RNA–Protein interactions for RNA: ENST00000600018.1

SAMD4B-210, Transcript of sterile alpha motif domain containing 4B, humanhuman

TSL 5

Gene SAMD4B, Length 144 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4B-210ENST00000600018 SPATA31A1Q5TZJ5 1347 aa6.86□□□□□ -1.31
SAMD4B-210ENST00000600018 SPATA31A5Q5VU36 1347 aa6.86□□□□□ -1.31
SAMD4B-210ENST00000600018 SPATA31A7Q8IWB4 1347 aa6.86□□□□□ -1.31
SAMD4B-210ENST00000600018 HSP90AB1P08238 724 aaKnown RBP6.86□□□□□ -1.31
SAMD4B-210ENST00000600018 IL2RBP14784 551 aa6.86□□□□□ -1.31
SAMD4B-210ENST00000600018 TATP17735 454 aaPredicted RBP6.86□□□□□ -1.31
SAMD4B-210ENST00000600018 BARGINQ6ZT62 677 aa6.86□□□□□ -1.31
SAMD4B-210ENST00000600018 GLI3P10071 1580 aa6.86□□□□□ -1.31
SAMD4B-210ENST00000600018 MAP3K5Q99683 1374 aa6.85□□□□□ -1.31
SAMD4B-210ENST00000600018 ZBED9Q6R2W3 1325 aa6.85□□□□□ -1.31
SAMD4B-210ENST00000600018 HMOX1P09601 288 aa6.85□□□□□ -1.31
SAMD4B-210ENST00000600018 CCDC27Q2M243 656 aa6.85□□□□□ -1.31
SAMD4B-210ENST00000600018 CCDC184Q52MB2 194 aa6.85□□□□□ -1.31
SAMD4B-210ENST00000600018 PLEKHO1Q53GL0 409 aaPredicted RBP6.85□□□□□ -1.31
SAMD4B-210ENST00000600018 C1orf141Q5JVX7 400 aa6.85□□□□□ -1.31
SAMD4B-210ENST00000600018 NBPF6Q5VWK0 638 aa6.85□□□□□ -1.31
SAMD4B-210ENST00000600018 LARP1Q6PKG0 1096 aaKnown RBP6.85□□□□□ -1.31
SAMD4B-210ENST00000600018 NBPF4Q96M43 638 aa6.85□□□□□ -1.31
SAMD4B-210ENST00000600018 PLEKHF1Q96S99 279 aa6.85□□□□□ -1.31
SAMD4B-210ENST00000600018 CCDC9Q9Y3X0 531 aaKnown RBP6.85□□□□□ -1.31
SAMD4B-210ENST00000600018 HTATSF1O43719 755 aaKnown RBP6.84□□□□□ -1.31
SAMD4B-210ENST00000600018 HNRNPUQ00839 825 aaKnown RBP eCLIP6.84□□□□□ -1.31
SAMD4B-210ENST00000600018 NFE2L2Q16236 605 aa6.84□□□□□ -1.31
SAMD4B-210ENST00000600018 RTF1Q92541 710 aaKnown RBP6.84□□□□□ -1.31
SAMD4B-210ENST00000600018 PHF23Q9BUL5 403 aaPredicted RBP6.84□□□□□ -1.31
SAMD4B-210ENST00000600018 SIPA1L3O60292 1781 aaPredicted RBP6.84□□□□□ -1.31
SAMD4B-210ENST00000600018 MRC1P22897 1456 aa6.84□□□□□ -1.31
SAMD4B-210ENST00000600018 TMPOP42166 694 aaKnown RBP6.83□□□□□ -1.32
SAMD4B-210ENST00000600018 PDE3BQ13370 1112 aa6.83□□□□□ -1.32
SAMD4B-210ENST00000600018 AKAP4Q5JQC9 854 aa6.83□□□□□ -1.32
SAMD4B-210ENST00000600018 AEBP1Q8IUX7 1158 aa6.83□□□□□ -1.32
SAMD4B-210ENST00000600018 GJD4Q96KN9 370 aaPredicted RBP6.83□□□□□ -1.32
SAMD4B-210ENST00000600018 DOT1LQ8TEK3 1739 aa6.83□□□□□ -1.32
SAMD4B-210ENST00000600018 GNAT3A8MTJ3 354 aa6.82□□□□□ -1.32
SAMD4B-210ENST00000600018 RBM6P78332 1123 aaKnown RBP6.82□□□□□ -1.32
SAMD4B-210ENST00000600018 ZNF530Q6P9A1 599 aaPredicted RBP6.82□□□□□ -1.32
SAMD4B-210ENST00000600018 CCDC146Q8IYE0 955 aa6.82□□□□□ -1.32
SAMD4B-210ENST00000600018 IFNL2Q8IZJ0 200 aa6.82□□□□□ -1.32
SAMD4B-210ENST00000600018 USHBP1Q8N6Y0 703 aa6.82□□□□□ -1.32
SAMD4B-210ENST00000600018 USP35Q9P2H5 1018 aa6.82□□□□□ -1.32
SAMD4B-210ENST00000600018 ITGB4P16144 1822 aa6.82□□□□□ -1.32
SAMD4B-210ENST00000600018 BCL9O00512 1426 aa6.82□□□□□ -1.32
SAMD4B-210ENST00000600018 CACNA1FO60840 1977 aa6.82□□□□□ -1.32
SAMD4B-210ENST00000600018 KAT6BQ8WYB5 2073 aa6.81□□□□□ -1.32
SAMD4B-210ENST00000600018 IL16Q14005 1332 aa6.81□□□□□ -1.32
SAMD4B-210ENST00000600018 NHSQ6T4R5 1651 aa6.81□□□□□ -1.32
SAMD4B-210ENST00000600018 BRWD3Q6RI45 1802 aa6.81□□□□□ -1.32
SAMD4B-210ENST00000600018 PAPPAQ13219 1627 aa6.81□□□□□ -1.32
SAMD4B-210ENST00000600018 A0A0G2JS52 829 aa6.81□□□□□ -1.32
SAMD4B-210ENST00000600018 EXOC5O00471 708 aa6.81□□□□□ -1.32
SAMD4B-210ENST00000600018 APAF1O14727 1248 aa6.81□□□□□ -1.32
SAMD4B-210ENST00000600018 RIPK4P57078 832 aa6.81□□□□□ -1.32
SAMD4B-210ENST00000600018 MYT1Q01538 1121 aa6.81□□□□□ -1.32
SAMD4B-210ENST00000600018 DDB1Q16531 1140 aa6.81□□□□□ -1.32
SAMD4B-210ENST00000600018 WDR63Q8IWG1 891 aa6.81□□□□□ -1.32
SAMD4B-210ENST00000600018 ZCRB1Q8TBF4 217 aaKnown RBP6.81□□□□□ -1.32
SAMD4B-210ENST00000600018 DCAF5Q96JK2 942 aa6.81□□□□□ -1.32
SAMD4B-210ENST00000600018 KDM3BQ7LBC6 1761 aa6.81□□□□□ -1.32
SAMD4B-210ENST00000600018 CEMIPQ8WUJ3 1361 aa6.81□□□□□ -1.32
SAMD4B-210ENST00000600018 SBF2Q86WG5 1849 aa6.8□□□□□ -1.32
SAMD4B-210ENST00000600018 RGPD3A6NKT7 1758 aaPredicted RBP6.8□□□□□ -1.32
SAMD4B-210ENST00000600018 RGPD4Q7Z3J3 1758 aa6.8□□□□□ -1.32
SAMD4B-210ENST00000600018 UBR2Q8IWV8 1755 aa6.8□□□□□ -1.32
SAMD4B-210ENST00000600018 ONECUT3O60422 494 aaPredicted RBP6.8□□□□□ -1.32
SAMD4B-210ENST00000600018 MTHFSDQ2M296 383 aaKnown RBP6.8□□□□□ -1.32
SAMD4B-210ENST00000600018 PHACTR3Q96KR7 559 aa6.8□□□□□ -1.32
SAMD4B-210ENST00000600018 CHMP4AQ9BY43 222 aa6.8□□□□□ -1.32
SAMD4B-210ENST00000600018 MYH16Q9H6N6 1097 aa6.8□□□□□ -1.32
SAMD4B-210ENST00000600018 QTRT2Q9H974 415 aaKnown RBP6.8□□□□□ -1.32
SAMD4B-210ENST00000600018 BABAM1Q9NWV8 329 aa6.8□□□□□ -1.32
SAMD4B-210ENST00000600018 TOGARAM1Q9Y4F4 1720 aa6.8□□□□□ -1.32
SAMD4B-210ENST00000600018 ZNF831Q5JPB2 1677 aa6.8□□□□□ -1.32
SAMD4B-210ENST00000600018 LAMB4A4D0S4 1761 aa6.8□□□□□ -1.32
SAMD4B-210ENST00000600018 CICQ96RK0 1608 aaPredicted RBP6.79□□□□□ -1.32
SAMD4B-210ENST00000600018 E9PSI1 815 aa6.79□□□□□ -1.32
SAMD4B-210ENST00000600018 PHKG2P15735 406 aa6.79□□□□□ -1.32
SAMD4B-210ENST00000600018 HMGB2P26583 209 aaKnown RBP6.79□□□□□ -1.32
SAMD4B-210ENST00000600018 RXRBP28702 533 aa6.79□□□□□ -1.32
SAMD4B-210ENST00000600018 GOLGA2Q08379 1002 aa6.79□□□□□ -1.32
SAMD4B-210ENST00000600018 TEFQ10587 303 aa6.79□□□□□ -1.32
SAMD4B-210ENST00000600018 NKX1-1Q15270 411 aaPredicted RBP6.79□□□□□ -1.32
SAMD4B-210ENST00000600018 FAM98CQ17RN3 349 aaKnown RBP6.79□□□□□ -1.32
SAMD4B-210ENST00000600018 ILDR1Q86SU0 546 aaPredicted RBP6.79□□□□□ -1.32
SAMD4B-210ENST00000600018 WWC1Q8IX03 1113 aa6.79□□□□□ -1.32
SAMD4B-210ENST00000600018 SOS1Q07889 1333 aaPredicted RBP6.78□□□□□ -1.32
SAMD4B-210ENST00000600018 ZNF521Q96K83 1311 aa6.78□□□□□ -1.32
SAMD4B-210ENST00000600018 KDM6AO15550 1401 aaPredicted RBP6.78□□□□□ -1.32
SAMD4B-210ENST00000600018 ERVV-2B6SEH9 535 aa6.78□□□□□ -1.32
SAMD4B-210ENST00000600018 CENPBP07199 599 aaPredicted RBP6.78□□□□□ -1.32
SAMD4B-210ENST00000600018 GNAI1P63096 354 aa6.78□□□□□ -1.32
SAMD4B-210ENST00000600018 NEUROD2Q15784 382 aa6.78□□□□□ -1.32
SAMD4B-210ENST00000600018 IFT57Q9NWB7 429 aa6.78□□□□□ -1.32
SAMD4B-210ENST00000600018 BTAF1O14981 1849 aa6.78□□□□□ -1.32
SAMD4B-210ENST00000600018 CYP27B1O15528 508 aa6.77□□□□□ -1.33
SAMD4B-210ENST00000600018 CT47B1P0C2W7 299 aaPredicted RBP6.77□□□□□ -1.33
SAMD4B-210ENST00000600018 CFAP44Q96MT7 982 aa6.77□□□□□ -1.33
SAMD4B-210ENST00000600018 YTHDC1Q96MU7 727 aaKnown RBP6.77□□□□□ -1.33
SAMD4B-210ENST00000600018 TRIM35Q9UPQ4 493 aa6.77□□□□□ -1.33
SAMD4B-210ENST00000600018 RRP7AQ9Y3A4 280 aaKnown RBP6.77□□□□□ -1.33
SAMD4B-210ENST00000600018 RGS12O14924 1447 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms