RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 FYB1O15117 783 aa24.07■■□□□ 1.44
SMG9-210ENST00000600097 ZNF784Q8NCA9 323 aaPredicted RBP24.07■■□□□ 1.44
SMG9-210ENST00000600097 PNPLA7Q6ZV29 1317 aa24.07■■□□□ 1.44
SMG9-210ENST00000600097 MEGF6O75095 1541 aa24.06■■□□□ 1.44
SMG9-210ENST00000600097 RRS1Q15050 365 aaKnown RBP24.06■■□□□ 1.44
SMG9-210ENST00000600097 SMG6Q86US8 1419 aaKnown RBP24.05■■□□□ 1.44
SMG9-210ENST00000600097 NBPF6Q5VWK0 638 aa24.05■■□□□ 1.44
SMG9-210ENST00000600097 NBPF4Q96M43 638 aa24.05■■□□□ 1.44
SMG9-210ENST00000600097 GGNBP2Q9H3C7 697 aa24.05■■□□□ 1.44
SMG9-210ENST00000600097 NSD2O96028 1365 aa24.04■■□□□ 1.44
SMG9-210ENST00000600097 CDCA8Q53HL2 280 aa24.04■■□□□ 1.44
SMG9-210ENST00000600097 RAPGEF4Q8WZA2 1011 aa24.04■■□□□ 1.44
SMG9-210ENST00000600097 QSER1Q2KHR3 1735 aa24.04■■□□□ 1.44
SMG9-210ENST00000600097 KCNQ4P56696 695 aa24.03■■□□□ 1.44
SMG9-210ENST00000600097 CCNL1Q9UK58 526 aaPredicted RBP24.03■■□□□ 1.44
SMG9-210ENST00000600097 USP47Q96K76 1375 aa24.03■■□□□ 1.44
SMG9-210ENST00000600097 DOT1LQ8TEK3 1739 aa24.01■■□□□ 1.43
SMG9-210ENST00000600097 GPR162Q16538 588 aa24.01■■□□□ 1.43
SMG9-210ENST00000600097 TATP17735 454 aaPredicted RBP24■■□□□ 1.43
SMG9-210ENST00000600097 HMGB2P26583 209 aaKnown RBP24■■□□□ 1.43
SMG9-210ENST00000600097 KLHL34Q8N239 644 aa24■■□□□ 1.43
SMG9-210ENST00000600097 INSRP06213 1382 aa24■■□□□ 1.43
SMG9-210ENST00000600097 KIF24Q5T7B8 1368 aa24■■□□□ 1.43
SMG9-210ENST00000600097 LY75O60449 1722 aa23.99■■□□□ 1.43
SMG9-210ENST00000600097 RGPD2P0DJD1 1756 aa23.99■■□□□ 1.43
SMG9-210ENST00000600097 USHBP1Q8N6Y0 703 aa23.99■■□□□ 1.43
SMG9-210ENST00000600097 UTRNP46939 3433 aa23.99■■□□□ 1.43
SMG9-210ENST00000600097 SHANK3Q9BYB0 1731 aa23.98■■□□□ 1.43
SMG9-210ENST00000600097 FLT4P35916 1363 aa23.98■■□□□ 1.43
SMG9-210ENST00000600097 CHD4Q14839 1912 aa23.97■■□□□ 1.43
SMG9-210ENST00000600097 HSP90AB2PQ58FF8 381 aa23.97■■□□□ 1.43
SMG9-210ENST00000600097 PCDH11XQ9BZA7 1347 aa23.97■■□□□ 1.43
SMG9-210ENST00000600097 PCDH11YQ9BZA8 1340 aa23.97■■□□□ 1.43
SMG9-210ENST00000600097 COL24A1Q17RW2 1714 aa23.96■■□□□ 1.43
SMG9-210ENST00000600097 MSH5O43196 834 aa23.94■■□□□ 1.42
SMG9-210ENST00000600097 TUBGCP6Q96RT7 1819 aa23.92■■□□□ 1.42
SMG9-210ENST00000600097 COL23A1Q86Y22 540 aaPredicted RBP23.92■■□□□ 1.42
SMG9-210ENST00000600097 PELP1Q8IZL8 1130 aaKnown RBP23.92■■□□□ 1.42
SMG9-210ENST00000600097 FLAD1Q8NFF5 587 aa23.91■■□□□ 1.42
SMG9-210ENST00000600097 NLGN2Q8NFZ4 835 aa23.9■■□□□ 1.42
SMG9-210ENST00000600097 CYP27B1O15528 508 aa23.89■■□□□ 1.41
SMG9-210ENST00000600097 TRIM26Q12899 539 aaPredicted RBP23.89■■□□□ 1.41
SMG9-210ENST00000600097 MPRIPQ6WCQ1 1025 aa23.89■■□□□ 1.41
SMG9-210ENST00000600097 CARD14Q9BXL6 1004 aa23.89■■□□□ 1.41
SMG9-210ENST00000600097 PALLDQ8WX93 1383 aa23.89■■□□□ 1.41
SMG9-210ENST00000600097 SMARCC1Q92922 1105 aaPredicted RBP23.88■■□□□ 1.41
SMG9-210ENST00000600097 KIF20BQ96Q89 1820 aa23.88■■□□□ 1.41
SMG9-210ENST00000600097 NSD3Q9BZ95 1437 aa23.87■■□□□ 1.41
SMG9-210ENST00000600097 GRIN3BO60391 1043 aa23.87■■□□□ 1.41
SMG9-210ENST00000600097 EMILIN1Q9Y6C2 1016 aa23.87■■□□□ 1.41
SMG9-210ENST00000600097 C1QTNF8P60827 252 aa23.86■■□□□ 1.41
SMG9-210ENST00000600097 TIMELESSQ9UNS1 1208 aa23.85■■□□□ 1.41
SMG9-210ENST00000600097 MSL1Q68DK7 614 aa23.84■■□□□ 1.41
SMG9-210ENST00000600097 SPG7Q9UQ90 795 aa23.84■■□□□ 1.41
SMG9-210ENST00000600097 NCAPD2Q15021 1401 aa23.84■■□□□ 1.41
SMG9-210ENST00000600097 C5P01031 1676 aa23.83■■□□□ 1.41
SMG9-210ENST00000600097 PPM1GO15355 546 aaPredicted RBP23.83■■□□□ 1.41
SMG9-210ENST00000600097 NKX1-1Q15270 411 aaPredicted RBP23.83■■□□□ 1.41
SMG9-210ENST00000600097 WASHC2AQ641Q2 1341 aa23.83■■□□□ 1.4
SMG9-210ENST00000600097 CD2APQ9Y5K6 639 aa23.82■■□□□ 1.4
SMG9-210ENST00000600097 SENP3-EIF4A1A0A087X0R7 540 aa23.81■■□□□ 1.4
SMG9-210ENST00000600097 YBX3P16989 372 aaKnown RBP eCLIP23.81■■□□□ 1.4
SMG9-210ENST00000600097 AK7Q96M32 723 aa23.81■■□□□ 1.4
SMG9-210ENST00000600097 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.81■■□□□ 1.4
SMG9-210ENST00000600097 PIGBQ92521 554 aa23.8■■□□□ 1.4
SMG9-210ENST00000600097 PKD1L3Q7Z443 1732 aa23.79■■□□□ 1.4
SMG9-210ENST00000600097 GOLGB1Q14789 3259 aaKnown RBP23.79■■□□□ 1.4
SMG9-210ENST00000600097 GIGYF1O75420 1035 aaPredicted RBP23.79■■□□□ 1.4
SMG9-210ENST00000600097 EYA1Q99502 592 aa23.78■■□□□ 1.4
SMG9-210ENST00000600097 TAF1LQ8IZX4 1826 aa23.77■■□□□ 1.4
SMG9-210ENST00000600097 TOGARAM1Q9Y4F4 1720 aa23.76■■□□□ 1.39
SMG9-210ENST00000600097 C4BP0C0L5 1744 aa23.76■■□□□ 1.39
SMG9-210ENST00000600097 LOC102724428A0A0B4J2F2 783 aa23.75■■□□□ 1.39
SMG9-210ENST00000600097 SIK1P57059 783 aa23.75■■□□□ 1.39
SMG9-210ENST00000600097 TMOD3Q9NYL9 352 aa23.75■■□□□ 1.39
SMG9-210ENST00000600097 POLKQ9UBT6 870 aa23.75■■□□□ 1.39
SMG9-210ENST00000600097 ANKRD26Q9UPS8 1709 aa23.75■■□□□ 1.39
SMG9-210ENST00000600097 ITGB4P16144 1822 aa23.75■■□□□ 1.39
SMG9-210ENST00000600097 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.74■■□□□ 1.39
SMG9-210ENST00000600097 SSFA2P28290 1259 aa23.74■■□□□ 1.39
SMG9-210ENST00000600097 IFNL2Q8IZJ0 200 aa23.74■■□□□ 1.39
SMG9-210ENST00000600097 PHF14O94880 888 aa23.73■■□□□ 1.39
SMG9-210ENST00000600097 PHKG2P15735 406 aa23.72■■□□□ 1.39
SMG9-210ENST00000600097 AMIGO3Q86WK7 504 aa23.72■■□□□ 1.39
SMG9-210ENST00000600097 CLSPNQ9HAW4 1339 aa23.72■■□□□ 1.39
SMG9-210ENST00000600097 PLEKHG2Q9H7P9 1386 aa23.72■■□□□ 1.39
SMG9-210ENST00000600097 LINC00116Q8NCU8 138 aa23.7■■□□□ 1.38
SMG9-210ENST00000600097 ASAP1Q9ULH1 1129 aa23.7■■□□□ 1.38
SMG9-210ENST00000600097 MAP2P11137 1827 aaKnown RBP23.68■■□□□ 1.38
SMG9-210ENST00000600097 ATP6V1AP38606 617 aa23.68■■□□□ 1.38
SMG9-210ENST00000600097 EIF4A2Q14240 407 aaKnown RBP23.68■■□□□ 1.38
SMG9-210ENST00000600097 POLR3GLQ9BT43 218 aa23.68■■□□□ 1.38
SMG9-210ENST00000600097 UBR3Q6ZT12 1888 aa23.68■■□□□ 1.38
SMG9-210ENST00000600097 GNPATO15228 680 aa23.67■■□□□ 1.38
SMG9-210ENST00000600097 TNNT2P45379 298 aaPredicted RBP23.66■■□□□ 1.38
SMG9-210ENST00000600097 ITPK1Q13572 414 aa23.66■■□□□ 1.38
SMG9-210ENST00000600097 SMIM5Q71RC9 77 aa23.66■■□□□ 1.38
SMG9-210ENST00000600097 ATG3Q9NT62 314 aa23.66■■□□□ 1.38
SMG9-210ENST00000600097 ATP10DQ9P241 1426 aa23.66■■□□□ 1.38
SMG9-210ENST00000600097 IGSF1Q8N6C5 1336 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms