 1.94
GRAMD1A-212ENST00000600231 MSH6P52701 1360 aa27.14■■□□□ 1.94
GRAMD1A-212ENST00000600231 G2E3Q7L622 706 aa27.14■■□□□ 1.94
GRAMD1A-212ENST00000600231 RTL5Q5HYW3 569 aaPredicted RBP27.14■■□□□ 1.93
GRAMD1A-212ENST00000600231 LRRC37A3O60309 1634 aa27.13■■□□□ 1.93
GRAMD1A-212ENST00000600231 PLEKHG5O94827 1062 aa27.13■■□□□ 1.93
GRAMD1A-212ENST00000600231 GCP02774 474 aa27.11■■□□□ 1.93
GRAMD1A-212ENST00000600231 TAF7Q15545 349 aaPredicted RBP27.1■■□□□ 1.93
GRAMD1A-212ENST00000600231 LMOD2Q6P5Q4 547 aa27.1■■□□□ 1.93
GRAMD1A-212ENST00000600231 MFAP1P55081 439 aaKnown RBP27.09■■□□□ 1.93
GRAMD1A-212ENST00000600231 MEIS3Q99687 375 aa27.09■■□□□ 1.93
GRAMD1A-212ENST00000600231 F6X3S4 739 aa27.09■■□□□ 1.93
GRAMD1A-212ENST00000600231 LRRC59Q96AG4 307 aaKnown RBP27.08■■□□□ 1.93
GRAMD1A-212ENST00000600231 ATP10DQ9P241 1426 aa27.08■■□□□ 1.93
GRAMD1A-212ENST00000600231 ANKRD44Q8N8A2 993 aa27.08■■□□□ 1.92
GRAMD1A-212ENST00000600231 STK31Q9BXU1 1019 aa27.08■■□□□ 1.92
GRAMD1A-212ENST00000600231 DCTPP1Q9H773 170 aa27.08■■□□□ 1.92
GRAMD1A-212ENST00000600231 ARHGEF25Q86VW2 580 aa27.07■■□□□ 1.92
GRAMD1A-212ENST00000600231 BMP2KLQ5H9B9 411 aa27.07■■□□□ 1.92
GRAMD1A-212ENST00000600231 SLC4A10Q6U841 1118 aa27.07■■□□□ 1.92
GRAMD1A-212ENST00000600231 NECTIN2Q92692 538 aa27.06■■□□□ 1.92
GRAMD1A-212ENST00000600231 C19orf44Q9H6X5 657 aa27.06■■□□□ 1.92
GRAMD1A-212ENST00000600231 CEP85Q6P2H3 762 aa27.06■■□□□ 1.92
GRAMD1A-212ENST00000600231 RPAP2Q8IXW5 612 aaPredicted RBP27.06■■□□□ 1.92
GRAMD1A-212ENST00000600231 CCDC30Q5VVM6 783 aa27.05■■□□□ 1.92
GRAMD1A-212ENST00000600231 KRT28Q7Z3Y7 464 aa27.05■■□□□ 1.92
GRAMD1A-212ENST00000600231 BABAM1Q9NWV8 329 aa27.05■■□□□ 1.92
GRAMD1A-212ENST00000600231 BECN1Q14457 450 aa27.05■■□□□ 1.92
GRAMD1A-212ENST00000600231 C22orf23Q9BZE7 217 aa27.05■■□□□ 1.92
GRAMD1A-212ENST00000600231 RGPD2P0DJD1 1756 aa27.04■■□□□ 1.92
GRAMD1A-212ENST00000600231 PHRF1Q9P1Y6 1649 aaKnown RBP27.04■■□□□ 1.92
GRAMD1A-212ENST00000600231 C1orf167Q5SNV9 1468 aa27.03■■□□□ 1.92
GRAMD1A-212ENST00000600231 USP35Q9P2H5 1018 aa27.03■■□□□ 1.92
GRAMD1A-212ENST00000600231 CEMIPQ8WUJ3 1361 aa27.03■■□□□ 1.92
GRAMD1A-212ENST00000600231 LGR6Q9HBX8 967 aa27.03■■□□□ 1.92
GRAMD1A-212ENST00000600231 FLIIQ13045 1269 aa27.02■■□□□ 1.92
GRAMD1A-212ENST00000600231 CCT4P50991 539 aaKnown RBP27.01■■□□□ 1.92
GRAMD1A-212ENST00000600231 SLIT3O75094 1523 aa27.01■■□□□ 1.92
GRAMD1A-212ENST00000600231 DNAJC5Q9H3Z4 198 aa27■■□□□ 1.91
GRAMD1A-212ENST00000600231 FKBP5Q13451 457 aaPredicted RBP26.99■■□□□ 1.91
GRAMD1A-212ENST00000600231 SOS1Q07889 1333 aaPredicted RBP26.99■■□□□ 1.91
GRAMD1A-212ENST00000600231 DEKP35659 375 aaKnown RBP26.98■■□□□ 1.91
GRAMD1A-212ENST00000600231 NFKBIBQ15653 356 aa26.98■■□□□ 1.91
GRAMD1A-212ENST00000600231 BCL11AQ9H165 835 aa26.98■■□□□ 1.91
GRAMD1A-212ENST00000600231 AXIN2Q9Y2T1 843 aa26.98■■□□□ 1.91
GRAMD1A-212ENST00000600231 TRPM3Q9HCF6 1732 aaPredicted RBP26.98■■□□□ 1.91
GRAMD1A-212ENST00000600231 ANKRD24Q8TF21 1146 aa26.97■■□□□ 1.91
GRAMD1A-212ENST00000600231 TBC1D2Q9BYX2 928 aa26.97■■□□□ 1.91
GRAMD1A-212ENST00000600231 FAM208AQ9UK61 1670 aaKnown RBP26.97■■□□□ 1.91
GRAMD1A-212ENST00000600231 ZNF530Q6P9A1 599 aaPredicted RBP26.97■■□□□ 1.91
GRAMD1A-212ENST00000600231 PLEKHM2Q8IWE5 1019 aa26.96■■□□□ 1.91
GRAMD1A-212ENST00000600231 PLEKHO1Q53GL0 409 aaPredicted RBP26.96■■□□□ 1.91
GRAMD1A-212ENST00000600231 CACNA1FO60840 1977 aa26.96■■□□□ 1.91
GRAMD1A-212ENST00000600231 C16orf71Q8IYS4 520 aaPredicted RBP26.95■■□□□ 1.91
GRAMD1A-212ENST00000600231 AKAP4Q5JQC9 854 aa26.95■■□□□ 1.9
GRAMD1A-212ENST00000600231 HDGFL1Q5TGJ6 251 aa26.95■■□□□ 1.9
GRAMD1A-212ENST00000600231 TMEM94Q12767 1356 aa26.94■■□□□ 1.9
GRAMD1A-212ENST00000600231 ATF3P18847 181 aa26.94■■□□□ 1.9
GRAMD1A-212ENST00000600231 MPRIPQ6WCQ1 1025 aa26.94■■□□□ 1.9
GRAMD1A-212ENST00000600231 KIF1AQ12756 1690 aa26.93■■□□□ 1.9
GRAMD1A-212ENST00000600231 EIF4A1P60842 406 aaKnown RBP26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms