RNA–Protein interactions for RNA: ENST00000599938.5

ZNF558-206, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-206ENST00000599938 DDX54Q8TDD1 881 aaKnown RBP38.48■■■■□ 3.75
ZNF558-206ENST00000599938 ZCRB1Q8TBF4 217 aaKnown RBP38.45■■■■□ 3.75
ZNF558-206ENST00000599938 ACSBG1Q96GR2 724 aa38.45■■■■□ 3.75
ZNF558-206ENST00000599938 NCAPD2Q15021 1401 aa38.45■■■■□ 3.75
ZNF558-206ENST00000599938 TATP17735 454 aaPredicted RBP38.44■■■■□ 3.74
ZNF558-206ENST00000599938 KAT6BQ8WYB5 2073 aa38.43■■■■□ 3.74
ZNF558-206ENST00000599938 KCNQ2O43526 872 aa38.42■■■■□ 3.74
ZNF558-206ENST00000599938 PLSCR1O15162 318 aa38.41■■■■□ 3.74
ZNF558-206ENST00000599938 PER1O15534 1290 aaPredicted RBP38.41■■■■□ 3.74
ZNF558-206ENST00000599938 PSDA5PKW4 1024 aaPredicted RBP38.4■■■■□ 3.74
ZNF558-206ENST00000599938 EIF4A2Q14240 407 aaKnown RBP38.39■■■■□ 3.74
ZNF558-206ENST00000599938 EYA1Q99502 592 aa38.38■■■■□ 3.73
ZNF558-206ENST00000599938 DOT1LQ8TEK3 1739 aa38.38■■■■□ 3.73
ZNF558-206ENST00000599938 BTAF1O14981 1849 aa38.37■■■■□ 3.73
ZNF558-206ENST00000599938 PKD1L3Q7Z443 1732 aa38.35■■■■□ 3.73
ZNF558-206ENST00000599938 CC2D1BQ5T0F9 858 aaKnown RBP38.35■■■■□ 3.73
ZNF558-206ENST00000599938 R3HDM1Q15032 1099 aaKnown RBP38.34■■■■□ 3.73
ZNF558-206ENST00000599938 PCDH11XQ9BZA7 1347 aa38.34■■■■□ 3.73
ZNF558-206ENST00000599938 PCDH11YQ9BZA8 1340 aa38.34■■■■□ 3.73
ZNF558-206ENST00000599938 NPC1L1Q9UHC9 1359 aa38.31■■■■□ 3.72
ZNF558-206ENST00000599938 NBPF14Q5TI25 921 aa38.29■■■■□ 3.72
ZNF558-206ENST00000599938 IGSF1Q8N6C5 1336 aa38.28■■■■□ 3.72
ZNF558-206ENST00000599938 SYTL4Q96C24 671 aaPredicted RBP38.27■■■■□ 3.72
ZNF558-206ENST00000599938 CNGB1Q14028 1251 aaPredicted RBP38.26■■■■□ 3.72
ZNF558-206ENST00000599938 TXNRD1Q16881 649 aa38.25■■■■□ 3.71
ZNF558-206ENST00000599938 PRIM1P49642 420 aaKnown RBP38.24■■■■□ 3.71
ZNF558-206ENST00000599938 PROM2Q8N271 834 aa38.24■■■■□ 3.71
ZNF558-206ENST00000599938 CYP27B1O15528 508 aa38.22■■■■□ 3.71
ZNF558-206ENST00000599938 SPG7Q9UQ90 795 aa38.22■■■■□ 3.71
ZNF558-206ENST00000599938 MTHFSP49914 203 aa38.2■■■■□ 3.71
ZNF558-206ENST00000599938 LRP5O75197 1615 aa38.19■■■■□ 3.7
ZNF558-206ENST00000599938 PLEKHG2Q9H7P9 1386 aa38.19■■■■□ 3.7
ZNF558-206ENST00000599938 ANO8Q9HCE9 1232 aaPredicted RBP38.18■■■■□ 3.7
ZNF558-206ENST00000599938 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP38.18■■■■□ 3.7
ZNF558-206ENST00000599938 TOGARAM1Q9Y4F4 1720 aa38.17■■■■□ 3.7
ZNF558-206ENST00000599938 IL13P35225 146 aa38.15■■■■□ 3.7
ZNF558-206ENST00000599938 AEBP1Q8IUX7 1158 aa38.12■■■■□ 3.69
ZNF558-206ENST00000599938 PAPPAQ13219 1627 aa38.12■■■■□ 3.69
ZNF558-206ENST00000599938 SULT6B1Q6IMI4 303 aa38.09■■■■□ 3.69
ZNF558-206ENST00000599938 STK32BQ9NY57 414 aa38.09■■■■□ 3.69
ZNF558-206ENST00000599938 LY75O60449 1722 aa38.09■■■■□ 3.69
ZNF558-206ENST00000599938 KDRP35968 1356 aa38.08■■■■□ 3.69
ZNF558-206ENST00000599938 ITGB4P16144 1822 aa38.08■■■■□ 3.69
ZNF558-206ENST00000599938 IFNL2Q8IZJ0 200 aa38.08■■■■□ 3.69
ZNF558-206ENST00000599938 PHKG2P15735 406 aa38.07■■■■□ 3.68
ZNF558-206ENST00000599938 NKX1-1Q15270 411 aaPredicted RBP38.07■■■■□ 3.68
ZNF558-206ENST00000599938 COL3A1P02461 1466 aaPredicted RBP38.05■■■■□ 3.68
ZNF558-206ENST00000599938 DIAPH1O60610 1272 aaKnown RBP38.04■■■■□ 3.68
ZNF558-206ENST00000599938 PLEKHO1Q53GL0 409 aaPredicted RBP38.04■■■■□ 3.68
ZNF558-206ENST00000599938 SLC27A3Q5K4L6 730 aa38.04■■■■□ 3.68
ZNF558-206ENST00000599938 MPRIPQ6WCQ1 1025 aa38.04■■■■□ 3.68
ZNF558-206ENST00000599938 LRRC4BQ9NT99 713 aa38.04■■■■□ 3.68
ZNF558-206ENST00000599938 CASZ1Q86V15 1759 aa38.02■■■■□ 3.68
ZNF558-206ENST00000599938 SLC15A2Q16348 729 aa38.02■■■■□ 3.68
ZNF558-206ENST00000599938 AMOTQ4VCS5 1084 aa38.02■■■■□ 3.68
ZNF558-206ENST00000599938 ZNF530Q6P9A1 599 aaPredicted RBP38■■■■□ 3.67
ZNF558-206ENST00000599938 PALLDQ8WX93 1383 aa37.97■■■■□ 3.67
ZNF558-206ENST00000599938 CCNL1Q9UK58 526 aaPredicted RBP37.97■■■■□ 3.67
ZNF558-206ENST00000599938 HMOX1P09601 288 aa37.96■■■■□ 3.67
ZNF558-206ENST00000599938 KCNQ4P56696 695 aa37.96■■■■□ 3.67
ZNF558-206ENST00000599938 HSP90AB1P08238 724 aaKnown RBP37.95■■■■□ 3.67
ZNF558-206ENST00000599938 ZNF827Q17R98 1081 aa37.95■■■■□ 3.67
ZNF558-206ENST00000599938 TMOD3Q9NYL9 352 aa37.95■■■■□ 3.67
ZNF558-206ENST00000599938 PIGBQ92521 554 aa37.94■■■■□ 3.66
ZNF558-206ENST00000599938 C1orf141Q5JVX7 400 aa37.93■■■■□ 3.66
ZNF558-206ENST00000599938 CFAP53Q96M91 514 aa37.92■■■■□ 3.66
ZNF558-206ENST00000599938 PDGFDQ9GZP0 370 aaPredicted RBP37.92■■■■□ 3.66
ZNF558-206ENST00000599938 KDM6AO15550 1401 aaPredicted RBP37.91■■■■□ 3.66
ZNF558-206ENST00000599938 PPP2R1AP30153 589 aa37.91■■■■□ 3.66
ZNF558-206ENST00000599938 SMARCC1Q92922 1105 aaPredicted RBP37.91■■■■□ 3.66
ZNF558-206ENST00000599938 DCAF5Q96JK2 942 aa37.91■■■■□ 3.66
ZNF558-206ENST00000599938 U2SURPO15042 1029 aaKnown RBP37.9■■■■□ 3.66
ZNF558-206ENST00000599938 C5P01031 1676 aa37.89■■■■□ 3.66
ZNF558-206ENST00000599938 AKT1S1Q96B36 256 aa37.88■■■■□ 3.65
ZNF558-206ENST00000599938 SPON1Q9HCB6 807 aa37.88■■■■□ 3.65
ZNF558-206ENST00000599938 QSER1Q2KHR3 1735 aa37.87■■■■□ 3.65
ZNF558-206ENST00000599938 ZEB1P37275 1124 aaPredicted RBP37.86■■■■□ 3.65
ZNF558-206ENST00000599938 TUBGCP6Q96RT7 1819 aa37.86■■■■□ 3.65
ZNF558-206ENST00000599938 ERVV-2B6SEH9 535 aa37.85■■■■□ 3.65
ZNF558-206ENST00000599938 ZBTB7AO95365 584 aa37.84■■■■□ 3.65
ZNF558-206ENST00000599938 TAF1LQ8IZX4 1826 aa37.83■■■■□ 3.65
ZNF558-206ENST00000599938 TFCP2L1Q9NZI6 479 aa37.81■■■■□ 3.64
ZNF558-206ENST00000599938 ASAP1Q9ULH1 1129 aa37.81■■■■□ 3.64
ZNF558-206ENST00000599938 AKAP4Q5JQC9 854 aa37.8■■■■□ 3.64
ZNF558-206ENST00000599938 SCN11AQ9UI33 1791 aa37.8■■■■□ 3.64
ZNF558-206ENST00000599938 CABP4P57796 275 aa37.79■■■■□ 3.64
ZNF558-206ENST00000599938 DDX10Q13206 875 aaKnown RBP37.79■■■■□ 3.64
ZNF558-206ENST00000599938 HMGB2P26583 209 aaKnown RBP37.77■■■■□ 3.64
ZNF558-206ENST00000599938 NUDCQ9Y266 331 aa37.77■■■■□ 3.64
ZNF558-206ENST00000599938 LOC102724428A0A0B4J2F2 783 aa37.76■■■■□ 3.64
ZNF558-206ENST00000599938 SIK1P57059 783 aa37.76■■■■□ 3.64
ZNF558-206ENST00000599938 MTHFSDQ2M296 383 aaKnown RBP37.76■■■■□ 3.64
ZNF558-206ENST00000599938 MTFR1LQ9H019 292 aa37.76■■■■□ 3.64
ZNF558-206ENST00000599938 ATG3Q9NT62 314 aa37.76■■■■□ 3.64
ZNF558-206ENST00000599938 PPP1R1BQ9UD71 204 aaPredicted RBP37.76■■■■□ 3.64
ZNF558-206ENST00000599938 PNPLA7Q6ZV29 1317 aa37.76■■■■□ 3.64
ZNF558-206ENST00000599938 C4BP0C0L5 1744 aa37.75■■■■□ 3.63
ZNF558-206ENST00000599938 ATF5Q9Y2D1 282 aaPredicted RBP37.74■■■■□ 3.63
ZNF558-206ENST00000599938 VIRMAQ69YN4 1812 aaKnown RBP37.73■■■■□ 3.63
ZNF558-206ENST00000599938 U2AF1L5P0DN76 240 aaPredicted RBP37.69■■■■□ 3.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms